Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGR083G0463 Punica granatum HOM05D006548 ORTHO05D008064 1.8e-84 315.8 160 100.0
Manes.13G055300 Manihot esculenta HOM05D006548 ORTHO05D008064 1.2e-67 260.0 165 80.0
COL.COLO4_06931 Corchorus olitorius HOM05D006548 ORTHO05D008064 3.5e-67 258.5 162 80.9
Manes.12G059600 Manihot esculenta HOM05D006548 ORTHO05D008064 5.0e-66 254.6 160 77.5
Nn3g18599 Nelumbo nucifera HOM05D006548 ORTHO05D008064 6.6e-66 254.2 165 78.8
TAR362G1118 Trochodendron aralioides HOM05D006548 ORTHO05D008064 1.2e-64 250.0 165 77.0
PSO017G5831 Papaver somniferum HOM05D006548 ORTHO05D008064 6.2e-64 247.7 160 78.8
Prupe.8G188900 Prunus persica HOM05D006548 ORTHO05D008064 1.1e-63 246.9 164 78.0
Gorai.007G160300 Gossypium raimondii HOM05D006548 ORTHO05D008064 1.4e-63 246.5 162 79.6
Gohir.A11G143200 Gossypium hirsutum HOM05D006548 ORTHO05D008064 1.8e-63 246.1 162 79.6
Gohir.D07G202600 Gossypium hirsutum HOM05D006548 ORTHO05D008064 3.1e-63 245.4 162 78.4
Ciclev10017030m.g Citrus clementina HOM05D006548 ORTHO05D008064 4.0e-63 245.0 160 79.4
Gohir.D11G149500 Gossypium hirsutum HOM05D006548 ORTHO05D008064 6.8e-63 244.2 162 79.0
Potri.002G239000 Populus trichocarpa HOM05D006548 ORTHO05D008064 6.8e-63 244.2 160 78.8
Rhsim13G0053600 Rhododendron simsii HOM05D006548 ORTHO05D008064 6.8e-63 244.2 163 74.2
Gorai.001G228000 Gossypium raimondii HOM05D006548 ORTHO05D008064 8.9e-63 243.8 162 77.8
Sabra02G0182000 Salix brachista HOM05D006548 ORTHO05D008064 8.9e-63 243.8 160 79.4
CSS0021481 Camellia sinensis var. sinensis HOM05D006548 ORTHO05D008064 1.2e-62 243.4 166 78.3
Cpa.g.sc8.57 Carica papaya HOM05D004405 ORTHO05D005613 1.2e-62 243.4 163 76.7
CiPaw.13G058400 Carya illinoinensis HOM05D006548 ORTHO05D008064 2.0e-62 242.7 155 78.7
Lj2P1115T39 Lonicera japonica HOM05D006548 ORTHO05D008064 2.0e-62 242.7 165 77.0
Atru.chr6.3534 Acer truncatum HOM05D006548 ORTHO05D008064 3.4e-62 241.9 166 74.7
Potri.014G177100 Populus trichocarpa HOM05D006548 ORTHO05D008064 4.4e-62 241.5 160 79.4
Sabra14G0135300 Salix brachista HOM05D006548 ORTHO05D008064 4.4e-62 241.5 159 78.6
Nn4g25121 Nelumbo nucifera HOM05D006548 ORTHO05D008064 9.8e-62 240.4 165 73.9
THA.LOC104819003 Tarenaya hassleriana HOM05D006548 ORTHO05D008064 1.7e-61 239.6 163 74.2
PSO675G8742 Papaver somniferum HOM05D006548 ORTHO05D008064 2.2e-61 239.2 160 76.9
Cfa010631 Carpinus fangiana HOM05D006548 ORTHO05D008064 4.9e-61 238.0 160 76.9
Duzib138G0849 Durio zibethinus HOM05D006548 ORTHO05D008064 4.9e-61 238.0 162 75.3
RcHm_v2.0_Chr6g0282621 Rosa chinensis HOM05D006548 ORTHO05D008064 4.9e-61 238.0 154 74.0
Sp3g06390 Schrenkiella parvula HOM05D006548 ORTHO05D008064 6.4e-61 237.7 163 74.2
AL3G18800 Arabidopsis lyrata HOM05D006548 ORTHO05D008064 8.3e-61 237.3 159 74.8
AT3G07480 Arabidopsis thaliana HOM05D006548 ORTHO05D008064 8.3e-61 237.3 159 74.8
Carub.0003s0703 Capsella rubella HOM05D006548 ORTHO05D008064 1.1e-60 236.9 159 76.1
FAN27G0042 Fragaria x ananassa HOM05D006548 ORTHO05D008064 1.1e-60 236.9 154 74.7
FAN27G0390 Fragaria x ananassa HOM05D006548 ORTHO05D008064 1.1e-60 236.9 154 74.7
vmacro02826 Vaccinium macrocarpon HOM05D006548 ORTHO05D008064 1.1e-60 236.9 166 72.9
Nitab4.5_0002311g0090 Nicotiana tabacum HOM05D006548 ORTHO05D008064 1.9e-60 236.1 161 74.5
MD10G1150500 Malus domestica HOM05D006548 ORTHO05D008064 2.4e-60 235.7 162 75.3
Nitab4.5_0011925g0010 Nicotiana tabacum HOM05D006548 ORTHO05D008064 2.4e-60 235.7 165 74.5
FvH4_2g17650 Fragaria vesca HOM05D006548 ORTHO05D008064 3.2e-60 235.3 154 74.0
CSS0032607 Camellia sinensis var. sinensis HOM05D006548 ORTHO05D008064 4.1e-60 235.0 166 74.1
Oeu051515.1 Olea europaea HOM05D006548 ORTHO05D008064 7.0e-60 234.2 160 74.4
Haze_03573 Corylus avellana HOM05D006548 ORTHO05D008064 9.2e-60 233.8 162 75.9
Peaxi162Scf00372g00041 Petunia axillaris HOM05D006548 ORTHO05D008064 1.2e-59 233.4 161 75.2
Cc01_g16030 Coffea canephora HOM05D006548 ORTHO05D008064 1.6e-59 233.0 165 73.9
Sed0004612 Sechium edule HOM05D006548 ORTHO05D008064 1.6e-59 233.0 162 74.7
CARHR082130 Cardamine hirsuta HOM05D006548 ORTHO05D008064 2.1e-59 232.6 162 71.6
Hma1.2p1_0161F.1_g071510 Hydrangea macrophylla HOM05D006548 ORTHO05D008064 2.1e-59 232.6 164 72.6
ClCG09G007890 Citrullus lanatus HOM05D006548 ORTHO05D008064 4.6e-59 231.5 166 74.7
FAN24G3284 Fragaria x ananassa HOM05D006548 ORTHO05D008064 4.6e-59 231.5 152 73.7
Nitab4.5_0001348g0010 Nicotiana tabacum HOM05D006548 ORTHO05D008064 7.8e-59 230.7 165 72.7
Nitab4.5_0007144g0040 Nicotiana tabacum HOM05D006548 ORTHO05D008064 7.8e-59 230.7 165 72.7
MBI08_g14954_MAGBIO Magnolia biondii HOM05D006659 ORTHO05D008064 1.3e-58 229.9 160 73.8
VMungo1383G2587 Vigna mungo HOM05D006548 ORTHO05D008064 1.3e-58 229.9 157 72.0
Ah.11g050830 Amaranthus hybridus HOM05D006548 ORTHO05D008064 1.7e-58 229.6 163 71.8
MSTRG.17967 Avicennia marina HOM05D006548 ORTHO05D008064 1.7e-58 229.6 165 73.3
BcaC05g29539 Brassica carinata HOM05D006548 ORTHO05D008064 2.3e-58 229.2 160 71.9
Sopen06g034400 Solanum pennellii HOM05D006548 ORTHO05D008064 5.1e-58 228.0 160 72.5
HanXRQChr08g0231851 Helianthus annuus HOM05D006548 ORTHO05D008064 6.6e-58 227.6 160 71.2
arahy.Tifrunner.gnm1.ann1.C7NXRU Arachis hypogaea HOM05D006548 ORTHO05D008064 8.6e-58 227.3 163 71.2
Thhalv10021677m.g Eutrema salsugineum HOM05D006548 ORTHO05D008064 8.6e-58 227.3 159 71.1
AUR62028648 Chenopodium quinoa HOM05D006548 ORTHO05D008064 1.1e-57 226.9 169 69.2
Duzib211G0675 Durio zibethinus HOM05D006548 ORTHO05D008064 1.5e-57 226.5 162 72.2
PGSC0003DMG400027686 Solanum tuberosum HOM05D006548 ORTHO05D008064 1.5e-57 226.5 160 71.9
arahy.Tifrunner.gnm1.ann1.I0E60T Arachis hypogaea HOM05D006548 ORTHO05D008064 1.9e-57 226.1 163 70.6
Glyma.08G343100 Glycine max HOM05D006548 ORTHO05D008064 1.9e-57 226.1 157 70.7
CANSAT01G2941 Cannabis sativa HOM05D006548 ORTHO05D008064 2.5e-57 225.7 169 68.0
CAN.G874.34 Capsicum annuum HOM05D006548 ORTHO05D008064 3.3e-57 225.3 162 71.6
Phvul.008G137800 Phaseolus vulgaris HOM05D006548 ORTHO05D008064 3.3e-57 225.3 162 68.5
BolC5t34638H Brassica oleracea HOM05D006548 ORTHO05D008064 1.2e-56 223.4 159 71.7
A05p40730 Brassica napus HOM05D006548 ORTHO05D008064 2.8e-56 222.2 157 73.9
BraA05t22804Z Brassica rapa HOM05D006548 ORTHO05D008064 2.8e-56 222.2 157 73.9
HPP92_002744 Vanilla planifolia HOM05D006548 ORTHO05D008064 3.6e-56 221.9 160 68.8
Aa31LG5G18040 Aethionema arabicum HOM05D006548 ORTHO05D008064 6.2e-56 221.1 161 68.9
BcaB03g14699 Brassica carinata HOM05D006548 ORTHO05D008064 8.1e-56 220.7 159 69.8
C05p59840 Brassica napus HOM05D006548 ORTHO05D008064 8.1e-56 220.7 159 71.1
DCAR_030798 Daucus carota HOM05D006548 ORTHO05D008064 8.1e-56 220.7 160 70.0
Lalb_Chr03g0040981 Lupinus albus HOM05D006548 ORTHO05D008064 8.1e-56 220.7 157 72.0
Lalb_Chr01g0021941 Lupinus albus HOM05D006548 ORTHO05D008064 1.1e-55 220.3 160 69.4
Migut.N00670 Erythranthe guttata HOM05D006548 ORTHO05D008064 1.4e-55 219.9 165 67.9
SGA_v2.0_scaffold95G28706 Striga asiatica HOM05D006548 ORTHO05D008064 1.4e-55 219.9 162 68.5
MELO3C015717.2 Cucumis melo HOM05D006548 ORTHO05D008064 2.3e-55 219.2 166 68.7
QL09p047049 Quercus lobata HOM05D006548 ORTHO05D008064 2.3e-55 219.2 159 70.4
Glyma.18G153900 Glycine max HOM05D006548 ORTHO05D008064 3.1e-55 218.8 157 69.4
Aqoxy2G04054 Aquilegia oxysepala HOM05D006548 ORTHO05D008064 5.2e-55 218.0 160 69.4
Thecc.01G209700 Theobroma cacao HOM05D006548 ORTHO05D008064 6.8e-55 217.6 146 78.1
Psat3g151760 Pisum sativum HOM05D006548 ORTHO05D008064 2.6e-54 215.7 157 70.1
TWI75G1339 Tripterygium wilfordii HOM05D006548 ORTHO05D008064 5.8e-54 214.5 154 69.5
Lj1g0008534 Lotus japonicus HOM05D006548 ORTHO05D008064 1.7e-53 213.0 160 66.2
ATR0824G029 Amborella trichopoda HOM05D006548 ORTHO05D008064 3.7e-53 211.8 138 73.9
TPR.G26806 Trifolium pratense HOM05D006548 ORTHO05D008064 3.2e-52 208.8 158 68.4
PGSC0003DMG400020639 Solanum tuberosum HOM05D006548 ORTHO05D008064 7.1e-52 207.6 162 67.9
ECA247G0922 Erigeron canadensis HOM05D006548 ORTHO05D008064 1.6e-51 206.5 161 67.1
TWI18G0731 Tripterygium wilfordii HOM05D006548 ORTHO05D008064 1.6e-51 206.5 154 68.8
TWI36G0698 Tripterygium wilfordii HOM05D006548 ORTHO05D008064 1.6e-51 206.5 154 68.8
Solyc06g007630.1 Solanum lycopersicum HOM05D006548 ORTHO05D008064 2.1e-51 206.1 162 66.7
Sopen06g002520 Solanum pennellii HOM05D006548 ORTHO05D008064 2.1e-51 206.1 162 66.7
Ca_07442_v3 Cicer arietinum L. HOM05D006548 ORTHO05D008064 4.6e-51 204.9 158 65.8
Os09g0514600 Oryza sativa ssp. japonica HOM05D006548 ORTHO05D008064 6.0e-51 204.5 162 65.4
unitig_61.g26345 Utricularia gibba HOM05D006548 ORTHO05D008064 6.6e-50 201.1 160 63.1
Medtr7g051230 Medicago truncatula HOM05D006548 ORTHO05D008064 1.5e-49 199.9 157 65.0
GSVIVG01003797001 Vitis vinifera HOM05D006548 ORTHO05D008064 1.5e-49 199.9 138 70.3
Zm00001eb102720 Zea mays HOM05D006548 ORTHO05D008064 1.9e-49 199.5 160 61.2
Lsat_1_v5_gn_9_16480 Lactuca sativa HOM05D006548 ORTHO05D008064 2.5e-49 199.1 170 66.5
CsaV3_7G027180 Cucumis sativus L. HOM05D006548 ORTHO05D008064 2.1e-48 196.1 150 68.7
Zm00001eb318350 Zea mays HOM05D006548 ORTHO05D008064 4.0e-47 191.8 119 74.8
Sc05g0001680 Simmondsia chinensis HOM05D006548 ORTHO05D008064 2.0e-46 189.5 144 68.1
EL10Ac5g10597 Beta vulgaris HOM05D006548 ORTHO05D008064 2.7e-43 179.1 151 61.6
Gohir.A07G196200 Gossypium hirsutum HOM05D006548 ORTHO05D008064 8.1e-40 167.5 152 59.2
Pp3c2_31000 Physcomitrium patens HOM05D006548 ORTHO05D008064 5.1e-34 148.3 120 56.7
AagrBONN_evm.TU.Sc2ySwM_362.984 Anthoceros agrestis HOM05D006548 ORTHO05D008064 1.5e-33 146.7 158 48.7
Ciclev10013747m.g Citrus clementina HOM05D006548 ORTHO05D008064 5.3e-31 138.3 82 81.7
CDE12G0850 Ceratophyllum demersum HOM05D006548 ORTHO05D008064 7.6e-30 134.4 77 75.3
BcaC05g29538 Brassica carinata HOM05D006548 ORTHO05D008064 5.4e-28 128.3 107 62.6
Mapoly0085s0036 Marchantia polymorpha HOM05D006548 ORTHO05D008064 1.4e-23 113.6 150 40.7
C03p67920 Brassica napus HOM05D006548 ORTHO05D008064 1.8e-23 113.2 90 62.2
BcaC01g02172 Brassica carinata HOM05D006548 ORTHO05D008064 9.0e-23 110.9 90 61.1
Actinidia30005 Actinidia chinensis HOM05D006548 ORTHO05D008064 4.6e-19 98.6 171 45.6
SEGI_16405 Sequoiadendron giganteum HOM05D002489 ORTHO05D002653 1.1e-17 94.0 79 59.5
CBR_g34314 Chara braunii HOM05D006548 ORTHO05D008064 1.1e-15 87.4 125 37.6
BolC3t19017H Brassica oleracea HOM05D006548 ORTHO05D008064 4.5e-14 82.0 49 75.5
BraA03t13759Z Brassica rapa HOM05D006548 ORTHO05D008064 1.0e-13 80.9 49 77.6
SMO119G0279 Selaginella moellendorffii HOM05D006548 ORTHO05D008064 4.9e-13 78.6 124 34.7
Mapoly0113s0043 Marchantia polymorpha HOM05D006548 ORTHO05D008064 2.8e-08 62.8 131 31.3


User provided reference genes

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