Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGR083G0013 Punica granatum HOM05D006323 ORTHO05D007827 1.0e-273 946.0 452 100.0
Eucgr.F00088 Eucalyptus grandis HOM05D006323 ORTHO05D007827 7.3e-163 577.8 446 64.1
Haze_22429 Corylus avellana HOM05D006323 ORTHO05D007827 6.4e-159 564.7 456 62.3
CiPaw.07G174200 Carya illinoinensis HOM05D006323 ORTHO05D007827 8.4e-159 564.3 467 61.7
QL12p038177 Quercus lobata HOM05D006323 ORTHO05D007827 1.1e-155 553.9 459 59.7
Actinidia38108 Actinidia chinensis HOM05D006323 ORTHO05D007827 2.5e-155 552.7 455 61.1
Cfa013771 Carpinus fangiana HOM05D006323 ORTHO05D007827 6.2e-154 548.1 457 61.1
Dinv44950 Davidia involucrata HOM05D006323 ORTHO05D007827 1.4e-153 547.0 463 60.0
CSS0024022 Camellia sinensis var. sinensis HOM05D006323 ORTHO05D007827 5.8e-152 541.6 456 59.9
CSS0045238 Camellia sinensis var. sinensis HOM05D006323 ORTHO05D007827 1.7e-151 540.0 456 60.1
TAR381G0342 Trochodendron aralioides HOM05D006323 ORTHO05D007827 4.9e-151 538.5 466 58.8
MELO3C010800.2 Cucumis melo HOM05D006323 ORTHO05D007827 6.4e-151 538.1 455 58.0
TAR381G1608 Trochodendron aralioides HOM05D006323 ORTHO05D007827 1.1e-150 537.3 466 58.6
Hma1.2p1_0819F.1_g223630 Hydrangea macrophylla HOM05D006323 ORTHO05D007827 2.4e-150 536.2 456 60.1
ClCG08G016540 Citrullus lanatus HOM05D006323 ORTHO05D007827 5.5e-150 535.0 453 58.7
CsaV3_2G026070 Cucumis sativus L. HOM05D006323 ORTHO05D007827 2.1e-149 533.1 456 57.9
Sed0007452 Sechium edule HOM05D006323 ORTHO05D007827 5.6e-147 525.0 452 58.2
vmacro22049 Vaccinium macrocarpon HOM05D006323 ORTHO05D007827 4.0e-145 518.8 474 58.2
Nn5g30609 Nelumbo nucifera HOM05D006323 ORTHO05D007827 1.5e-144 516.9 463 57.2
Oeu016579.1 Olea europaea HOM05D006323 ORTHO05D007827 3.4e-144 515.8 448 57.6
CSS0010458 Camellia sinensis var. sinensis HOM05D006323 ORTHO05D007827 5.8e-144 515.0 469 56.7
CSS0050369 Camellia sinensis var. sinensis HOM05D006323 ORTHO05D007827 8.4e-143 511.1 467 57.0
PSO675G0675 Papaver somniferum HOM05D006323 ORTHO05D007827 9.3e-142 507.7 479 54.5
PSO541G5960 Papaver somniferum HOM05D006323 ORTHO05D007827 2.7e-141 506.1 467 54.6
Manes.18G047100 Manihot esculenta HOM05D006323 ORTHO05D007827 3.5e-141 505.8 444 57.2
arahy.Tifrunner.gnm1.ann1.JK4I75 Arachis hypogaea HOM05D006323 ORTHO05D007827 1.0e-140 504.2 479 54.3
Prupe.1G422100 Prunus persica HOM05D006323 ORTHO05D007827 6.7e-140 501.5 465 54.4
Migut.N02786 Erythranthe guttata HOM05D006323 ORTHO05D007827 1.1e-139 500.7 453 55.4
HanXRQChr10g0298611 Helianthus annuus HOM05D006323 ORTHO05D007827 1.5e-139 500.4 452 57.1
Cpa.g.sc142.34 Carica papaya HOM05D006323 ORTHO05D007827 9.7e-139 497.7 449 57.0
Cpa.g.sc142.31 Carica papaya HOM05D006323 ORTHO05D007827 1.3e-138 497.3 449 57.5
CANSAT25G0442 Cannabis sativa HOM05D006323 ORTHO05D007827 1.6e-138 496.9 465 54.8
Rhsim07G0219300 Rhododendron simsii HOM05D006323 ORTHO05D007827 2.2e-138 496.5 466 57.7
Potri.002G117900 Populus trichocarpa HOM05D006323 ORTHO05D007827 1.4e-137 493.8 442 56.8
Gorai.009G220400 Gossypium raimondii HOM05D006323 ORTHO05D007827 2.4e-137 493.0 458 54.8
Gohir.D05G213700 Gossypium hirsutum HOM05D006323 ORTHO05D007827 5.3e-137 491.9 458 55.0
Aqoxy6G02596 Aquilegia oxysepala HOM05D006323 ORTHO05D007827 6.9e-137 491.5 464 53.7
Gohir.A05G210400 Gossypium hirsutum HOM05D006323 ORTHO05D007827 6.9e-137 491.5 458 54.6
Nitab4.5_0003725g0070 Nicotiana tabacum HOM05D006323 ORTHO05D007827 1.5e-136 490.3 460 54.6
Duzib093G0619 Durio zibethinus HOM05D006323 ORTHO05D007827 2.0e-136 490.0 451 54.5
Thecc.08G088000 Theobroma cacao HOM05D006323 ORTHO05D007827 5.9e-136 488.4 456 54.4
Nitab4.5_0000497g0170 Nicotiana tabacum HOM05D006323 ORTHO05D007827 1.0e-135 487.6 463 55.1
Hund05295 Selenicereus undatus HOM05D006323 ORTHO05D007827 2.2e-135 486.5 447 56.6
Lj5g0017088 Lotus japonicus HOM05D006323 ORTHO05D007827 3.8e-135 485.7 471 55.0
Lalb_Chr14g0368151 Lupinus albus HOM05D006323 ORTHO05D007827 3.2e-134 482.6 475 53.3
TWI56G0563 Tripterygium wilfordii HOM05D006323 ORTHO05D007827 3.2e-134 482.6 454 55.3
Sabra02G0092600 Salix brachista HOM05D006323 ORTHO05D007827 9.4e-134 481.1 441 56.0
EL10Ac1g02373 Beta vulgaris HOM05D006323 ORTHO05D007827 1.0e-132 477.6 457 54.7
Ca_13213_v3 Cicer arietinum L. HOM05D006323 ORTHO05D007827 3.9e-132 475.7 477 53.5
Sopen04g031380 Solanum pennellii HOM05D006323 ORTHO05D007827 8.8e-132 474.6 452 53.5
Psat6g018000 Pisum sativum HOM05D006323 ORTHO05D007827 1.5e-131 473.8 472 53.0
PGSC0003DMG400010620 Solanum tuberosum HOM05D006323 ORTHO05D007827 1.5e-131 473.8 455 52.7
RcHm_v2.0_Chr6g0309741 Rosa chinensis HOM05D006323 ORTHO05D007827 1.9e-131 473.4 466 53.4
FvH4_2g32960 Fragaria vesca HOM05D006323 ORTHO05D007827 5.7e-131 471.9 459 52.7
Medtr1g017940 Medicago truncatula HOM05D006323 ORTHO05D007827 5.7e-131 471.9 472 53.8
FAN20G1244 Fragaria x ananassa HOM05D006323 ORTHO05D007827 2.8e-130 469.5 457 52.1
FAN24G0652 Fragaria x ananassa HOM05D006323 ORTHO05D007827 2.8e-130 469.5 460 52.6
SalBow2G0555 Salvia bowleyana HOM05D006323 ORTHO05D007827 6.3e-130 468.4 464 53.2
CAN.G724.32 Capsicum annuum HOM05D006323 ORTHO05D007827 5.3e-129 465.3 451 52.8
FAN27G3326 Fragaria x ananassa HOM05D006323 ORTHO05D007827 6.9e-129 464.9 457 51.9
SGA_v2.0_scaffold28G11834 Striga asiatica HOM05D006323 ORTHO05D007827 1.2e-128 464.2 458 53.1
Ciclev10001174m.g Citrus clementina HOM05D006323 ORTHO05D007827 5.9e-128 461.8 450 54.4
TPR.G13155 Trifolium pratense HOM05D006323 ORTHO05D007827 7.7e-128 461.5 469 52.0
FAN15G2783 Fragaria x ananassa HOM05D006323 ORTHO05D007827 1.7e-127 460.3 457 51.0
Lsat_1_v5_gn_1_1301 Lactuca sativa HOM05D006323 ORTHO05D007827 7.2e-126 454.9 461 52.3
Glyma.17G234600 Glycine max HOM05D006323 ORTHO05D007827 1.4e-124 450.7 460 51.5
Atru.chr13.839 Acer truncatum HOM05D006323 ORTHO05D007827 5.7e-123 445.3 447 53.2
Phvul.001G028300 Phaseolus vulgaris HOM05D006323 ORTHO05D007827 9.7e-123 444.5 459 50.3
THA.LOC104825780 Tarenaya hassleriana HOM05D006323 ORTHO05D007827 1.8e-121 440.3 441 51.7
GSVIVG01009337001 Vitis vinifera HOM05D006323 ORTHO05D007827 2.0e-120 436.8 455 52.7
arahy.Tifrunner.gnm1.ann1.694GR7 Arachis hypogaea HOM05D006323 ORTHO05D007827 1.0e-119 434.5 432 52.8
Glyma.14G089027 Glycine max HOM05D006323 ORTHO05D007827 4.7e-117 425.6 463 48.4
AUR62022472 Chenopodium quinoa HOM05D006323 ORTHO05D007827 3.7e-114 416.0 465 49.5
HPP92_013407 Vanilla planifolia HOM05D006323 ORTHO05D007827 3.7e-114 416.0 448 48.7
VMungo0647G1220 Vigna mungo HOM05D006323 ORTHO05D007827 2.0e-112 410.2 454 48.7
CDE04G3275 Ceratophyllum demersum HOM05D006323 ORTHO05D007827 5.9e-112 408.7 457 46.2
Carub.0003s1171 Capsella rubella HOM05D006323 ORTHO05D007827 2.9e-111 406.4 448 48.7
Ah.05g167080 Amaranthus hybridus HOM05D006323 ORTHO05D007827 4.2e-110 402.5 452 47.8
ATR0739G201 Amborella trichopoda HOM05D006323 ORTHO05D007827 2.0e-107 393.7 497 46.3
Sc26g0004210 Simmondsia chinensis HOM05D006323 ORTHO05D007827 3.3e-107 392.9 408 50.7
AL3G24000 Arabidopsis lyrata HOM05D006323 ORTHO05D007827 9.7e-107 391.3 446 48.0
Sp6g10510 Schrenkiella parvula HOM05D006323 ORTHO05D007827 6.3e-106 388.7 441 47.6
Thhalv10028685m.g Eutrema salsugineum HOM05D006323 ORTHO05D007827 4.1e-105 386.0 445 47.6
TAR625G0711 Trochodendron aralioides HOM05D006323 ORTHO05D007827 9.1e-105 384.8 441 47.8
Aa31LG5G21510 Aethionema arabicum HOM05D006323 ORTHO05D007827 1.1e-102 377.9 441 46.3
CARHR287100 Cardamine hirsuta HOM05D006323 ORTHO05D007827 4.2e-102 375.9 445 45.4
AT3G12350 Arabidopsis thaliana HOM05D006323 ORTHO05D007827 7.2e-102 375.2 449 46.1
QL05p065459 Quercus lobata HOM05D006323 ORTHO05D007827 2.1e-101 373.6 304 60.2
C03p33680 Brassica napus HOM05D006323 ORTHO05D007827 8.0e-101 371.7 444 46.6
BolC3t15688H Brassica oleracea HOM05D006323 ORTHO05D007827 8.0e-101 371.7 444 46.6
BcaC01g04786 Brassica carinata HOM05D006323 ORTHO05D007827 5.7e-99 365.5 442 45.2
BcaB01g02882 Brassica carinata HOM05D006323 ORTHO05D007827 1.4e-97 360.9 447 45.2
A03p27900 Brassica napus HOM05D006323 ORTHO05D007827 2.9e-95 353.2 444 44.1
BraA03t12002Z Brassica rapa HOM05D006323 ORTHO05D007827 2.5e-94 350.1 444 43.9
Lj4A71T64 Lonicera japonica HOM05D006323 ORTHO05D007827 4.2e-94 349.4 316 58.9
AUR62037416 Chenopodium quinoa HOM05D006323 ORTHO05D007827 5.7e-91 339.0 450 43.6
CAN.G724.31 Capsicum annuum HOM05D006323 ORTHO05D007827 7.0e-89 332.0 444 40.8
BcaC01g04794 Brassica carinata HOM05D006323 ORTHO05D007827 1.2e-88 331.3 442 42.5
HPP92_013383 Vanilla planifolia HOM05D006323 ORTHO05D007827 7.8e-88 328.6 363 46.6
Cc10_g05020 Coffea canephora HOM05D006323 ORTHO05D007827 1.1e-78 298.1 281 55.9
ECA247G3150 Erigeron canadensis HOM05D006323 ORTHO05D007827 3.1e-76 290.0 314 51.9
TAR628G0857 Trochodendron aralioides HOM05D006323 ORTHO05D007827 2.8e-69 266.9 287 48.8
Mapoly0007s0129 Marchantia polymorpha HOM05D006323 ORTHO05D007827 6.8e-68 262.3 491 34.0
COL.COLO4_28496 Corchorus olitorius HOM05D006323 ORTHO05D007827 1.3e-66 258.1 241 54.4
SEGI_30290 Sequoiadendron giganteum HOM05D006323 ORTHO05D007827 1.8e-60 237.7 330 41.5
unitig_8.g4874 Utricularia gibba HOM05D006323 ORTHO05D007827 2.4e-57 227.3 232 54.3
Os12g0511000 Oryza sativa ssp. japonica HOM05D006323 ORTHO05D007827 7.1e-57 225.7 375 38.9
Pp3c15_12240 Physcomitrium patens HOM05D006323 ORTHO05D007827 4.6e-56 223.0 514 31.5
AagrBONN_evm.TU.Sc2ySwM_362.2944 Anthoceros agrestis HOM05D006323 ORTHO05D007827 5.8e-51 206.1 459 28.5
Eucgr.L02719 Eucalyptus grandis HOM05D006323 ORTHO05D007827 1.6e-40 171.4 151 56.3
CBR_g25752 Chara braunii HOM05D006323 ORTHO05D007827 3.8e-34 150.2 554 24.0
HPP92_013381 Vanilla planifolia HOM05D006323 ORTHO05D007827 3.8e-34 150.2 196 42.9
FvH4_3g44630 Fragaria vesca HOM05D006323 ORTHO05D007827 7.1e-25 119.4 110 48.2
TAR623G1714 Trochodendron aralioides HOM05D006323 ORTHO05D007827 4.6e-24 116.7 105 51.4
COL.COLO4_28497 Corchorus olitorius HOM05D006323 ORTHO05D007827 8.7e-23 112.5 131 43.5
Lj5P501T7 Lonicera japonica HOM05D006323 ORTHO05D007827 3.3e-22 110.5 89 66.3
Lj1P1160T24 Lonicera japonica HOM05D006323 ORTHO05D007827 7.4e-22 109.4 71 74.6
Zm00001eb264620 Zea mays HOM05D006323 ORTHO05D007827 1.6e-21 108.2 239 33.5
unitig_8.g4875 Utricularia gibba HOM05D006323 ORTHO05D007827 2.8e-21 107.5 105 51.4
MD08G1081200 Malus domestica HOM05D006323 ORTHO05D007827 2.0e-19 101.3 124 46.0
Eucgr.C01112 Eucalyptus grandis HOM05D006323 ORTHO05D007827 3.4e-19 100.5 68 69.1
QL04p027551 Quercus lobata HOM05D006323 ORTHO05D007827 1.2e-16 92.0 90 48.9
SEGI_04434 Sequoiadendron giganteum HOM05D006323 ORTHO05D007827 6.1e-16 89.7 164 37.2
TAR623G1335 Trochodendron aralioides HOM05D006323 ORTHO05D007827 2.0e-14 84.7 80 51.2
Oeu037483.1 Olea europaea HOM05D006323 ORTHO05D007827 2.0e-11 74.7 127 40.2


User provided reference genes

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