Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGR080G0004 Punica granatum HOM05D007327 ORTHO05D009342 9.2e-187 656.8 334 100.0
PGR044G2476 Punica granatum HOM05D007327 ORTHO05D009342 1.2e-186 656.4 334 99.4
PGR100G0004 Punica granatum HOM05D007327 ORTHO05D009342 1.2e-186 656.4 334 99.4
Ciclev10001558m.g Citrus clementina HOM05D007327 ORTHO05D009342 1.6e-143 513.1 355 72.4
COL.COLO4_08563 Corchorus olitorius HOM05D007327 ORTHO05D009342 3.4e-141 505.4 355 71.5
Gohir.D01G089200 Gossypium hirsutum HOM05D007327 ORTHO05D009342 2.2e-140 502.7 354 71.5
Gorai.002G114900 Gossypium raimondii HOM05D007327 ORTHO05D009342 2.9e-140 502.3 354 71.5
Thecc.08G153100 Theobroma cacao HOM05D007327 ORTHO05D009342 6.5e-140 501.1 354 71.2
Eucgr.F04237 Eucalyptus grandis HOM05D007327 ORTHO05D009342 1.4e-139 500.0 355 67.9
Prupe.8G031100 Prunus persica HOM05D007327 ORTHO05D009342 1.6e-138 496.5 355 66.8
Manes.18G092400 Manihot esculenta HOM05D007327 ORTHO05D009342 2.1e-138 496.1 354 67.2
Gohir.A01G103900 Gossypium hirsutum HOM05D007327 ORTHO05D009342 3.5e-138 495.4 354 70.6
Dinv25868 Davidia involucrata HOM05D007327 ORTHO05D009342 6.0e-138 494.6 361 66.8
GSVIVG01034535001 Vitis vinifera HOM05D007327 ORTHO05D009342 2.3e-137 492.7 352 67.9
CSS0015629 Camellia sinensis var. sinensis HOM05D007327 ORTHO05D009342 9.6e-136 487.3 354 68.9
Potri.002G067900 Populus trichocarpa HOM05D007327 ORTHO05D009342 2.1e-135 486.1 352 69.9
Atru.chr13.2102 Acer truncatum HOM05D007327 ORTHO05D009342 2.8e-135 485.7 355 69.6
Cfa018321 Carpinus fangiana HOM05D007327 ORTHO05D009342 2.8e-135 485.7 355 65.6
Hma1.2p1_0105F.1_g050650 Hydrangea macrophylla HOM05D007327 ORTHO05D009342 4.1e-134 481.9 352 65.9
TAR628G0726 Trochodendron aralioides HOM05D007327 ORTHO05D009342 1.2e-133 480.3 356 64.9
Actinidia17791 Actinidia chinensis HOM05D007327 ORTHO05D009342 5.0e-132 474.9 354 64.1
TWI60G1090 Tripterygium wilfordii HOM05D007327 ORTHO05D009342 6.5e-132 474.6 354 63.8
RcHm_v2.0_Chr6g0275381 Rosa chinensis HOM05D007327 ORTHO05D009342 1.1e-131 473.8 353 63.5
FvH4_2g13700 Fragaria vesca HOM05D007327 ORTHO05D009342 3.2e-131 472.2 354 63.6
MD05G1026600 Malus domestica HOM05D007327 ORTHO05D009342 1.2e-130 470.3 355 63.9
CANSAT25G1895 Cannabis sativa HOM05D007327 ORTHO05D009342 6.1e-130 468.0 355 61.4
Sed0007638 Sechium edule HOM05D007327 ORTHO05D009342 2.3e-129 466.1 354 62.1
arahy.Tifrunner.gnm1.ann1.S2I56E Arachis hypogaea HOM05D007327 ORTHO05D009342 9.7e-128 460.7 353 66.6
HanXRQChr04g0108941 Helianthus annuus HOM05D007327 ORTHO05D009342 9.7e-128 460.7 353 60.3
Duzib093G0512 Durio zibethinus HOM05D007327 ORTHO05D009342 1.3e-127 460.3 336 72.0
ECA247G1449 Erigeron canadensis HOM05D007327 ORTHO05D009342 1.6e-127 459.9 354 61.3
Peaxi162Scf00599g00511 Petunia axillaris HOM05D007327 ORTHO05D009342 3.7e-127 458.8 351 61.8
Nn5g28751 Nelumbo nucifera HOM05D007327 ORTHO05D009342 6.3e-127 458.0 352 63.4
arahy.Tifrunner.gnm1.ann1.LUB646 Arachis hypogaea HOM05D007327 ORTHO05D009342 1.8e-126 456.4 353 66.3
Lalb_Chr19g0130241 Lupinus albus HOM05D007327 ORTHO05D009342 1.8e-126 456.4 354 66.4
Glyma.02G081500 Glycine max HOM05D007327 ORTHO05D009342 2.4e-126 456.1 352 63.1
CiPaw.15G016000 Carya illinoinensis HOM05D007327 ORTHO05D009342 9.0e-126 454.1 331 65.3
CsaV3_6G005130 Cucumis sativus L. HOM05D007327 ORTHO05D009342 2.0e-125 453.0 352 61.9
Lsat_1_v5_gn_1_6021 Lactuca sativa HOM05D007327 ORTHO05D009342 7.7e-125 451.1 351 58.7
Phvul.004G094900 Phaseolus vulgaris HOM05D007327 ORTHO05D009342 1.7e-124 449.9 352 66.2
QL02p039069 Quercus lobata HOM05D007327 ORTHO05D009342 3.2e-123 445.7 454 50.9
Oeu051268.1 Olea europaea HOM05D007327 ORTHO05D009342 4.2e-123 445.3 385 57.4
FAN15G0044 Fragaria x ananassa HOM05D007327 ORTHO05D009342 7.2e-123 444.5 418 53.8
FAN24G0347 Fragaria x ananassa HOM05D007327 ORTHO05D009342 9.4e-123 444.1 418 53.8
MELO3C029831.2 Cucumis melo HOM05D007327 ORTHO05D009342 1.6e-122 443.4 352 60.2
Solyc04g071470.3 Solanum lycopersicum HOM05D007327 ORTHO05D009342 3.6e-122 442.2 352 59.1
Lj2g0012645 Lotus japonicus HOM05D007327 ORTHO05D009342 1.8e-121 439.9 353 65.4
Sopen04g027430 Solanum pennellii HOM05D007327 ORTHO05D009342 1.8e-121 439.9 352 59.1
Psat1g101680 Pisum sativum HOM05D007327 ORTHO05D009342 1.5e-120 436.8 352 59.9
TPR.G31184 Trifolium pratense HOM05D007327 ORTHO05D009342 5.7e-120 434.9 353 60.9
PSO541G6301 Papaver somniferum HOM05D007327 ORTHO05D009342 9.7e-120 434.1 358 58.1
ATR0582G033 Amborella trichopoda HOM05D007327 ORTHO05D009342 1.2e-117 427.2 352 57.7
Nitab4.5_0002452g0030 Nicotiana tabacum HOM05D007327 ORTHO05D009342 1.0e-116 424.1 365 56.2
SGA_v2.0_scaffold24G10336 Striga asiatica HOM05D007327 ORTHO05D009342 1.0e-116 424.1 354 58.8
HPP92_000065 Vanilla planifolia HOM05D007327 ORTHO05D009342 6.5e-116 421.4 353 57.8
Medtr6g036750 Medicago truncatula HOM05D007327 ORTHO05D009342 1.1e-115 420.6 352 58.2
Aqoxy6G00379 Aquilegia oxysepala HOM05D007327 ORTHO05D009342 3.0e-113 412.5 321 60.7
Os01g0867200 Oryza sativa ssp. japonica HOM05D007327 ORTHO05D009342 5.1e-113 411.8 352 55.1
Zm00001eb146700 Zea mays HOM05D007327 ORTHO05D009342 3.1e-110 402.5 362 54.7
Hund26695 Selenicereus undatus HOM05D007327 ORTHO05D009342 5.5e-107 391.7 342 57.6
Haze_17755 Corylus avellana HOM05D007327 ORTHO05D009342 1.8e-105 386.7 502 44.4
PSO675G1203 Papaver somniferum HOM05D007327 ORTHO05D009342 2.3e-105 386.3 360 53.3
Cc10_g14850 Coffea canephora HOM05D007327 ORTHO05D009342 2.2e-100 369.8 287 63.4
ClCG08G007070 Citrullus lanatus HOM05D007327 ORTHO05D009342 9.4e-99 364.4 457 45.3
unitig_26.g9897 Utricularia gibba HOM05D007327 ORTHO05D009342 1.1e-78 297.7 283 53.7
Glyma.16G166900 Glycine max HOM05D007327 ORTHO05D009342 6.2e-74 282.0 192 68.8
SMO335G0004 Selaginella moellendorffii HOM05D007327 ORTHO05D009342 4.9e-71 272.3 368 41.0
Sabra02G0053500 Salix brachista HOM05D007327 ORTHO05D009342 6.4e-71 271.9 232 58.2
Pp3c20_20940 Physcomitrium patens HOM05D007327 ORTHO05D009342 8.3e-71 271.6 360 40.3
VMungo0464G2010 Vigna mungo HOM05D007327 ORTHO05D009342 3.1e-65 253.1 216 58.8
Ca_25918_v3 Cicer arietinum L. HOM05D007327 ORTHO05D009342 6.8e-65 251.9 189 62.4
SalBow7G2928 Salvia bowleyana HOM05D007327 ORTHO05D009342 4.4e-64 249.2 325 44.9
SHI09061 Sapria himalayana HOM05D007327 ORTHO05D009342 5.2e-57 225.7 253 49.0
Cc00_g31580 Coffea canephora HOM05D007327 ORTHO05D009342 1.2e-53 214.5 141 70.2
DCAR_010093 Daucus carota HOM05D007327 ORTHO05D009342 3.5e-53 213.0 163 61.3
Cpa.g.sc21.198 Carica papaya HOM05D007327 ORTHO05D009342 9.6e-51 204.9 160 70.6
AagrBONN_evm.TU.Sc2ySwM_344.2825 Anthoceros agrestis HOM05D007327 ORTHO05D009342 6.2e-50 202.2 231 45.0
Migut.C00996 Erythranthe guttata HOM05D007327 ORTHO05D009342 3.1e-49 199.9 147 59.9
SMO228G0199 Selaginella moellendorffii HOM05D007327 ORTHO05D009342 5.2e-49 199.1 345 35.7
Cpa.g.c33136.2 Carica papaya HOM05D007327 ORTHO05D009342 3.9e-44 183.0 106 80.2
MCO03G524 Micromonas commoda HOM05D007327 ORTHO05D009342 5.3e-33 146.0 424 26.9
Glyma.16G166950 Glycine max HOM05D007327 ORTHO05D009342 1.2e-29 134.8 107 63.6
SalBow7G1135 Salvia bowleyana HOM05D007327 ORTHO05D009342 7.9e-29 132.1 103 65.0
MBI17_g25900_MAGBIO Magnolia biondii HOM05D007327 ORTHO05D009342 2.3e-28 130.6 102 60.8
SEGI_20996 Sequoiadendron giganteum HOM05D007327 ORTHO05D009342 1.5e-27 127.9 105 55.2
MBI17_g33124_MAGBIO Magnolia biondii HOM05D007327 ORTHO05D009342 2.8e-26 123.6 113 54.9
PRCOL_00001255 Prasinoderma coloniale HOM05D007327 ORTHO05D009342 1.1e-25 121.7 396 28.0
CSS0013095 Camellia sinensis var. sinensis HOM05D007327 ORTHO05D009342 4.9e-23 112.8 68 77.9
CSS0009897 Camellia sinensis var. sinensis HOM05D007327 ORTHO05D009342 6.5e-23 112.5 68 76.5
CSS0040121 Camellia sinensis var. sinensis HOM05D007327 ORTHO05D009342 1.9e-22 110.9 68 76.5
CSS0048751 Camellia sinensis var. sinensis HOM05D007327 ORTHO05D009342 5.5e-22 109.4 68 76.5
PSO541G3507 Papaver somniferum HOM05D000022 ORTHO05D000071 8.7e-20 102.1 55 80.0
SEGI_01400 Sequoiadendron giganteum HOM05D007327 ORTHO05D009342 1.9e-19 100.9 104 46.2
HPP92_000064 Vanilla planifolia HOM05D007327 ORTHO05D009342 2.5e-19 100.5 75 61.3
MBI17_g33117_MAGBIO Magnolia biondii HOM05D007327 ORTHO05D009342 4.8e-18 96.3 51 74.5
Cc07_g11820 Coffea canephora HOM05D007327 ORTHO05D009342 3.1e-17 93.6 49 71.4
Cc10_g14400 Coffea canephora HOM05D007327 ORTHO05D009342 3.1e-17 93.6 49 71.4
CSS0014849 Camellia sinensis var. sinensis HOM05D007327 ORTHO05D009342 1.2e-16 91.7 89 56.2
MBI09_g12042_MAGBIO Magnolia biondii HOM05D007327 ORTHO05D009342 1.2e-16 91.7 64 62.5
CDE02G1931 Ceratophyllum demersum HOM05D007327 ORTHO05D009342 7.6e-16 89.0 50 74.0
MBI17_g33120_MAGBIO Magnolia biondii HOM05D007327 ORTHO05D009342 2.1e-13 80.9 94 42.6
SEGI_01531 Sequoiadendron giganteum HOM05D007327 ORTHO05D009342 3.6e-13 80.1 54 61.1
Cre12.g548350 Chlamydomonas reinhardtii HOM05D007327 ORTHO05D009342 7.4e-11 72.4 162 30.9
Actinidia27255 Actinidia chinensis HOM05D007327 ORTHO05D009342 1.3e-10 71.6 164 34.8
arahy.Tifrunner.gnm1.ann1.B7BSQF Arachis hypogaea HOM05D000002 ORTHO05D000047 5.3e-09 66.2 180 28.9
arahy.Tifrunner.gnm1.ann1.KIIE1S Arachis hypogaea HOM05D000198 ORTHO05D003365 7.7e-08 62.4 58 55.2


User provided reference genes

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