Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGR083G0613 Punica granatum HOM05D006839 ORTHO05D007872 3.8e-81 304.7 144 100.0
PGR031G1999 Punica granatum HOM05D006839 ORTHO05D007872 1.8e-14 83.2 109 35.8
PGR119G1259 Punica granatum HOM05D006839 ORTHO05D007872 2.6e-13 79.3 113 37.2
Nitab4.5_0006691g0070 Nicotiana tabacum HOM05D006839 ORTHO05D007872 9.9e-13 77.4 113 37.2
Nitab4.5_0009973g0050 Nicotiana tabacum HOM05D006839 ORTHO05D007872 4.9e-12 75.1 113 36.3
Glyma.10G025800 Glycine max HOM05D006839 ORTHO05D007872 6.4e-12 74.7 130 33.8
RcHm_v2.0_Chr6g0291211 Rosa chinensis HOM05D006839 ORTHO05D007872 1.1e-11 73.9 128 33.6
CAN.G619.36 Capsicum annuum HOM05D006839 ORTHO05D007872 2.4e-11 72.8 114 33.3
Gorai.007G136000 Gossypium raimondii HOM05D006839 ORTHO05D007872 3.2e-11 72.4 136 34.6
Phvul.007G171000 Phaseolus vulgaris HOM05D006839 ORTHO05D007872 3.2e-11 72.4 130 33.8
Eucgr.H01539 Eucalyptus grandis HOM05D006839 ORTHO05D007872 5.4e-11 71.6 128 32.0
FvH4_2g23730 Fragaria vesca HOM05D006839 ORTHO05D007872 5.4e-11 71.6 128 31.2
Gohir.D11G127300 Gossypium hirsutum HOM05D006839 ORTHO05D007872 5.4e-11 71.6 136 34.6
Gohir.D11G127350 Gossypium hirsutum HOM05D006839 ORTHO05D007872 5.4e-11 71.6 136 34.6
AagrBONN_evm.TU.Sc2ySwM_344.1627 Anthoceros agrestis HOM05D032606 ORTHO05D007872 9.3e-11 70.9 110 33.6
Gohir.A11G122100 Gossypium hirsutum HOM05D006839 ORTHO05D007872 9.3e-11 70.9 136 33.1
Prupe.8G242500 Prunus persica HOM05D006839 ORTHO05D007872 9.3e-11 70.9 134 32.1
Solyc04g026140.1 Solanum lycopersicum HOM05D006839 ORTHO05D007872 1.2e-10 70.5 128 33.6
VMungo0720G2173 Vigna mungo HOM05D006839 ORTHO05D007872 1.6e-10 70.1 143 32.2
Nitab4.5_0001028g0040 Nicotiana tabacum HOM05D006839 ORTHO05D007872 2.7e-10 69.3 134 34.3
PGSC0003DMG400046937 Solanum tuberosum HOM05D006839 ORTHO05D007872 2.7e-10 69.3 100 34.0
FAN24G3533 Fragaria x ananassa HOM05D006839 ORTHO05D007872 3.5e-10 68.9 128 30.5
PGR119G0017 Punica granatum HOM05D006839 ORTHO05D007872 6.0e-10 68.2 112 32.1
Cpa.g.sc52.24 Carica papaya HOM05D006839 ORTHO05D007872 7.9e-10 67.8 109 34.9
Cc01_g19590 Coffea canephora HOM05D006839 ORTHO05D007872 7.9e-10 67.8 142 30.3
Oeu022880.1 Olea europaea HOM05D006839 ORTHO05D007872 7.9e-10 67.8 117 33.3
SalBow4G2140 Salvia bowleyana HOM05D006839 ORTHO05D007872 7.9e-10 67.8 119 36.1
CSS0016717 Camellia sinensis var. sinensis HOM05D006839 ORTHO05D007872 1.0e-09 67.4 141 33.3
CAN.G619.35 Capsicum annuum HOM05D006839 ORTHO05D007872 1.0e-09 67.4 102 35.3
CAN.G619.39 Capsicum annuum HOM05D006839 ORTHO05D007872 1.0e-09 67.4 125 32.0
CSS0014698 Camellia sinensis var. sinensis HOM05D006839 ORTHO05D007872 1.3e-09 67.0 141 33.3
Ciclev10023291m.g Citrus clementina HOM05D006839 ORTHO05D007872 1.3e-09 67.0 111 35.1
MELO3C014411.2 Cucumis melo HOM05D006839 ORTHO05D007872 1.8e-09 66.6 133 29.3
CsaV3_6G037040 Cucumis sativus L. HOM05D006839 ORTHO05D007872 1.8e-09 66.6 133 29.3
SalBow6G6528 Salvia bowleyana HOM05D006839 ORTHO05D007872 1.8e-09 66.6 108 32.4
AagrBONN_evm.TU.Sc2ySwM_368.904 Anthoceros agrestis HOM05D032606 ORTHO05D007872 2.3e-09 66.2 108 31.5
COL.COLO4_09110 Corchorus olitorius HOM05D006839 ORTHO05D007872 2.3e-09 66.2 137 30.7
PGR083G1544 Punica granatum HOM05D006839 ORTHO05D007872 2.3e-09 66.2 132 31.1
Nitab4.5_0006691g0050 Nicotiana tabacum HOM05D006839 ORTHO05D007872 3.0e-09 65.9 100 33.0
SalBow6G2151 Salvia bowleyana HOM05D006839 ORTHO05D007872 3.0e-09 65.9 129 28.7
Solyc09g065040.1 Solanum lycopersicum HOM05D006839 ORTHO05D007872 3.0e-09 65.9 113 31.9
TAR636G2925 Trochodendron aralioides HOM05D006839 ORTHO05D007872 3.0e-09 65.9 134 30.6
Atru.chr5.1418 Acer truncatum HOM05D006839 ORTHO05D007872 3.9e-09 65.5 136 30.1
Duzib211G0653 Durio zibethinus HOM05D006839 ORTHO05D007872 3.9e-09 65.5 135 31.1
Hma1.2p1_0257F.1_g103610 Hydrangea macrophylla HOM05D000265 ORTHO05D007872 5.1e-09 65.1 129 34.1
Sopen09g026780 Solanum pennellii HOM05D006839 ORTHO05D007872 5.1e-09 65.1 113 31.9
PGSC0003DMG400039700 Solanum tuberosum HOM05D006839 ORTHO05D007872 5.1e-09 65.1 113 31.9
PGSC0003DMG402026866 Solanum tuberosum HOM05D006839 ORTHO05D007872 5.1e-09 65.1 113 31.9
ECA248G0593 Erigeron canadensis HOM05D006839 ORTHO05D007872 6.7e-09 64.7 135 31.1
AagrBONN_evm.TU.Sc2ySwM_344.1663 Anthoceros agrestis HOM05D006839 ORTHO05D007872 8.7e-09 64.3 110 32.7
Eucgr.K03376 Eucalyptus grandis HOM05D006839 ORTHO05D007872 8.7e-09 64.3 130 30.8
Nn1g02187 Nelumbo nucifera HOM05D006839 ORTHO05D007872 8.7e-09 64.3 133 28.6
vmacro14927 Vaccinium macrocarpon HOM05D000265 ORTHO05D000161 8.7e-09 64.3 111 33.3
Migut.N02163 Erythranthe guttata HOM05D006839 ORTHO05D007872 1.5e-08 63.5 108 31.5
Lj1g0018770 Lotus japonicus HOM05D006839 ORTHO05D007872 1.5e-08 63.5 111 33.3
Manes.05G075300 Manihot esculenta HOM05D006839 ORTHO05D007872 1.9e-08 63.2 131 30.5
Potri.005G208400 Populus trichocarpa HOM05D006839 ORTHO05D007872 1.9e-08 63.2 140 28.6
QL09p026146 Quercus lobata HOM05D000022 ORTHO05D000071 1.9e-08 63.2 114 28.9
PGSC0003DMG400045936 Solanum tuberosum HOM05D006839 ORTHO05D007872 1.9e-08 63.2 114 30.7
TWI73G0617 Tripterygium wilfordii HOM05D006839 ORTHO05D007872 1.9e-08 63.2 136 29.4
Eucgr.H00898 Eucalyptus grandis HOM05D006839 ORTHO05D007872 2.5e-08 62.8 136 30.1
MD11G1287200 Malus domestica HOM05D006839 ORTHO05D007872 2.5e-08 62.8 109 33.0
PGR084G0009 Punica granatum HOM05D006839 ORTHO05D007872 2.5e-08 62.8 138 34.1
PGR142G2474 Punica granatum HOM05D006839 ORTHO05D007872 2.5e-08 62.8 138 34.1
SalBow6G4286 Salvia bowleyana HOM05D006839 ORTHO05D007872 2.5e-08 62.8 96 34.4
Glyma.02G148000 Glycine max HOM05D006839 ORTHO05D007872 3.3e-08 62.4 133 30.8
SalBow6G0334 Salvia bowleyana HOM05D006839 ORTHO05D007872 3.3e-08 62.4 133 25.6
SalBow7G1292 Salvia bowleyana HOM05D006839 ORTHO05D007872 3.3e-08 62.4 113 31.0
TWI59G1109 Tripterygium wilfordii HOM05D006839 ORTHO05D007872 3.3e-08 62.4 136 30.1
Migut.D00285 Erythranthe guttata HOM05D006839 ORTHO05D007872 4.3e-08 62.0 114 32.5
Nitab4.5_0007089g0020 Nicotiana tabacum HOM05D006839 ORTHO05D007872 4.3e-08 62.0 138 31.2
TWI14G1288 Tripterygium wilfordii HOM05D006839 ORTHO05D007872 4.3e-08 62.0 136 28.7
Eucgr.A00826 Eucalyptus grandis HOM05D006839 ORTHO05D007872 5.6e-08 61.6 112 31.2
ATR0626G183 Amborella trichopoda HOM05D006839 ORTHO05D007872 7.4e-08 61.2 118 31.4
MBI19_g14316_MAGBIO Magnolia biondii HOM05D006839 ORTHO05D007872 7.4e-08 61.2 140 27.9
MBI19_g46647_MAGBIO Magnolia biondii HOM05D006839 ORTHO05D007872 7.4e-08 61.2 140 27.9
PGR031G2486 Punica granatum HOM05D023640 ORTHO05D019592 7.4e-08 61.2 106 34.0
Sed0018644 Sechium edule HOM05D006839 ORTHO05D007872 7.4e-08 61.2 68 42.6
Hma1.2p1_0089F.1_g045490 Hydrangea macrophylla HOM05D000655 ORTHO05D001166 9.6e-08 60.8 102 34.3
Haze_04725 Corylus avellana HOM05D006839 ORTHO05D007872 1.3e-07 60.5 133 28.6
Eucgr.L02237 Eucalyptus grandis HOM05D006839 ORTHO05D007872 1.3e-07 60.5 113 31.9
Lsat_1_v5_gn_5_190060 Lactuca sativa HOM05D006839 ORTHO05D007872 1.3e-07 60.5 134 32.1
PGSC0003DMG400041475 Solanum tuberosum HOM05D006839 ORTHO05D007872 1.3e-07 60.5 128 30.5
CAN.G829.10 Capsicum annuum HOM05D000655 ORTHO05D001166 2.1e-07 59.7 138 26.8
Eucgr.L02238 Eucalyptus grandis HOM05D006839 ORTHO05D007872 2.1e-07 59.7 71 42.3
Potri.011G027900 Populus trichocarpa HOM05D000022 ORTHO05D000071 2.1e-07 59.7 55 43.6
Glyma.19G155100 Glycine max HOM05D006839 ORTHO05D007872 2.8e-07 59.3 111 33.3
Phvul.001G150100 Phaseolus vulgaris HOM05D006839 ORTHO05D007872 4.8e-07 58.5 134 29.9
Aqoxy2G03292 Aquilegia oxysepala HOM05D006839 ORTHO05D007872 6.2e-07 58.2 113 30.1
PGR142G4476 Punica granatum HOM05D006839 ORTHO05D007872 6.2e-07 58.2 132 29.5
QL08p032470 Quercus lobata HOM05D000022 ORTHO05D000071 6.2e-07 58.2 81 34.6
QL05p075495 Quercus lobata HOM05D000022 ORTHO05D000071 1.1e-06 57.4 65 36.9
AagrBONN_evm.TU.Sc2ySwM_344.1661 Anthoceros agrestis HOM05D058811 ORTHO05D019592 1.4e-06 57.0 108 25.9
Gohir.A08G136100 Gossypium hirsutum HOM05D000655 ORTHO05D001166 1.8e-06 56.6 103 32.0
Lalb_Chr18g0053471 Lupinus albus HOM05D000655 ORTHO05D001166 1.8e-06 56.6 100 27.0
Gorai.004G163200 Gossypium raimondii HOM05D000655 ORTHO05D001166 2.4e-06 56.2 103 32.0
CANSAT25G2719 Cannabis sativa HOM05D000655 ORTHO05D001166 3.1e-06 55.8 100 29.0
Eucgr.A01732 Eucalyptus grandis HOM05D000022 ORTHO05D000306 3.1e-06 55.8 111 27.9
Manes.01G119300 Manihot esculenta HOM05D000655 ORTHO05D001166 3.1e-06 55.8 100 29.0
Gohir.D08G156900 Gossypium hirsutum HOM05D000655 ORTHO05D001166 4.0e-06 55.5 103 32.0
Nitab4.5_0000771g0180 Nicotiana tabacum HOM05D006839 ORTHO05D007872 4.0e-06 55.5 102 31.4
SEGI_06174 Sequoiadendron giganteum HOM05D006839 ORTHO05D007872 4.0e-06 55.5 131 27.5
HanXRQChr10g0286771 Helianthus annuus HOM05D000022 ORTHO05D000306 5.3e-06 55.1 94 34.0
EL10Ac9g22024 Beta vulgaris HOM05D000655 ORTHO05D001166 6.9e-06 54.7 118 27.1
Lj1g0001983 Lotus japonicus HOM05D000022 ORTHO05D000071 6.9e-06 54.7 118 27.1
Rhsim09G0038400 Rhododendron simsii HOM05D000655 ORTHO05D001166 6.9e-06 54.7 102 33.3
CSS0016669 Camellia sinensis var. sinensis HOM05D000022 ORTHO05D000306 9.0e-06 54.3 113 29.2
Ciclev10017818m.g Citrus clementina HOM05D000022 ORTHO05D000071 9.0e-06 54.3 55 40.0
Gohir.D11G084400 Gossypium hirsutum HOM05D000655 ORTHO05D001166 9.0e-06 54.3 102 31.4
Gorai.007G090000 Gossypium raimondii HOM05D000655 ORTHO05D001166 9.0e-06 54.3 102 31.4
Potri.011G027600 Populus trichocarpa HOM05D000022 ORTHO05D000071 9.0e-06 54.3 55 38.2
SalBow6G5378 Salvia bowleyana HOM05D006839 ORTHO05D007872 9.0e-06 54.3 133 24.1


User provided reference genes

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