Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGR083G0615 Punica granatum HOM05D005932 ORTHO05D006213 2.4e-73 278.9 155 100.0
Eucgr.D00169 Eucalyptus grandis HOM05D005932 ORTHO05D006213 1.0e-15 87.4 121 47.9
CANSAT35G0096 Cannabis sativa HOM05D005932 ORTHO05D006213 2.8e-13 79.3 160 43.1
Atru.chr10.845 Acer truncatum HOM05D005932 ORTHO05D006213 1.8e-12 76.6 129 41.9
MELO3C007074.2 Cucumis melo HOM05D005932 ORTHO05D006213 3.1e-12 75.9 130 40.8
FAN21G2441 Fragaria x ananassa HOM05D005932 ORTHO05D006213 4.1e-12 75.5 130 40.8
FAN11G2171 Fragaria x ananassa HOM05D005932 ORTHO05D006213 9.0e-12 74.3 117 46.2
Prupe.4G090500 Prunus persica HOM05D005932 ORTHO05D006213 1.2e-11 73.9 132 42.4
FvH4_3g10110 Fragaria vesca HOM05D005932 ORTHO05D006213 1.5e-11 73.6 135 45.2
Eucgr.D00155 Eucalyptus grandis HOM05D005932 ORTHO05D006213 4.5e-11 72.0 135 42.2
Hma1.2p1_0067F.1_g037010 Hydrangea macrophylla HOM05D005932 ORTHO05D006213 1.3e-10 70.5 116 41.4
Manes.14G123400 Manihot esculenta HOM05D005932 ORTHO05D006213 1.7e-10 70.1 123 34.1
MD10G1253000 Malus domestica HOM05D005932 ORTHO05D006213 5.0e-10 68.6 140 42.1
BraA03t14366Z Brassica rapa HOM05D005932 ORTHO05D006213 8.5e-10 67.8 127 36.2
Dinv10792 Davidia involucrata HOM05D005932 ORTHO05D006213 1.4e-09 67.0 96 45.8
Manes.06G068200 Manihot esculenta HOM05D005932 ORTHO05D006213 1.4e-09 67.0 124 43.5
DCAR_003852 Daucus carota HOM05D005932 ORTHO05D006213 1.9e-09 66.6 136 36.0
COL.COLO4_26835 Corchorus olitorius HOM05D005932 ORTHO05D006213 2.5e-09 66.2 118 38.1
TAR626G0301 Trochodendron aralioides HOM05D005932 ORTHO05D006213 2.5e-09 66.2 127 37.8
unitig_37.g12073 Utricularia gibba HOM05D005932 ORTHO05D006213 2.5e-09 66.2 133 36.1
Duzib235G1239 Durio zibethinus HOM05D005932 ORTHO05D006213 3.2e-09 65.9 126 39.7
RcHm_v2.0_Chr5g0016051 Rosa chinensis HOM05D005932 ORTHO05D006213 3.2e-09 65.9 135 42.2
Gohir.A03G081000 Gossypium hirsutum HOM05D005932 ORTHO05D006213 4.2e-09 65.5 125 38.4
C07p51350 Brassica napus HOM05D005932 ORTHO05D006213 5.5e-09 65.1 122 33.6
Cfa000817 Carpinus fangiana HOM05D005932 ORTHO05D006213 5.5e-09 65.1 120 47.5
Sed0018131 Sechium edule HOM05D005932 ORTHO05D006213 5.5e-09 65.1 130 36.9
CiPaw.09G141700 Carya illinoinensis HOM05D005932 ORTHO05D006213 9.4e-09 64.3 127 35.4
Gohir.D02G103800 Gossypium hirsutum HOM05D005932 ORTHO05D006213 9.4e-09 64.3 125 37.6
TWI15G0856 Tripterygium wilfordii HOM05D005932 ORTHO05D006213 1.2e-08 63.9 112 39.3
TWI38G2281 Tripterygium wilfordii HOM05D005932 ORTHO05D006213 1.2e-08 63.9 130 37.7
Migut.M01897 Erythranthe guttata HOM05D005932 ORTHO05D006213 1.6e-08 63.5 121 35.5
Gorai.005G117900 Gossypium raimondii HOM05D005932 ORTHO05D006213 1.6e-08 63.5 125 37.6
Rhsim02G0161400 Rhododendron simsii HOM05D005932 ORTHO05D006213 1.6e-08 63.5 112 34.8
BcaC06g30675 Brassica carinata HOM05D005932 ORTHO05D006213 3.6e-08 62.4 127 33.1
A03p52900 Brassica napus HOM05D005932 ORTHO05D006213 3.6e-08 62.4 127 34.6
ClCG01G025150 Citrullus lanatus HOM05D005932 ORTHO05D006213 3.6e-08 62.4 117 36.8
Haze_05823 Corylus avellana HOM05D005932 ORTHO05D006213 3.6e-08 62.4 127 45.7
Nitab4.5_0005178g0030 Nicotiana tabacum HOM05D005932 ORTHO05D006213 3.6e-08 62.4 137 35.8
Peaxi162Scf00395g00004 Petunia axillaris HOM05D005932 ORTHO05D006213 3.6e-08 62.4 140 33.6
Sed0022461 Sechium edule HOM05D005932 ORTHO05D006213 3.6e-08 62.4 134 35.8
Actinidia31387 Actinidia chinensis HOM05D005932 ORTHO05D006213 4.6e-08 62.0 109 34.9
Ca_17852_v3 Cicer arietinum L. HOM05D005932 ORTHO05D006213 4.6e-08 62.0 131 35.1
ClCG03G006250 Citrullus lanatus HOM05D005932 ORTHO05D006213 4.6e-08 62.0 140 36.4
BcaNung00838 Brassica carinata HOM05D005932 ORTHO05D006213 6.1e-08 61.6 122 32.0
BcaNung00840 Brassica carinata HOM05D005932 ORTHO05D006213 6.1e-08 61.6 122 32.0
BolC7t45634H Brassica oleracea HOM05D005932 ORTHO05D006213 6.1e-08 61.6 122 32.0
Glyma.05G166000 Glycine max HOM05D005932 ORTHO05D006213 6.1e-08 61.6 111 40.5
MD05G1272900 Malus domestica HOM05D005932 ORTHO05D006213 6.1e-08 61.6 129 41.9
Potri.011G095000 Populus trichocarpa HOM05D005932 ORTHO05D006213 6.1e-08 61.6 135 36.3
PGSC0003DMG400011812 Solanum tuberosum HOM05D005932 ORTHO05D006213 6.1e-08 61.6 121 37.2
SGA_v2.0_scaffold223G42865 Striga asiatica HOM05D005932 ORTHO05D006213 7.9e-08 61.2 126 39.7
VMungo0540G1966 Vigna mungo HOM05D005932 ORTHO05D006213 7.9e-08 61.2 129 35.7
Migut.H01328 Erythranthe guttata HOM05D005932 ORTHO05D006213 1.0e-07 60.8 133 35.3
Phvul.002G246500 Phaseolus vulgaris HOM05D005932 ORTHO05D006213 1.4e-07 60.5 129 36.4
Gohir.A10G004200 Gossypium hirsutum HOM05D005932 ORTHO05D006213 1.8e-07 60.1 127 40.2
CSS0012768 Camellia sinensis var. sinensis HOM05D005932 ORTHO05D006213 2.3e-07 59.7 138 30.4
Gohir.D10G004200 Gossypium hirsutum HOM05D005932 ORTHO05D006213 2.3e-07 59.7 118 42.4
VMungo0251G2717 Vigna mungo HOM05D005932 ORTHO05D006213 2.3e-07 59.7 127 36.2
Sabra11G0088800 Salix brachista HOM05D005932 ORTHO05D006213 3.0e-07 59.3 161 34.8
Solyc02g024010.1 Solanum lycopersicum HOM05D005932 ORTHO05D006213 3.0e-07 59.3 130 33.1
Sopen02g006750 Solanum pennellii HOM05D005932 ORTHO05D006213 3.0e-07 59.3 130 33.8
Nitab4.5_0004734g0050 Nicotiana tabacum HOM05D005932 ORTHO05D006213 3.9e-07 58.9 118 39.0
Thecc.06G002100 Theobroma cacao HOM05D005932 ORTHO05D006213 3.9e-07 58.9 113 37.2
Sed0024512 Sechium edule HOM05D005932 ORTHO05D006213 5.1e-07 58.5 139 34.5
SGA_v2.0_scaffold1G00270 Striga asiatica HOM05D005932 ORTHO05D006213 6.7e-07 58.2 128 35.2
MSTRG.13271 Avicennia marina HOM05D005932 ORTHO05D006213 8.8e-07 57.8 141 29.8
MSTRG.16291 Avicennia marina HOM05D005932 ORTHO05D006213 8.8e-07 57.8 113 37.2
Gorai.011G004600 Gossypium raimondii HOM05D005932 ORTHO05D006213 8.8e-07 57.8 118 40.7
Manes.05G115000 Manihot esculenta HOM05D005932 ORTHO05D006213 8.8e-07 57.8 132 34.1
Sp7g19900 Schrenkiella parvula HOM05D005932 ORTHO05D006213 8.8e-07 57.8 133 35.3
Eucgr.D00126 Eucalyptus grandis HOM05D005932 ORTHO05D006213 2.0e-06 56.6 130 41.5
ECA238G1329 Erigeron canadensis HOM05D005932 ORTHO05D006213 3.3e-06 55.8 104 37.5
SalBow8G0055 Salvia bowleyana HOM05D005932 ORTHO05D006213 5.7e-06 55.1 128 39.8
TWI63G1224 Tripterygium wilfordii HOM05D005932 ORTHO05D006213 5.7e-06 55.1 104 40.4
Lsat_1_v5_gn_2_93200 Lactuca sativa HOM05D005932 ORTHO05D006213 7.4e-06 54.7 111 33.3
Lj6g0008899 Lotus japonicus HOM05D005932 ORTHO05D006213 7.4e-06 54.7 104 37.5
Medtr8g088330 Medicago truncatula HOM05D005932 ORTHO05D006213 7.4e-06 54.7 114 34.2
unitig_92.g28172 Utricularia gibba HOM05D005932 ORTHO05D006213 7.4e-06 54.7 106 35.8
Lalb_Chr18g0057981 Lupinus albus HOM05D005932 ORTHO05D006213 9.7e-06 54.3 109 35.8


User provided reference genes

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