Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGR083G0610 Punica granatum HOM05D006927 ORTHO05D009065 1.3e-177 626.3 316 100.0
GSVIVG01019324001 Vitis vinifera HOM05D006927 ORTHO05D009065 1.0e-134 483.8 288 78.8
Eucgr.D01080 Eucalyptus grandis HOM05D006927 ORTHO05D009065 8.5e-134 480.7 286 78.3
RcHm_v2.0_Chr1g0340711 Rosa chinensis HOM05D006927 ORTHO05D009065 1.1e-128 463.8 288 75.0
Potri.013G070700 Populus trichocarpa HOM05D006927 ORTHO05D009065 4.1e-128 461.8 288 75.7
FAN10G1940 Fragaria x ananassa HOM05D006927 ORTHO05D009065 5.4e-128 461.5 289 74.0
FAN03G0521 Fragaria x ananassa HOM05D006927 ORTHO05D009065 1.6e-127 459.9 288 74.3
MD07G1081500 Malus domestica HOM05D006927 ORTHO05D009065 1.6e-127 459.9 277 76.9
QL04p053394 Quercus lobata HOM05D006927 ORTHO05D009065 3.5e-127 458.8 286 75.2
Gohir.A11G224222 Gossypium hirsutum HOM05D006927 ORTHO05D009065 4.5e-127 458.4 288 75.3
FvH4_7g08340 Fragaria vesca HOM05D006927 ORTHO05D009065 2.3e-126 456.1 288 73.6
Gorai.007G250200 Gossypium raimondii HOM05D006927 ORTHO05D009065 2.3e-126 456.1 288 74.7
Dinv43961 Davidia involucrata HOM05D006927 ORTHO05D009065 3.8e-126 455.3 276 77.5
Ciclev10032190m.g Citrus clementina HOM05D006927 ORTHO05D009065 5.0e-126 454.9 318 69.5
Cpa.g.sc73.27 Carica papaya HOM05D006927 ORTHO05D009065 6.6e-126 454.5 287 74.2
Duzib177G0162 Durio zibethinus HOM05D006927 ORTHO05D009065 8.6e-126 454.1 288 75.7
Prupe.2G106800 Prunus persica HOM05D006927 ORTHO05D009065 1.1e-125 453.8 286 73.4
CSS0044270 Camellia sinensis var. sinensis HOM05D006927 ORTHO05D009065 2.5e-125 452.6 288 74.0
Thecc.05G234500 Theobroma cacao HOM05D006927 ORTHO05D009065 4.2e-125 451.8 288 75.3
Manes.09G133500 Manihot esculenta HOM05D006927 ORTHO05D009065 7.2e-125 451.1 288 74.0
CSS0031880 Camellia sinensis var. sinensis HOM05D006927 ORTHO05D009065 2.1e-124 449.5 288 73.6
TAR629G3441 Trochodendron aralioides HOM05D006927 ORTHO05D009065 2.1e-124 449.5 275 76.0
Rhsim07G0047700 Rhododendron simsii HOM05D006927 ORTHO05D009065 2.8e-124 449.1 309 72.2
Lj9A617T58 Lonicera japonica HOM05D006927 ORTHO05D009065 1.4e-123 446.8 275 76.7
MELO3C022480.2 Cucumis melo HOM05D006927 ORTHO05D009065 3.0e-123 445.7 288 71.9
CsaV3_6G006390 Cucumis sativus L. HOM05D006927 ORTHO05D009065 3.0e-123 445.7 288 71.9
FAN06G3009 Fragaria x ananassa HOM05D006927 ORTHO05D009065 1.5e-122 443.4 306 69.0
Lsat_1_v5_gn_1_89341 Lactuca sativa HOM05D006927 ORTHO05D009065 4.4e-122 441.8 288 74.0
Lj1g0006598 Lotus japonicus HOM05D006927 ORTHO05D009065 9.8e-122 440.7 286 73.1
TWI34G1327 Tripterygium wilfordii HOM05D006927 ORTHO05D009065 1.7e-121 439.9 286 72.0
Migut.B01420 Erythranthe guttata HOM05D006927 ORTHO05D009065 1.4e-120 436.8 288 72.9
DCAR_001906 Daucus carota HOM05D006927 ORTHO05D009065 1.2e-119 433.7 287 72.1
Aqoxy1G00986 Aquilegia oxysepala HOM05D006927 ORTHO05D009065 1.6e-119 433.3 305 68.5
Cc02_g26470 Coffea canephora HOM05D006927 ORTHO05D009065 4.5e-119 431.8 286 72.7
Haze_15787 Corylus avellana HOM05D006927 ORTHO05D009065 4.5e-119 431.8 288 71.9
VMungo0251G3349 Vigna mungo HOM05D006927 ORTHO05D009065 7.8e-119 431.0 289 71.3
Solyc01g081480.3 Solanum lycopersicum HOM05D006927 ORTHO05D009065 1.7e-118 429.9 289 71.6
Sopen01g033040 Solanum pennellii HOM05D006927 ORTHO05D009065 3.9e-118 428.7 289 71.6
MBI04_g06278_MAGBIO Magnolia biondii HOM05D006927 ORTHO05D009065 8.6e-118 427.6 275 70.2
Nitab4.5_0006785g0060 Nicotiana tabacum HOM05D006927 ORTHO05D009065 8.6e-118 427.6 288 72.9
Medtr3g118320 Medicago truncatula HOM05D006927 ORTHO05D009065 1.5e-117 426.8 289 69.6
PGSC0003DMG400031110 Solanum tuberosum HOM05D006927 ORTHO05D009065 1.9e-117 426.4 289 70.9
Peaxi162Scf00907g00025 Petunia axillaris HOM05D006927 ORTHO05D009065 2.5e-117 426.0 288 70.8
Sed0018978 Sechium edule HOM05D006927 ORTHO05D009065 5.6e-117 424.9 289 67.5
Atru.chr2.1634 Acer truncatum HOM05D006927 ORTHO05D009065 7.3e-117 424.5 314 65.9
AL6G28760 Arabidopsis lyrata HOM05D006927 ORTHO05D009065 1.2e-116 423.7 290 70.3
HanXRQChr01g0018481 Helianthus annuus HOM05D006927 ORTHO05D009065 1.2e-116 423.7 290 70.0
Zm00001eb208940 Zea mays HOM05D006927 ORTHO05D009065 1.2e-116 423.7 292 70.9
CAN.G992.25 Capsicum annuum HOM05D006927 ORTHO05D009065 1.6e-116 423.3 288 71.2
ECA248G1152 Erigeron canadensis HOM05D006927 ORTHO05D009065 3.6e-116 422.2 282 69.9
Os02g0129900 Oryza sativa ssp. japonica HOM05D006927 ORTHO05D009065 4.7e-116 421.8 289 70.2
THA.LOC104820815 Tarenaya hassleriana HOM05D006927 ORTHO05D009065 4.7e-116 421.8 290 68.6
Nitab4.5_0000792g0130 Nicotiana tabacum HOM05D006927 ORTHO05D009065 6.1e-116 421.4 288 71.5
SalBow5G1207 Salvia bowleyana HOM05D006927 ORTHO05D009065 6.1e-116 421.4 288 70.5
AT5G17670 Arabidopsis thaliana HOM05D006927 ORTHO05D009065 8.0e-116 421.0 290 70.3
BcaC03g13532 Brassica carinata HOM05D006927 ORTHO05D009065 1.0e-115 420.6 288 69.4
Glyma.06G001500 Glycine max HOM05D006927 ORTHO05D009065 2.3e-115 419.5 292 70.9
A02p04400 Brassica napus HOM05D006927 ORTHO05D009065 2.6e-114 416.0 294 68.4
Thhalv10014137m.g Eutrema salsugineum HOM05D006927 ORTHO05D009065 2.6e-114 416.0 292 68.5
Sp6g26550 Schrenkiella parvula HOM05D006927 ORTHO05D009065 3.7e-113 412.1 292 67.5
C02p09230 Brassica napus HOM05D006927 ORTHO05D009065 4.9e-113 411.8 292 67.8
Carub.0006s1591 Capsella rubella HOM05D006927 ORTHO05D009065 4.9e-113 411.8 292 68.2
COL.COLO4_21417 Corchorus olitorius HOM05D006927 ORTHO05D009065 8.3e-113 411.0 287 72.1
vmacro13598 Vaccinium macrocarpon HOM05D006927 ORTHO05D009065 3.2e-112 409.1 391 55.2
TPR.G38566 Trifolium pratense HOM05D006927 ORTHO05D009065 9.2e-112 407.5 293 67.9
ClCG06G000620 Citrullus lanatus HOM05D006927 ORTHO05D009065 1.6e-111 406.8 334 59.0
Phvul.002G317100 Phaseolus vulgaris HOM05D006927 ORTHO05D009065 2.7e-111 406.0 289 67.8
arahy.Tifrunner.gnm1.ann1.DTN3WJ Arachis hypogaea HOM05D006927 ORTHO05D009065 3.5e-111 405.6 291 68.7
Ah.16g104050 Amaranthus hybridus HOM05D006927 ORTHO05D009065 6.0e-111 404.8 288 68.1
Ca_15418_v3 Cicer arietinum L. HOM05D006927 ORTHO05D009065 6.0e-111 404.8 266 71.4
Sc11g0005590 Simmondsia chinensis HOM05D006927 ORTHO05D009065 6.0e-111 404.8 291 66.3
arahy.Tifrunner.gnm1.ann1.A7PVHI Arachis hypogaea HOM05D006927 ORTHO05D009065 1.7e-110 403.3 291 68.7
ATR0568G108 Amborella trichopoda HOM05D006927 ORTHO05D009065 3.0e-110 402.5 287 67.9
CANSAT25G2771 Cannabis sativa HOM05D006927 ORTHO05D009065 1.1e-107 394.0 287 66.6
SGA_v2.0_scaffold98G29375 Striga asiatica HOM05D006927 ORTHO05D009065 1.5e-106 390.2 272 70.2
PSO675G5316 Papaver somniferum HOM05D006927 ORTHO05D009065 3.4e-106 389.0 302 62.3
Aa31LG11G11960 Aethionema arabicum HOM05D006927 ORTHO05D009065 8.3e-105 384.4 323 60.1
FAN01G0804 Fragaria x ananassa HOM05D006927 ORTHO05D009065 3.2e-104 382.5 275 67.6
Sabra13G0061600 Salix brachista HOM05D006927 ORTHO05D009065 4.0e-99 365.5 349 55.3
Lalb_Chr08g0246751 Lupinus albus HOM05D006927 ORTHO05D009065 1.7e-97 360.1 291 60.1
MD02G1231900 Malus domestica HOM05D006927 ORTHO05D009065 6.4e-97 358.2 249 68.7
CDE02G0279 Ceratophyllum demersum HOM05D006927 ORTHO05D009065 2.1e-95 353.2 288 59.4
AagrBONN_evm.TU.Sc2ySwM_228.4179 Anthoceros agrestis HOM05D006927 ORTHO05D009065 2.8e-92 342.8 302 56.0
Pp3c20_10810 Physcomitrium patens HOM05D006927 ORTHO05D009065 3.6e-92 342.4 295 57.3
Mapoly0110s0034 Marchantia polymorpha HOM05D006927 ORTHO05D009065 2.1e-87 326.6 295 55.3
SMO141G0137 Selaginella moellendorffii HOM05D006927 ORTHO05D009065 2.4e-83 313.2 273 55.7
Psat5g000960 Pisum sativum HOM05D006927 ORTHO05D009065 3.4e-82 309.3 228 66.7
Actinidia31733 Actinidia chinensis HOM05D006927 ORTHO05D009065 9.0e-75 284.6 180 74.4
Dinv43521 Davidia involucrata HOM05D006927 ORTHO05D009065 4.9e-73 278.9 172 76.7
Nn1g09344 Nelumbo nucifera HOM05D006927 ORTHO05D009065 3.2e-72 276.2 171 74.9
Oeu034881.1 Olea europaea HOM05D006927 ORTHO05D009065 1.2e-71 274.2 170 76.5
CiPaw.02G047300 Carya illinoinensis HOM05D006927 ORTHO05D009065 1.0e-70 271.2 168 75.0
BolC2t06832H Brassica oleracea HOM05D006927 ORTHO05D009065 5.1e-70 268.9 169 76.3
BraA02t05404Z Brassica rapa HOM05D006927 ORTHO05D009065 1.1e-69 267.7 169 75.7
MCO09G674 Micromonas commoda HOM05D006927 ORTHO05D009065 2.6e-66 256.5 273 46.9
Aqoxy116s007 Aquilegia oxysepala HOM05D006927 ORTHO05D009065 5.8e-66 255.4 281 50.5
HPP92_025548 Vanilla planifolia HOM05D006927 ORTHO05D009065 2.1e-63 246.9 181 63.5
Cre07.g313550 Chlamydomonas reinhardtii HOM05D006927 ORTHO05D009065 1.9e-61 240.4 280 43.6
PRCOL_00002784 Prasinoderma coloniale HOM05D006927 ORTHO05D009065 4.8e-60 235.7 285 44.9
CARHR195510 Cardamine hirsuta HOM05D006927 ORTHO05D009065 1.4e-56 224.2 163 66.3
Gohir.D11G237100 Gossypium hirsutum HOM05D006927 ORTHO05D009065 1.4e-48 197.6 124 77.4
unitig_26.g8847 Utricularia gibba HOM05D006927 ORTHO05D009065 6.7e-46 188.7 126 73.0
unitig_26.g8846 Utricularia gibba HOM05D006927 ORTHO05D009065 1.2e-31 141.4 73 83.6
PRCOL_00000683 Prasinoderma coloniale HOM05D006927 ORTHO05D009065 3.6e-31 139.8 282 35.5
Actinidia34774 Actinidia chinensis HOM05D006927 ORTHO05D009065 1.8e-27 127.5 82 70.7
MCO02G275 Micromonas commoda HOM05D006927 ORTHO05D044296 5.9e-26 122.5 319 31.0
Thecc.05G234900 Theobroma cacao HOM05D006927 ORTHO05D009065 5.9e-26 122.5 60 86.7
SEGI_38351 Sequoiadendron giganteum HOM05D006927 ORTHO05D009065 1.5e-24 117.9 99 56.6
Cre01.g025150 Chlamydomonas reinhardtii HOM05D006927 ORTHO05D044296 1.0e-22 111.7 343 28.3
BcaB08g36753 Brassica carinata HOM05D006927 ORTHO05D009065 3.4e-21 106.7 107 53.3
HPP92_025520 Vanilla planifolia HOM05D006927 ORTHO05D009065 1.6e-18 97.8 157 41.4
AagrBONN_evm.TU.Sc2ySwM_368.1936 Anthoceros agrestis HOM05D006927 ORTHO05D071668 1.3e-12 78.2 235 26.8
CBR_g4745 Chara braunii HOM05D000019 ORTHO05D000002 1.0e-09 68.6 65 46.2
PRCOL_00002844 Prasinoderma coloniale HOM05D006927 ORTHO05D049054 1.1e-08 65.1 140 35.7
MCO12G090 Micromonas commoda HOM05D006927 ORTHO05D049054 1.4e-06 58.2 251 24.7
C09p59490 Brassica napus HOM05D000005 ORTHO05D040849 4.0e-06 56.6 157 29.3


User provided reference genes

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