Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGR083G0666 Punica granatum HOM05D004910 ORTHO05D006864 8.2e-270 933.3 541 100.0
Eucgr.D01069 Eucalyptus grandis HOM05D004910 ORTHO05D006864 8.2e-153 544.7 569 59.8
Atru.chr2.1650 Acer truncatum HOM05D004910 ORTHO05D006864 7.0e-144 515.0 565 57.2
QL04p053216 Quercus lobata HOM05D004910 ORTHO05D006864 7.0e-144 515.0 565 56.6
TWI34G0933 Tripterygium wilfordii HOM05D004910 ORTHO05D006864 5.0e-142 508.8 589 55.2
Thecc.05G234000 Theobroma cacao HOM05D004910 ORTHO05D006864 7.2e-141 505.0 563 57.0
Potri.013G071800 Populus trichocarpa HOM05D004910 ORTHO05D006864 3.6e-140 502.7 568 53.7
Ciclev10030475m.g Citrus clementina HOM05D004910 ORTHO05D006864 3.7e-137 492.7 564 52.8
Duzib177G0285 Durio zibethinus HOM05D004910 ORTHO05D006864 1.4e-136 490.7 567 55.4
Gohir.D11G236600 Gossypium hirsutum HOM05D004910 ORTHO05D006864 9.2e-136 488.0 559 56.7
Gorai.007G249800 Gossypium raimondii HOM05D004910 ORTHO05D006864 1.2e-135 487.6 559 56.5
Phvul.010G039700 Phaseolus vulgaris HOM05D004910 ORTHO05D006864 1.6e-135 487.3 562 54.1
Haze_15792 Corylus avellana HOM05D004910 ORTHO05D006864 5.9e-135 485.3 561 56.0
Glyma.03G099800 Glycine max HOM05D004910 ORTHO05D006864 1.1e-133 481.1 563 54.7
CANSAT25G1237 Cannabis sativa HOM05D004910 ORTHO05D006864 1.9e-133 480.3 559 56.0
Cfa003693 Carpinus fangiana HOM05D004910 ORTHO05D006864 1.9e-133 480.3 567 55.9
CSS0017393 Camellia sinensis var. sinensis HOM05D004910 ORTHO05D006864 4.4e-130 469.2 564 54.3
TAR629G2465 Trochodendron aralioides HOM05D004910 ORTHO05D006864 4.4e-130 469.2 576 53.1
Gohir.A11G225700 Gossypium hirsutum HOM05D004910 ORTHO05D006864 2.9e-129 466.5 559 56.4
Glyma.07G122900 Glycine max HOM05D004910 ORTHO05D006864 3.7e-129 466.1 563 53.1
MD07G1080500 Malus domestica HOM05D004910 ORTHO05D006864 1.4e-128 464.2 567 54.5
GSVIVG01019298001 Vitis vinifera HOM05D004910 ORTHO05D006864 1.4e-128 464.2 605 50.1
RcHm_v2.0_Chr1g0342311 Rosa chinensis HOM05D004910 ORTHO05D006864 4.1e-128 462.6 561 54.2
arahy.Tifrunner.gnm1.ann1.X9S6DI Arachis hypogaea HOM05D004910 ORTHO05D006864 4.6e-127 459.1 564 52.3
arahy.Tifrunner.gnm1.ann1.L1X5S4 Arachis hypogaea HOM05D004910 ORTHO05D006864 1.0e-126 458.0 576 51.2
TPR.G17367 Trifolium pratense HOM05D004910 ORTHO05D006864 1.5e-125 454.1 566 53.0
CiPaw.02G046700 Carya illinoinensis HOM05D004910 ORTHO05D006864 1.9e-125 453.8 526 55.7
Ca_25886_v3 Cicer arietinum L. HOM05D004910 ORTHO05D006864 5.6e-125 452.2 563 52.4
FAN10G3403 Fragaria x ananassa HOM05D004910 ORTHO05D006864 7.3e-125 451.8 565 51.9
FAN01G0980 Fragaria x ananassa HOM05D004910 ORTHO05D006864 1.8e-123 447.2 565 53.1
Nitab4.5_0000792g0070 Nicotiana tabacum HOM05D004910 ORTHO05D006864 5.2e-123 445.7 565 51.2
FAN03G0816 Fragaria x ananassa HOM05D004910 ORTHO05D006864 1.5e-122 444.1 566 52.3
COL.COLO4_08664 Corchorus olitorius HOM05D004910 ORTHO05D006864 3.4e-122 443.0 561 51.3
Lj3g0022995 Lotus japonicus HOM05D004910 ORTHO05D006864 5.8e-122 442.2 565 51.9
Nitab4.5_0006461g0010 Nicotiana tabacum HOM05D004910 ORTHO05D006864 5.8e-122 442.2 565 51.2
FvH4_7g07740 Fragaria vesca HOM05D004910 ORTHO05D006864 2.9e-121 439.9 565 52.0
Medtr8g009780 Medicago truncatula HOM05D004910 ORTHO05D006864 2.9e-121 439.9 563 51.7
FAN06G0636 Fragaria x ananassa HOM05D004910 ORTHO05D006864 4.9e-121 439.1 565 51.9
CAN.G992.20 Capsicum annuum HOM05D004910 ORTHO05D006864 2.0e-119 433.7 561 51.2
VMungo0331G1962 Vigna mungo HOM05D004910 ORTHO05D006864 4.6e-119 432.6 563 51.0
SalBow4G1969 Salvia bowleyana HOM05D004910 ORTHO05D006864 6.6e-118 428.7 564 50.5
EL10Ac1g00665 Beta vulgaris HOM05D004910 ORTHO05D006864 3.6e-116 422.9 557 51.0
Lalb_Chr07g0194851 Lupinus albus HOM05D004910 ORTHO05D006864 3.6e-116 422.9 563 50.6
PSO063G6831 Papaver somniferum HOM05D004910 ORTHO05D006864 6.2e-116 422.2 580 51.0
MELO3C006215.2 Cucumis melo HOM05D004910 ORTHO05D006864 8.1e-116 421.8 568 51.1
Manes.08G157000 Manihot esculenta HOM05D004910 ORTHO05D006864 2.0e-114 417.2 567 52.2
Cc08_g05600 Coffea canephora HOM05D004910 ORTHO05D006864 3.4e-114 416.4 563 48.0
Prupe.2G105000 Prunus persica HOM05D004910 ORTHO05D006864 3.4e-114 416.4 567 52.0
Sed0008127 Sechium edule HOM05D004910 ORTHO05D006864 7.5e-114 415.2 569 51.1
Solyc01g081430.4 Solanum lycopersicum HOM05D004910 ORTHO05D006864 1.9e-112 410.6 561 50.6
AUR62038026 Chenopodium quinoa HOM05D004910 ORTHO05D006864 2.4e-112 410.2 549 49.5
CsaV3_3G009930 Cucumis sativus L. HOM05D004910 ORTHO05D006864 7.1e-112 408.7 568 50.5
CARHR216720 Cardamine hirsuta HOM05D004910 ORTHO05D006864 1.2e-111 407.9 540 49.1
Aqoxy3G02002 Aquilegia oxysepala HOM05D004910 ORTHO05D006864 1.6e-111 407.5 575 47.8
PSO782G5450 Papaver somniferum HOM05D004910 ORTHO05D006864 1.9e-109 400.6 578 49.3
Sopen01g032990 Solanum pennellii HOM05D004910 ORTHO05D006864 7.3e-109 398.7 560 49.6
MBI04_g30775_MAGBIO Magnolia biondii HOM05D004910 ORTHO05D006864 1.2e-108 397.9 573 48.2
Peaxi162Scf00907g00121 Petunia axillaris HOM05D004910 ORTHO05D006864 2.8e-108 396.7 594 47.3
DCAR_029567 Daucus carota HOM05D004910 ORTHO05D006864 1.4e-107 394.4 562 47.2
Sc26g0002020 Simmondsia chinensis HOM05D004910 ORTHO05D006864 1.4e-107 394.4 542 50.0
arahy.Tifrunner.gnm1.ann1.7UUD9R Arachis hypogaea HOM05D004910 ORTHO05D006864 2.6e-106 390.2 473 52.0
SGA_v2.0_scaffold4G02226 Striga asiatica HOM05D004910 ORTHO05D006864 4.4e-106 389.4 563 48.0
Oeu002050.1 Olea europaea HOM05D004910 ORTHO05D006864 1.1e-104 384.8 568 46.7
THA.LOC104805731 Tarenaya hassleriana HOM05D004910 ORTHO05D006864 1.1e-104 384.8 550 48.2
AUR62014509 Chenopodium quinoa HOM05D004910 ORTHO05D006864 7.8e-103 378.6 549 48.1
Hund26917 Selenicereus undatus HOM05D004910 ORTHO05D006864 1.1e-101 374.8 553 47.9
Lsat_1_v5_gn_4_42261 Lactuca sativa HOM05D004910 ORTHO05D006864 1.5e-101 374.4 565 44.8
Lj9A617T56 Lonicera japonica HOM05D004910 ORTHO05D006864 2.4e-99 367.1 405 54.8
ECA234G3354 Erigeron canadensis HOM05D004910 ORTHO05D006864 2.2e-97 360.5 564 45.2
ClCG05G002500 Citrullus lanatus HOM05D004910 ORTHO05D006864 4.9e-97 359.4 568 45.6
HanXRQChr15g0492621 Helianthus annuus HOM05D004910 ORTHO05D006864 6.4e-97 359.0 531 44.1
AL7G44770 Arabidopsis lyrata HOM05D004910 ORTHO05D006864 4.2e-96 356.3 542 48.2
Rhsim07G0047300 Rhododendron simsii HOM05D004910 ORTHO05D006864 1.2e-95 354.8 406 51.7
Aa31LG9G17970 Aethionema arabicum HOM05D004910 ORTHO05D006864 1.0e-94 351.7 593 44.0
Migut.N01670 Erythranthe guttata HOM05D004910 ORTHO05D006864 8.7e-94 348.6 550 45.5
Dinv43524 Davidia involucrata HOM05D004910 ORTHO05D006864 4.0e-91 339.7 544 47.8
Ah.05g177140 Amaranthus hybridus HOM05D004910 ORTHO05D006864 1.5e-90 337.8 555 42.0
Actinidia21200 Actinidia chinensis HOM05D004910 ORTHO05D006864 2.4e-88 330.5 343 55.4
vmacro13594 Vaccinium macrocarpon HOM05D004910 ORTHO05D006864 3.5e-71 273.5 321 48.6
Psat4g216280 Pisum sativum HOM05D004910 ORTHO05D006864 2.5e-56 224.2 244 51.2
Zm00001eb025470 Zea mays HOM05D004910 ORTHO05D006864 6.1e-55 219.5 363 37.5
CDE12G0963 Ceratophyllum demersum HOM05D004910 ORTHO05D006864 3.7e-52 210.3 375 48.5
Mapoly0032s0018 Marchantia polymorpha HOM05D004910 ORTHO05D006864 4.8e-52 209.9 592 37.3
ATR0829G021 Amborella trichopoda HOM05D004910 ORTHO05D006864 2.6e-50 204.1 566 36.4
Psat4g216320 Pisum sativum HOM05D004910 ORTHO05D006864 3.2e-48 197.2 300 51.7
Cpa.g.sc73.57 Carica papaya HOM05D004910 ORTHO05D006864 1.7e-44 184.9 362 40.9
Pp3c7_26820 Physcomitrium patens HOM05D004910 ORTHO05D006864 3.3e-37 160.6 428 36.0
SEGI_03249 Sequoiadendron giganteum HOM05D004910 ORTHO05D006864 5.9e-34 149.8 243 38.7
Os10g0581000 Oryza sativa ssp. japonica HOM05D004910 ORTHO05D006864 9.4e-32 142.5 321 47.4
CDE12G0362 Ceratophyllum demersum HOM05D004910 ORTHO05D006864 2.0e-29 134.8 173 45.1
Os04g0218701 Oryza sativa ssp. japonica HOM05D004910 ORTHO05D006864 9.1e-27 125.9 361 41.8
FvH4_1g21580 Fragaria vesca HOM05D004910 ORTHO05D045425 1.7e-25 121.7 136 50.0
vmacro13596 Vaccinium macrocarpon HOM05D004910 ORTHO05D006864 7.2e-24 116.3 165 48.5
AagrBONN_evm.TU.Sc2ySwM_362.1947 Anthoceros agrestis HOM05D004910 ORTHO05D006864 2.1e-23 114.8 253 31.2
PGSC0003DMG400031109 Solanum tuberosum HOM05D004910 ORTHO05D006864 8.0e-23 112.8 213 42.3
CBR_g49462 Chara braunii HOM05D004910 ORTHO05D006864 4.0e-22 110.5 490 26.9
Rhsim07G0047400 Rhododendron simsii HOM05D004910 ORTHO05D006864 1.2e-21 109.0 165 46.7
Lj9A617T57 Lonicera japonica HOM05D004910 ORTHO05D006864 2.5e-16 91.3 129 51.2
vmacro13595 Vaccinium macrocarpon HOM05D004910 ORTHO05D006864 3.4e-13 80.9 78 78.2
SMO347G0286 Selaginella moellendorffii HOM05D004910 ORTHO05D006864 2.9e-12 77.8 167 33.5
FAN23G3082 Fragaria x ananassa HOM05D004910 ORTHO05D045425 1.0e-09 69.3 66 57.6
SEGI_03420 Sequoiadendron giganteum HOM05D004910 ORTHO05D006864 1.2e-07 62.4 180 35.6


User provided reference genes

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