Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGR083G0358 Punica granatum HOM05D007423 ORTHO05D009091 2.9e-142 508.4 236 100.0
Manes.18G046400 Manihot esculenta HOM05D007423 ORTHO05D009091 1.3e-91 340.1 240 65.0
Potri.014G016200 Populus trichocarpa HOM05D007423 ORTHO05D009091 3.7e-89 332.0 240 64.6
Sabra02G0093200 Salix brachista HOM05D007423 ORTHO05D009091 4.8e-89 331.6 240 65.0
TWI56G0135 Tripterygium wilfordii HOM05D007423 ORTHO05D009091 1.8e-88 329.7 240 66.2
Hma1.2p1_0819F.1_g223720 Hydrangea macrophylla HOM05D007423 ORTHO05D009091 9.0e-88 327.4 240 65.4
Dinv39224 Davidia involucrata HOM05D007423 ORTHO05D009091 2.0e-87 326.2 240 64.2
Eucgr.F00082 Eucalyptus grandis HOM05D007423 ORTHO05D009091 1.3e-86 323.6 249 64.3
TWI12G0330 Tripterygium wilfordii HOM05D007423 ORTHO05D009091 5.0e-86 321.6 240 64.2
Manes.05G181850 Manihot esculenta HOM05D007423 ORTHO05D009091 7.1e-85 317.8 241 60.6
TAR381G1462 Trochodendron aralioides HOM05D007423 ORTHO05D009091 1.2e-84 317.0 242 61.6
Gohir.D05G213200 Gossypium hirsutum HOM05D007423 ORTHO05D009091 1.6e-84 316.6 235 63.4
vmacro22056 Vaccinium macrocarpon HOM05D007423 ORTHO05D009091 2.1e-84 316.2 238 61.8
Thecc.08G089100 Theobroma cacao HOM05D007423 ORTHO05D009091 2.7e-84 315.8 235 63.0
COL.COLO4_28509 Corchorus olitorius HOM05D007423 ORTHO05D009091 1.8e-83 313.2 235 63.8
MELO3C010807.2 Cucumis melo HOM05D007423 ORTHO05D009091 1.8e-83 313.2 235 59.1
Gorai.009G219800 Gossypium raimondii HOM05D007423 ORTHO05D009091 2.3e-83 312.8 235 62.6
Atru.chr13.827 Acer truncatum HOM05D007423 ORTHO05D009091 3.0e-83 312.4 243 60.5
Duzib116G0599 Durio zibethinus HOM05D007423 ORTHO05D009091 3.0e-83 312.4 239 63.2
Gohir.A05G209900 Gossypium hirsutum HOM05D007423 ORTHO05D009091 3.0e-83 312.4 235 62.1
CsaV3_2G026150 Cucumis sativus L. HOM05D007423 ORTHO05D009091 3.9e-83 312.0 233 59.7
Oeu040517.1 Olea europaea HOM05D007423 ORTHO05D009091 3.9e-83 312.0 241 59.8
MSTRG.25038 Avicennia marina HOM05D007423 ORTHO05D009091 5.1e-83 311.6 241 59.8
GSVIVG01009345001 Vitis vinifera HOM05D007423 ORTHO05D009091 3.3e-82 308.9 234 64.1
Prupe.1G423100 Prunus persica HOM05D007423 ORTHO05D009091 5.7e-82 308.1 241 59.8
Phvul.001G027100 Phaseolus vulgaris HOM05D007423 ORTHO05D009091 7.4e-82 307.8 240 60.0
Duzib041G0474 Durio zibethinus HOM05D007423 ORTHO05D009091 9.7e-82 307.4 241 61.8
Glyma.14G088700 Glycine max HOM05D007423 ORTHO05D009091 2.8e-81 305.8 241 59.8
RcHm_v2.0_Chr6g0309541 Rosa chinensis HOM05D007423 ORTHO05D009091 3.7e-81 305.4 242 61.2
Oeu053610.1 Olea europaea HOM05D007423 ORTHO05D009091 8.2e-81 304.3 241 58.1
FAN15G1020 Fragaria x ananassa HOM05D007423 ORTHO05D009091 1.1e-80 303.9 242 60.3
FAN20G0463 Fragaria x ananassa HOM05D007423 ORTHO05D009091 1.1e-80 303.9 242 60.3
Lj5g0013479 Lotus japonicus HOM05D007423 ORTHO05D009091 1.1e-80 303.9 240 61.7
CSS0004105 Camellia sinensis var. sinensis HOM05D007423 ORTHO05D009091 1.8e-80 303.1 242 58.7
CSS0046798 Camellia sinensis var. sinensis HOM05D007423 ORTHO05D009091 1.8e-80 303.1 242 58.7
QL12p038053 Quercus lobata HOM05D007423 ORTHO05D009091 2.4e-80 302.8 240 61.2
FvH4_2g33130 Fragaria vesca HOM05D007423 ORTHO05D009091 4.1e-80 302.0 242 60.3
FAN24G2841 Fragaria x ananassa HOM05D007423 ORTHO05D009091 4.1e-80 302.0 242 60.3
VMungo0647G0208 Vigna mungo HOM05D007423 ORTHO05D009091 6.9e-80 301.2 240 57.9
Rhsim07G0220000 Rhododendron simsii HOM05D007423 ORTHO05D009091 9.0e-80 300.8 241 58.5
Medtr1g018140 Medicago truncatula HOM05D007423 ORTHO05D009091 1.2e-79 300.4 248 58.5
Sopen04g031440 Solanum pennellii HOM05D007423 ORTHO05D009091 1.2e-79 300.4 241 57.3
Haze_22440 Corylus avellana HOM05D007423 ORTHO05D009091 1.5e-79 300.1 235 59.6
FAN27G2505 Fragaria x ananassa HOM05D007423 ORTHO05D009091 1.5e-79 300.1 242 59.5
Potri.002G118700 Populus trichocarpa HOM05D007423 ORTHO05D009091 2.0e-79 299.7 233 60.9
PGSC0003DMG400010617 Solanum tuberosum HOM05D007423 ORTHO05D009091 3.4e-79 298.9 241 56.8
SalBow7G0003 Salvia bowleyana HOM05D007423 ORTHO05D009091 5.9e-79 298.1 238 58.8
Nn5g30581 Nelumbo nucifera HOM05D007423 ORTHO05D009091 2.2e-78 296.2 242 59.1
TPR.G3793 Trifolium pratense HOM05D007423 ORTHO05D009091 5.0e-78 295.0 248 57.7
Cfa013780 Carpinus fangiana HOM05D007423 ORTHO05D009091 6.5e-78 294.7 235 59.1
Cfa013781 Carpinus fangiana HOM05D007423 ORTHO05D009091 8.5e-78 294.3 235 58.7
Gorai.010G025800 Gossypium raimondii HOM05D007423 ORTHO05D009091 8.5e-78 294.3 242 58.3
Gohir.A06G024100 Gossypium hirsutum HOM05D007423 ORTHO05D009091 1.1e-77 293.9 242 58.7
Ciclev10001602m.g Citrus clementina HOM05D007423 ORTHO05D009091 1.4e-77 293.5 250 59.2
Gohir.D06G021200 Gossypium hirsutum HOM05D007423 ORTHO05D009091 1.4e-77 293.5 242 58.3
MD15G1070300 Malus domestica HOM05D007423 ORTHO05D009091 1.4e-77 293.5 236 56.8
Phvul.009G071100 Phaseolus vulgaris HOM05D007423 ORTHO05D009091 1.4e-77 293.5 240 58.8
CAN.G724.25 Capsicum annuum HOM05D007423 ORTHO05D009091 1.9e-77 293.1 242 55.4
Cc10_g05770 Coffea canephora HOM05D007423 ORTHO05D009091 2.1e-76 289.7 234 55.6
VMungo1309G2697 Vigna mungo HOM05D007423 ORTHO05D009091 3.6e-76 288.9 236 58.5
Cpa.g.c34911 Carica papaya HOM05D007423 ORTHO05D009091 3.9e-75 285.4 238 56.7
HanXRQChr05g0150951 Helianthus annuus HOM05D007423 ORTHO05D009091 8.8e-75 284.3 251 52.2
Nn1g04566 Nelumbo nucifera HOM05D007423 ORTHO05D009091 1.5e-74 283.5 243 58.8
Glyma.04G045200 Glycine max HOM05D007423 ORTHO05D009091 1.7e-73 280.0 240 57.9
CANSAT25G1658 Cannabis sativa HOM05D007423 ORTHO05D009091 3.7e-73 278.9 241 55.2
Duzib093G1102 Durio zibethinus HOM05D007423 ORTHO05D009091 8.2e-73 277.7 200 64.5
MD08G1084200 Malus domestica HOM05D007423 ORTHO05D009091 8.2e-73 277.7 243 52.3
Lsat_1_v5_gn_6_110881 Lactuca sativa HOM05D007423 ORTHO05D009091 6.9e-72 274.6 247 51.8
AT5G43190 Arabidopsis thaliana HOM05D007423 ORTHO05D009091 1.0e-70 270.8 248 53.6
SGA_v2.0_scaffold238G43961 Striga asiatica HOM05D007423 ORTHO05D009091 1.3e-70 270.4 236 55.1
MBI16_g07988_MAGBIO Magnolia biondii HOM05D007423 ORTHO05D009091 6.5e-70 268.1 244 54.9
Psat6g016240 Pisum sativum HOM05D007423 ORTHO05D009091 6.5e-70 268.1 223 59.6
CiPaw.07G175100 Carya illinoinensis HOM05D007423 ORTHO05D009091 1.1e-69 267.3 233 54.9
Sp2g08010 Schrenkiella parvula HOM05D007423 ORTHO05D009091 4.2e-69 265.4 252 51.6
Aa31LG9G13280 Aethionema arabicum HOM05D007423 ORTHO05D009091 9.4e-69 264.2 244 51.6
Migut.C00488 Erythranthe guttata HOM05D007423 ORTHO05D009091 1.6e-68 263.5 257 49.0
CARHR180670 Cardamine hirsuta HOM05D007423 ORTHO05D009091 3.6e-68 262.3 248 52.8
THA.LOC104814189 Tarenaya hassleriana HOM05D007423 ORTHO05D009091 3.6e-68 262.3 252 52.0
CSS0041295 Camellia sinensis var. sinensis HOM05D007423 ORTHO05D009091 3.9e-67 258.8 195 60.0
Carub.0008s0548 Capsella rubella HOM05D007423 ORTHO05D009091 3.9e-67 258.8 250 52.8
A09p20200 Brassica napus HOM05D007423 ORTHO05D009091 6.7e-67 258.1 244 52.0
BcaB07g31023 Brassica carinata HOM05D007423 ORTHO05D009091 8.8e-67 257.7 245 51.4
BcaC04g21943 Brassica carinata HOM05D007423 ORTHO05D009091 1.1e-66 257.3 246 51.6
BolC9t55461H Brassica oleracea HOM05D007423 ORTHO05D009091 1.1e-66 257.3 246 51.6
C09p25610 Brassica napus HOM05D007423 ORTHO05D009091 3.3e-66 255.8 247 51.4
AL8G17420 Arabidopsis lyrata HOM05D007423 ORTHO05D009091 1.7e-65 253.4 236 53.4
BraA09t37631Z Brassica rapa HOM05D007423 ORTHO05D009091 1.7e-65 253.4 244 51.2
DCAR_020047 Daucus carota HOM05D007423 ORTHO05D009091 5.9e-63 245.0 240 48.8
Lj4C71T2 Lonicera japonica HOM05D007423 ORTHO05D009091 1.2e-60 237.3 241 49.4
VMungo1080G1103 Vigna mungo HOM05D007423 ORTHO05D009091 3.6e-60 235.7 164 62.8
HPP92_007765 Vanilla planifolia HOM05D007423 ORTHO05D009091 2.0e-58 229.9 216 51.9
Actinidia22694 Actinidia chinensis HOM05D007423 ORTHO05D009091 8.8e-51 204.5 241 45.6
Actinidia10198 Actinidia chinensis HOM05D007423 ORTHO05D009091 1.6e-47 193.7 241 43.6
Dinv44955 Davidia involucrata HOM05D007423 ORTHO05D009091 2.9e-46 189.5 240 44.6
SEGI_08151 Sequoiadendron giganteum HOM05D002809 ORTHO05D009091 1.3e-41 174.1 245 38.0
EL10Ac1g02385 Beta vulgaris HOM05D007423 ORTHO05D009091 4.9e-41 172.2 197 47.7
Nitab4.5_0003176g0010 Nicotiana tabacum HOM05D007423 ORTHO05D009091 5.6e-37 158.7 152 51.3
ClCG08G016460 Citrullus lanatus HOM05D007423 ORTHO05D009091 8.9e-35 151.4 155 50.3
Glyma.06G045700 Glycine max HOM05D007423 ORTHO05D009091 2.0e-34 150.2 173 49.7
Mapoly0125s0029 Marchantia polymorpha HOM05D002809 ORTHO05D009091 1.3e-33 147.5 224 38.4
AUR62037474 Chenopodium quinoa HOM05D007423 ORTHO05D009091 1.8e-32 143.7 177 49.2
Lalb_Chr22g0355601 Lupinus albus HOM05D007423 ORTHO05D009091 9.2e-32 141.4 169 44.4
Nitab4.5_0000164g0030 Nicotiana tabacum HOM05D007423 ORTHO05D009091 3.5e-31 139.4 152 46.1
SMO361G0323 Selaginella moellendorffii HOM05D002809 ORTHO05D004939 7.6e-10 68.6 211 28.0
SMO304G0062 Selaginella moellendorffii HOM05D003005 ORTHO05D004170 6.4e-09 65.5 259 24.7
Mapoly0168s0028 Marchantia polymorpha HOM05D003005 ORTHO05D007546 1.4e-08 64.3 109 31.2
Pp3c22_13680 Physcomitrium patens HOM05D007753 ORTHO05D009385 3.2e-08 63.2 179 26.8
Pp3c26_380 Physcomitrium patens HOM05D002809 ORTHO05D007546 1.2e-07 61.2 166 27.1


User provided reference genes

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