Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGR028G0024 Punica granatum HOM05D009131 ORTHO05D011137 1.8e-122 442.6 221 100.0
PGR069G0015 Punica granatum HOM05D009131 ORTHO05D011137 1.8e-122 442.6 221 100.0
PGR069G0016 Punica granatum HOM05D009131 ORTHO05D011137 1.8e-122 442.6 221 100.0
PGR071G0006 Punica granatum HOM05D004537 ORTHO05D005492 1.8e-122 442.6 221 100.0
GSVIVG01004978001 Vitis vinifera HOM05D005210 ORTHO05D010080 1.1e-31 141.0 169 46.2
Lj2P1230T116 Lonicera japonica HOM05D009131 ORTHO05D011137 3.4e-28 129.4 168 44.6
AT2G07695 Arabidopsis thaliana HOM05D004291 ORTHO05D005620 9.8e-28 127.9 191 40.8
ATMG01280 Arabidopsis thaliana HOM05D004291 ORTHO05D005620 1.7e-27 127.1 191 40.8
LjContig00315g0007090 Lotus japonicus HOM05D009131 ORTHO05D011137 3.7e-27 125.9 151 45.0
LjContig00439g0010199 Lotus japonicus HOM05D009131 ORTHO05D011137 3.7e-27 125.9 151 45.0
BolSC28t60388H Brassica oleracea HOM05D009131 ORTHO05D011137 6.0e-25 118.6 144 45.8
SGA_v2.0_scaffold477G52170 Striga asiatica HOM05D009131 ORTHO05D011137 6.0e-25 118.6 188 36.7
CAN.G950.4 Capsicum annuum HOM05D009131 ORTHO05D011137 1.7e-24 117.1 199 38.2
CARHR283480 Cardamine hirsuta HOM05D004291 ORTHO05D005620 3.0e-24 116.3 188 38.3
Ah.10g028820 Amaranthus hybridus HOM05D004291 ORTHO05D005620 3.9e-24 115.9 165 36.4
Solyc00g500099.1 Solanum lycopersicum HOM05D009131 ORTHO05D011137 5.0e-24 115.5 153 41.8
Solyc00g500272.1 Solanum lycopersicum HOM05D009131 ORTHO05D011137 5.0e-24 115.5 153 41.8
Solyc00g500318.1 Solanum lycopersicum HOM05D009131 ORTHO05D011137 5.0e-24 115.5 153 41.8
Solyc00g500361.1 Solanum lycopersicum HOM05D001325 ORTHO05D011137 5.0e-24 115.5 153 41.8
Lsat_1_v5_gn_1_2620 Lactuca sativa HOM05D009131 ORTHO05D011137 1.1e-23 114.4 149 40.9
Lsat_1_v5_gn_7_25441 Lactuca sativa HOM05D009131 ORTHO05D011137 1.1e-23 114.4 149 40.9
ECA041G0003 Erigeron canadensis HOM05D001560 ORTHO05D004675 1.5e-23 114.0 188 39.4
Solyc00g500116.1 Solanum lycopersicum HOM05D009131 ORTHO05D011137 9.5e-23 111.3 153 40.5
CARHR287230 Cardamine hirsuta HOM05D009131 ORTHO05D011137 8.1e-22 108.2 139 40.3
PGSC0003DMG400034591 Solanum tuberosum HOM05D009131 ORTHO05D011137 1.8e-21 107.1 153 39.2
PGSC0003DMG402008771 Solanum tuberosum HOM05D009131 ORTHO05D011137 1.8e-21 107.1 153 39.2
Ah.10g028620 Amaranthus hybridus HOM05D004291 ORTHO05D005620 1.2e-20 104.4 157 35.0
A04p09520 Brassica napus HOM05D009131 ORTHO05D011137 1.5e-20 104.0 128 45.3
Ah.03g144220 Amaranthus hybridus HOM05D009131 ORTHO05D011137 3.4e-20 102.8 234 31.2
Lsat_1_v5_gn_5_16481 Lactuca sativa HOM05D009131 ORTHO05D011137 1.9e-18 97.1 116 44.0
Solyc00g500170.1 Solanum lycopersicum HOM05D009131 ORTHO05D011137 3.2e-18 96.3 158 36.1
HanXRQMTg0579611 Helianthus annuus HOM05D009131 ORTHO05D011137 1.2e-17 94.4 149 38.3
CsaV3_UNG208550 Cucumis sativus L. HOM05D000533 ORTHO05D001069 4.3e-15 85.9 125 40.8
MELO3C027715.2 Cucumis melo HOM05D000743 ORTHO05D011137 2.2e-11 73.6 142 28.9
CsaV3_UNG208200 Cucumis sativus L. HOM05D009131 ORTHO05D011137 3.8e-11 72.8 149 32.9
unitig_87.g27976 Utricularia gibba HOM05D009131 ORTHO05D011137 7.8e-09 65.1 140 27.1
Eucgr.I01853 Eucalyptus grandis HOM05D009131 ORTHO05D011137 1.3e-08 64.3 60 46.7
CAN.G1167.18 Capsicum annuum HOM05D009131 ORTHO05D011137 6.6e-08 62.0 175 29.7
Solyc02g085520.4 Solanum lycopersicum HOM05D003478 ORTHO05D004196 2.5e-07 60.1 78 39.7
SHI29301 Sapria himalayana HOM05D008814 ORTHO05D010812 2.8e-06 56.6 68 39.7
CAN.G1109.13 Capsicum annuum HOM05D009131 ORTHO05D011137 3.6e-06 56.2 176 31.2


User provided reference genes

Program Settings