Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGR083G0575 Punica granatum HOM05D008362 ORTHO05D010554 3.3e-82 308.5 179 100.0
Sopen06g034630 Solanum pennellii HOM05D008362 ORTHO05D010554 1.7e-09 67.0 103 44.7
QL09p049939 Quercus lobata HOM05D008362 ORTHO05D010554 3.7e-09 65.9 98 51.0
Medtr8g012580 Medicago truncatula HOM05D008362 ORTHO05D010554 8.3e-09 64.7 90 47.8
GSVIVG01006384001 Vitis vinifera HOM05D008362 ORTHO05D010554 1.4e-08 63.9 93 49.5
PGSC0003DMG400020171 Solanum tuberosum HOM05D008362 ORTHO05D010554 1.8e-08 63.5 103 43.7
Gohir.A07G092300 Gossypium hirsutum HOM05D008362 ORTHO05D010554 5.4e-08 62.0 84 46.4
Lalb_Chr07g0194111 Lupinus albus HOM05D008362 ORTHO05D010554 9.1e-08 61.2 52 69.2
MD05G1169400 Malus domestica HOM05D008362 ORTHO05D010554 9.1e-08 61.2 97 46.4
CiPaw.13G050500 Carya illinoinensis HOM05D008362 ORTHO05D010554 1.2e-07 60.8 61 60.7
TPR.G28197 Trifolium pratense HOM05D008362 ORTHO05D010554 2.0e-07 60.1 51 68.6
Lj3g0027645 Lotus japonicus HOM05D008362 ORTHO05D010554 5.9e-07 58.5 51 68.6
FAN27G1021 Fragaria x ananassa HOM05D008362 ORTHO05D010554 7.7e-07 58.2 55 58.2
Hma1.2p1_0226F.1_g095250 Hydrangea macrophylla HOM05D008362 ORTHO05D010554 7.7e-07 58.2 37 75.7
COL.COLO4_16103 Corchorus olitorius HOM05D008362 ORTHO05D010554 1.3e-06 57.4 54 64.8
VMungo0331G0307 Vigna mungo HOM05D008362 ORTHO05D010554 1.7e-06 57.0 63 54.0
arahy.Tifrunner.gnm1.ann1.L802W9 Arachis hypogaea HOM05D008362 ORTHO05D010554 2.3e-06 56.6 110 43.6
FAN24G1934 Fragaria x ananassa HOM05D008362 ORTHO05D010554 2.3e-06 56.6 77 50.6
Cfa021480 Carpinus fangiana HOM05D008362 ORTHO05D010554 3.8e-06 55.8 31 87.1
Haze_03348 Corylus avellana HOM05D008362 ORTHO05D010554 3.8e-06 55.8 31 87.1
Ca_23217_v3 Cicer arietinum L. HOM05D008362 ORTHO05D010554 5.0e-06 55.5 52 65.4
CSS0045887 Camellia sinensis var. sinensis HOM05D008362 ORTHO05D010554 6.6e-06 55.1 61 55.7
Psat4g204280 Pisum sativum HOM05D008362 ORTHO05D010554 6.6e-06 55.1 73 47.9
ATR0561G249 Amborella trichopoda HOM05D008362 ORTHO05D010554 8.6e-06 54.7 72 45.8
FAN15G1847 Fragaria x ananassa HOM05D008362 ORTHO05D010554 8.6e-06 54.7 85 44.7
HanXRQChr06g0172231 Helianthus annuus HOM05D008362 ORTHO05D010554 8.6e-06 54.7 54 59.3


User provided reference genes

Program Settings