Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGR083G0376 Punica granatum HOM05D006845 ORTHO05D009300 6.5e-254 880.2 423 100.0
Eucgr.F01150 Eucalyptus grandis HOM05D006845 ORTHO05D009300 3.6e-220 768.1 424 85.1
Thecc.07G091800 Theobroma cacao HOM05D006845 ORTHO05D009300 1.1e-216 756.5 423 82.7
Gohir.D08G031900 Gossypium hirsutum HOM05D006845 ORTHO05D009300 7.0e-216 753.8 423 82.5
Gohir.A08G021200 Gossypium hirsutum HOM05D006845 ORTHO05D009300 3.5e-215 751.5 423 82.3
Prupe.4G179900 Prunus persica HOM05D006845 ORTHO05D009300 8.6e-214 746.9 423 81.3
Gorai.004G029400 Gossypium raimondii HOM05D006845 ORTHO05D009300 1.9e-213 745.7 423 81.8
Manes.15G087900 Manihot esculenta HOM05D006845 ORTHO05D009300 6.1e-212 740.7 423 81.8
CiPaw.11G170600 Carya illinoinensis HOM05D006845 ORTHO05D009300 3.0e-211 738.4 405 84.0
RcHm_v2.0_Chr5g0033181 Rosa chinensis HOM05D006845 ORTHO05D009300 1.2e-210 736.5 423 79.7
CANSAT56G3540 Cannabis sativa HOM05D006845 ORTHO05D009300 7.5e-210 733.8 426 79.3
Potri.011G118000 Populus trichocarpa HOM05D006845 ORTHO05D009300 9.8e-210 733.4 421 80.3
FvH4_3g19780 Fragaria vesca HOM05D006845 ORTHO05D009300 3.7e-209 731.5 418 80.1
QL08p022228 Quercus lobata HOM05D006845 ORTHO05D009300 8.3e-209 730.3 422 78.9
GSVIVG01014313001 Vitis vinifera HOM05D006845 ORTHO05D009300 2.4e-208 728.8 424 79.7
Ciclev10008389m.g Citrus clementina HOM05D006845 ORTHO05D009300 1.2e-207 726.5 427 78.9
CSS0022560 Camellia sinensis var. sinensis HOM05D006845 ORTHO05D009300 2.7e-207 725.3 425 78.6
Nn1g06500 Nelumbo nucifera HOM05D006845 ORTHO05D009300 1.3e-206 723.0 423 78.3
Potri.001G398900 Populus trichocarpa HOM05D006845 ORTHO05D009300 1.3e-206 723.0 411 81.5
Dinv14926 Davidia involucrata HOM05D006845 ORTHO05D009300 2.3e-206 722.2 425 79.1
MD11G1250000 Malus domestica HOM05D006845 ORTHO05D009300 3.8e-206 721.5 420 78.1
Solyc12g013890.2 Solanum lycopersicum HOM05D006845 ORTHO05D009300 5.0e-206 721.1 425 78.4
Sopen12g007210 Solanum pennellii HOM05D006845 ORTHO05D009300 6.6e-206 720.7 425 78.1
TAR627G0110 Trochodendron aralioides HOM05D006845 ORTHO05D009300 8.6e-206 720.3 424 77.1
COL.COLO4_27185 Corchorus olitorius HOM05D006845 ORTHO05D009300 3.3e-205 718.4 423 77.8
ClCG11G018010 Citrullus lanatus HOM05D006845 ORTHO05D009300 9.5e-205 716.8 413 80.1
Hma1.2p1_0898F.1_g234490 Hydrangea macrophylla HOM05D006845 ORTHO05D009300 9.5e-205 716.8 413 79.7
AL8G28920 Arabidopsis lyrata HOM05D006845 ORTHO05D009300 1.6e-204 716.1 423 78.7
AT5G53860 Arabidopsis thaliana HOM05D006845 ORTHO05D009300 1.0e-203 713.4 423 78.5
Cfa020572 Carpinus fangiana HOM05D006845 ORTHO05D009300 5.2e-203 711.1 417 79.9
Sp6g15920 Schrenkiella parvula HOM05D006845 ORTHO05D009300 5.2e-203 711.1 423 78.0
Atru.chr2.2481 Acer truncatum HOM05D006845 ORTHO05D009300 6.8e-203 710.7 405 81.7
Thhalv10013651m.g Eutrema salsugineum HOM05D006845 ORTHO05D009300 2.0e-202 709.1 423 78.0
arahy.Tifrunner.gnm1.ann1.61G52X Arachis hypogaea HOM05D006845 ORTHO05D009300 4.4e-202 708.0 418 77.0
FAN11G1119 Fragaria x ananassa HOM05D006845 ORTHO05D009300 7.5e-202 707.2 413 79.7
A10p11250 Brassica napus HOM05D006845 ORTHO05D009300 9.8e-202 706.8 423 77.8
Lj3g0006633 Lotus japonicus HOM05D006845 ORTHO05D009300 9.8e-202 706.8 423 78.0
C09p43870 Brassica napus HOM05D006845 ORTHO05D009300 2.2e-201 705.7 423 77.5
Sed0008037 Sechium edule HOM05D006845 ORTHO05D009300 3.7e-201 704.9 423 76.8
PSO541G3085 Papaver somniferum HOM05D006845 ORTHO05D009300 1.1e-200 703.4 424 75.2
PSO675G5588 Papaver somniferum HOM05D006845 ORTHO05D009300 1.1e-200 703.4 424 75.2
Carub.0008s1415 Capsella rubella HOM05D006845 ORTHO05D009300 1.4e-200 703.0 423 76.8
CARHR266990 Cardamine hirsuta HOM05D006845 ORTHO05D009300 1.4e-200 703.0 423 77.5
arahy.Tifrunner.gnm1.ann1.ME6152 Arachis hypogaea HOM05D006845 ORTHO05D009300 2.4e-200 702.2 418 76.3
BcaC04g20411 Brassica carinata HOM05D006845 ORTHO05D009300 2.4e-200 702.2 423 77.3
Glyma.12G225400 Glycine max HOM05D006845 ORTHO05D009300 2.4e-200 702.2 424 76.4
TWI39G1089 Tripterygium wilfordii HOM05D006845 ORTHO05D009300 2.4e-200 702.2 423 76.6
Migut.H01945 Erythranthe guttata HOM05D006845 ORTHO05D009300 4.1e-200 701.4 425 74.6
BcaB08g35745 Brassica carinata HOM05D006845 ORTHO05D009300 5.4e-200 701.0 423 77.1
CsaV3_4G033630 Cucumis sativus L. HOM05D006845 ORTHO05D009300 7.0e-200 700.7 423 76.6
MELO3C016692.2 Cucumis melo HOM05D006845 ORTHO05D009300 1.6e-199 699.5 419 76.1
FAN21G2917 Fragaria x ananassa HOM05D006845 ORTHO05D009300 2.0e-199 699.1 424 77.1
Lalb_Chr25g0286311 Lupinus albus HOM05D006845 ORTHO05D009300 5.9e-199 697.6 417 76.7
MSTRG.14352 Avicennia marina HOM05D006845 ORTHO05D009300 2.3e-198 695.7 425 75.1
AUR62039192 Chenopodium quinoa HOM05D006845 ORTHO05D009300 3.9e-198 694.9 424 75.2
Glyma.13G275900 Glycine max HOM05D006845 ORTHO05D009300 5.0e-198 694.5 424 75.7
THA.LOC104811867 Tarenaya hassleriana HOM05D006845 ORTHO05D009300 5.0e-198 694.5 423 77.3
CAN.G213.11 Capsicum annuum HOM05D006845 ORTHO05D009300 1.6e-196 689.5 421 75.8
MD03G1229200 Malus domestica HOM05D006845 ORTHO05D009300 1.4e-195 686.4 421 76.0
Aa31LG3G10070 Aethionema arabicum HOM05D006845 ORTHO05D009300 6.8e-195 684.1 402 79.4
EL10Ac4g08199 Beta vulgaris HOM05D006845 ORTHO05D009300 7.5e-194 680.6 423 72.6
FAN25G1923 Fragaria x ananassa HOM05D006845 ORTHO05D009300 1.3e-193 679.9 418 75.4
Oeu051072.2 Olea europaea HOM05D006845 ORTHO05D009300 4.9e-193 677.9 450 70.7
VMungo1080G1688 Vigna mungo HOM05D006845 ORTHO05D009300 1.4e-192 676.4 424 75.2
Aqoxy1G02380 Aquilegia oxysepala HOM05D006845 ORTHO05D009300 1.9e-192 676.0 423 73.8
AUR62019438 Chenopodium quinoa HOM05D006845 ORTHO05D009300 3.2e-192 675.2 412 74.3
Duzib213G0603 Durio zibethinus HOM05D006845 ORTHO05D009300 1.2e-191 673.3 423 74.5
Peaxi162Scf00000g00345 Petunia axillaris HOM05D006845 ORTHO05D009300 1.6e-191 672.9 425 75.5
HanXRQChr12g0364151 Helianthus annuus HOM05D006845 ORTHO05D009300 2.0e-191 672.5 424 71.9
Nitab4.5_0003378g0090 Nicotiana tabacum HOM05D006845 ORTHO05D009300 6.6e-190 667.5 425 74.1
Actinidia18770 Actinidia chinensis HOM05D006845 ORTHO05D009300 1.5e-189 666.4 388 77.3
Phvul.005G073100 Phaseolus vulgaris HOM05D006845 ORTHO05D009300 1.5e-189 666.4 424 73.6
DCAR_017135 Daucus carota HOM05D006845 ORTHO05D009300 1.9e-189 666.0 412 73.8
CDE02G1035 Ceratophyllum demersum HOM05D006845 ORTHO05D009300 2.8e-188 662.1 423 71.9
FAN16G0640 Fragaria x ananassa HOM05D006845 ORTHO05D009300 5.2e-187 657.9 413 75.3
Sabra16G0261500 Salix brachista HOM05D006845 ORTHO05D009300 8.9e-187 657.1 541 61.6
Lsat_1_v5_gn_9_97520 Lactuca sativa HOM05D006845 ORTHO05D009300 5.4e-184 647.9 412 72.3
ATR0737G060 Amborella trichopoda HOM05D006845 ORTHO05D009300 2.7e-183 645.6 422 69.2
BolC9t57269H Brassica oleracea HOM05D006845 ORTHO05D009300 3.5e-183 645.2 434 70.7
BraA10t43218Z Brassica rapa HOM05D006845 ORTHO05D009300 1.6e-180 636.3 468 66.7
Ca_03508_v3 Cicer arietinum L. HOM05D006845 ORTHO05D009300 1.7e-177 626.3 412 72.1
SGA_v2.0_scaffold70G23678 Striga asiatica HOM05D006845 ORTHO05D009300 1.9e-176 622.9 410 69.8
Ah.06g184430 Amaranthus hybridus HOM05D006845 ORTHO05D009300 2.1e-175 619.4 412 71.4
Nitab4.5_0000332g0060 Nicotiana tabacum HOM05D006845 ORTHO05D009300 3.4e-170 602.1 458 64.4
HPP92_003615 Vanilla planifolia HOM05D006845 ORTHO05D009300 9.3e-168 594.0 422 64.2
Actinidia35244 Actinidia chinensis HOM05D006845 ORTHO05D009300 1.7e-161 573.2 414 66.7
Psat5g242160 Pisum sativum HOM05D006845 ORTHO05D009300 2.9e-161 572.4 393 68.7
Medtr2g079060 Medicago truncatula HOM05D006845 ORTHO05D009300 9.6e-157 557.4 415 65.1
Lj1C841T8 Lonicera japonica HOM05D006845 ORTHO05D009300 1.5e-154 550.1 374 69.5
TPR.G7949 Trifolium pratense HOM05D006845 ORTHO05D009300 2.0e-154 549.7 364 71.7
Sc16g0007040 Simmondsia chinensis HOM05D006845 ORTHO05D009300 3.4e-154 548.9 312 79.5
Haze_09439 Corylus avellana HOM05D006845 ORTHO05D009300 7.4e-149 531.2 387 67.7
ECA240G2176 Erigeron canadensis HOM05D006845 ORTHO05D009300 2.1e-148 529.6 313 76.7
Cpa.g.sc80.77 Carica papaya HOM05D006845 ORTHO05D009300 6.7e-142 508.1 423 60.5
Cc05_g11930 Coffea canephora HOM05D006845 ORTHO05D009300 3.3e-96 356.3 214 75.2
BcaB07g33336 Brassica carinata HOM05D006845 ORTHO05D009300 1.2e-93 347.8 204 77.5
SEGI_13558 Sequoiadendron giganteum HOM05D006845 ORTHO05D009300 2.2e-92 343.6 346 44.2
Cc05_g11920 Coffea canephora HOM05D006845 ORTHO05D009300 4.9e-92 342.4 204 77.5
Pp3c1_32740 Physcomitrium patens HOM05D006845 ORTHO05D009300 2.4e-83 313.5 361 42.4
AagrBONN_evm.TU.Sc2ySwM_344.572 Anthoceros agrestis HOM05D006845 ORTHO05D009300 2.7e-82 310.1 347 42.4
Mapoly0037s0133 Marchantia polymorpha HOM05D006845 ORTHO05D009300 8.6e-73 278.5 369 36.3
SMO143G0137 Selaginella moellendorffii HOM05D006845 ORTHO05D009300 3.6e-63 246.5 280 42.5
unitig_899.g15568 Utricularia gibba HOM05D006845 ORTHO05D009300 9.0e-46 188.7 106 78.3
Lsat_1_v5_gn_7_87221 Lactuca sativa HOM05D003066 ORTHO05D004162 1.5e-37 161.4 103 68.9
Lsat_1_v5_gn_4_31781 Lactuca sativa HOM05D006845 ORTHO05D014206 1.7e-36 157.9 106 67.9
Lsat_1_v5_gn_5_134240 Lactuca sativa HOM05D006845 ORTHO05D014206 1.7e-36 157.9 106 67.9
Sabra11G0103000 Salix brachista HOM05D006845 ORTHO05D009300 1.7e-36 157.9 85 82.4
Lsat_1_v5_gn_7_62660 Lactuca sativa HOM05D006845 ORTHO05D014206 8.4e-36 155.6 103 68.0
BcaB04g16942 Brassica carinata HOM05D006845 ORTHO05D009300 4.3e-32 143.3 139 54.7
FAN12G2298 Fragaria x ananassa HOM05D006845 ORTHO05D014206 1.5e-13 81.6 48 70.8
FAN25G3098 Fragaria x ananassa HOM05D006845 ORTHO05D014206 1.0e-12 79.0 48 68.8
FAN05G4902 Fragaria x ananassa HOM05D006845 ORTHO05D014206 1.3e-12 78.6 49 67.3
MBI02_g32976_MAGBIO Magnolia biondii HOM05D000872 ORTHO05D014206 6.5e-12 76.3 56 60.7
Hma1.2p1_0554F.1_g177810 Hydrangea macrophylla HOM05D006845 ORTHO05D014206 2.7e-10 70.9 45 68.9
FAN09G2373 Fragaria x ananassa HOM05D006845 ORTHO05D014206 7.9e-10 69.3 47 61.7


User provided reference genes

Program Settings