Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGR044G2737 Punica granatum HOM05D006193 ORTHO05D007808 2.0e-65 252.3 127 100.0
Thecc.10G076000 Theobroma cacao HOM05D006193 ORTHO05D007808 8.1e-51 203.8 129 78.3
Gohir.D06G175300 Gossypium hirsutum HOM05D006193 ORTHO05D007808 6.9e-50 200.7 130 76.2
Gorai.010G205700 Gossypium raimondii HOM05D006193 ORTHO05D007808 6.9e-50 200.7 130 76.2
Duzib114G0385 Durio zibethinus HOM05D006193 ORTHO05D007808 1.2e-49 199.9 129 76.7
Gohir.A06G167900 Gossypium hirsutum HOM05D006193 ORTHO05D007808 1.3e-48 196.4 130 74.6
Manes.10G047101 Manihot esculenta HOM05D006193 ORTHO05D007808 3.8e-48 194.9 127 75.6
TAR623G1160 Trochodendron aralioides HOM05D006193 ORTHO05D007808 8.4e-48 193.7 126 75.4
Cfa001656 Carpinus fangiana HOM05D006193 ORTHO05D007808 1.1e-47 193.4 125 73.6
Duzib128G0799 Durio zibethinus HOM05D006193 ORTHO05D007808 1.1e-47 193.4 143 71.3
Haze_16878 Corylus avellana HOM05D006193 ORTHO05D007808 4.2e-47 191.4 129 72.9
Ciclev10033053m.g Citrus clementina HOM05D006193 ORTHO05D007808 1.6e-46 189.5 125 73.6
Cfa001990 Carpinus fangiana HOM05D006193 ORTHO05D007808 2.1e-46 189.1 129 71.3
Eucgr.J01081 Eucalyptus grandis HOM05D006193 ORTHO05D007808 3.5e-46 188.3 125 73.6
COL.COLO4_28414 Corchorus olitorius HOM05D006193 ORTHO05D007808 4.6e-46 188.0 129 74.4
Atru.chr12.797 Acer truncatum HOM05D006193 ORTHO05D007808 1.0e-45 186.8 126 73.8
Actinidia38857 Actinidia chinensis HOM05D006193 ORTHO05D007808 1.0e-45 186.8 127 71.7
Nn2g10831 Nelumbo nucifera HOM05D006193 ORTHO05D007808 2.3e-45 185.7 126 72.2
TAR369G0988 Trochodendron aralioides HOM05D006193 ORTHO05D007808 3.0e-45 185.3 123 73.2
HanXRQChr01g0023971 Helianthus annuus HOM05D006193 ORTHO05D007808 3.9e-45 184.9 106 81.1
MSTRG.27474 Avicennia marina HOM05D006193 ORTHO05D007808 5.1e-45 184.5 125 74.4
Lsat_1_v5_gn_1_77620 Lactuca sativa HOM05D006193 ORTHO05D007808 6.6e-45 184.1 127 70.1
Solyc03g007490.3 Solanum lycopersicum HOM05D006193 ORTHO05D007808 8.7e-45 183.7 132 72.0
CiPaw.02G173400 Carya illinoinensis HOM05D006193 ORTHO05D007808 1.1e-44 183.3 102 83.3
HanXRQChr08g0229761 Helianthus annuus HOM05D006193 ORTHO05D007808 1.1e-44 183.3 108 79.6
TWI63G1140 Tripterygium wilfordii HOM05D006193 ORTHO05D007808 1.1e-44 183.3 124 69.4
Sopen03g003450 Solanum pennellii HOM05D006193 ORTHO05D007808 1.5e-44 183.0 132 72.0
ECA248G2014 Erigeron canadensis HOM05D006193 ORTHO05D007808 2.5e-44 182.2 106 78.3
QL08p055470 Quercus lobata HOM05D006193 ORTHO05D007808 5.6e-44 181.0 128 71.9
MBI07_g44648_MAGBIO Magnolia biondii HOM05D006193 ORTHO05D007808 7.3e-44 180.6 108 78.7
RcHm_v2.0_Chr1g0363061 Rosa chinensis HOM05D006193 ORTHO05D007808 7.3e-44 180.6 108 79.6
SalBow4G2149 Salvia bowleyana HOM05D006193 ORTHO05D007808 2.1e-43 179.1 107 79.4
SGA_v2.0_scaffold355G49780 Striga asiatica HOM05D006193 ORTHO05D007808 2.1e-43 179.1 116 75.0
Lj5g0007819 Lotus japonicus HOM05D006193 ORTHO05D007808 2.8e-43 178.7 106 78.3
FvH4_7g19210 Fragaria vesca HOM05D006193 ORTHO05D007808 3.6e-43 178.3 106 79.2
Prupe.2G212200 Prunus persica HOM05D006193 ORTHO05D007808 3.6e-43 178.3 101 79.2
CAN.G108.21 Capsicum annuum HOM05D006193 ORTHO05D007808 4.8e-43 177.9 129 70.5
CSS0007064 Camellia sinensis var. sinensis HOM05D006193 ORTHO05D007808 6.2e-43 177.6 136 66.2
Migut.D01650 Erythranthe guttata HOM05D006193 ORTHO05D007808 6.2e-43 177.6 133 68.4
Sed0026413 Sechium edule HOM05D006193 ORTHO05D007808 6.2e-43 177.6 126 69.0
ATR0329G030 Amborella trichopoda HOM05D006193 ORTHO05D007808 8.1e-43 177.2 108 76.9
Cc02_g11260 Coffea canephora HOM05D006193 ORTHO05D007808 8.1e-43 177.2 127 70.9
Migut.F01979 Erythranthe guttata HOM05D006193 ORTHO05D007808 8.1e-43 177.2 116 74.1
Peaxi162Scf00011g01839 Petunia axillaris HOM05D006193 ORTHO05D007808 8.1e-43 177.2 132 68.9
Sed0026653 Sechium edule HOM05D006193 ORTHO05D007808 1.1e-42 176.8 127 69.3
THA.LOC104808680 Tarenaya hassleriana HOM05D006193 ORTHO05D007808 1.1e-42 176.8 126 71.4
Nitab4.5_0006507g0010 Nicotiana tabacum HOM05D006193 ORTHO05D007808 1.4e-42 176.4 132 68.9
FAN10G2131 Fragaria x ananassa HOM05D006509 ORTHO05D008144 1.8e-42 176.0 106 78.3
FAN10G3587 Fragaria x ananassa HOM05D006509 ORTHO05D007808 1.8e-42 176.0 106 78.3
TPR.G1973 Trifolium pratense HOM05D006193 ORTHO05D007808 1.8e-42 176.0 115 73.0
DCAR_016552 Daucus carota HOM05D006193 ORTHO05D007808 3.1e-42 175.3 105 77.1
arahy.Tifrunner.gnm1.ann1.4G5N71 Arachis hypogaea HOM05D006193 ORTHO05D007808 5.3e-42 174.5 129 66.7
Peaxi162Scf00370g00117 Petunia axillaris HOM05D006193 ORTHO05D007808 5.3e-42 174.5 132 68.2
PGSC0003DMG400009070 Solanum tuberosum HOM05D006193 ORTHO05D007808 5.3e-42 174.5 123 73.2
MD01G1107500 Malus domestica HOM05D006193 ORTHO05D007808 6.9e-42 174.1 115 73.9
Glyma.20G180500 Glycine max HOM05D006193 ORTHO05D007808 1.5e-41 172.9 101 80.2
Lalb_Chr01g0009491 Lupinus albus HOM05D006193 ORTHO05D007808 1.5e-41 172.9 104 76.9
PSO832G3015 Papaver somniferum HOM05D006193 ORTHO05D007808 2.0e-41 172.6 127 65.4
CiPaw.16G031600 Carya illinoinensis HOM05D006193 ORTHO05D007808 3.4e-41 171.8 119 73.9
Glyma.10G210100 Glycine max HOM05D006193 ORTHO05D007808 4.5e-41 171.4 101 78.2
Nitab4.5_0000071g0090 Nicotiana tabacum HOM05D006193 ORTHO05D007808 4.5e-41 171.4 129 68.2
Potri.010G223700 Populus trichocarpa HOM05D006193 ORTHO05D007808 4.5e-41 171.4 127 68.5
Phvul.007G095900 Phaseolus vulgaris HOM05D006193 ORTHO05D007808 5.8e-41 171.0 101 78.2
arahy.Tifrunner.gnm1.ann1.889ECD Arachis hypogaea HOM05D006193 ORTHO05D007808 7.6e-41 170.6 129 65.9
VMungo0720G0734 Vigna mungo HOM05D006193 ORTHO05D007808 7.6e-41 170.6 101 78.2
PSO210G4078 Papaver somniferum HOM05D006193 ORTHO05D007808 9.9e-41 170.2 106 72.6
ClCG05G021080 Citrullus lanatus HOM05D006193 ORTHO05D007808 1.3e-40 169.9 156 59.6
Hund05693 Selenicereus undatus HOM05D006193 ORTHO05D007808 1.7e-40 169.5 100 82.0
HPP92_011207 Vanilla planifolia HOM05D006193 ORTHO05D007808 2.2e-40 169.1 105 74.3
BcaB04g18121 Brassica carinata HOM05D006193 ORTHO05D007808 3.8e-40 168.3 121 66.9
Oeu014384.2 Olea europaea HOM05D006193 ORTHO05D007808 3.8e-40 168.3 157 58.6
AL7G42250 Arabidopsis lyrata HOM05D006193 ORTHO05D007808 4.9e-40 167.9 105 73.3
AT4G14145 Arabidopsis thaliana HOM05D006193 ORTHO05D007808 4.9e-40 167.9 111 70.3
Thhalv10026557m.g Eutrema salsugineum HOM05D006193 ORTHO05D007808 6.4e-40 167.5 107 72.9
A08p10360 Brassica napus HOM05D006193 ORTHO05D007808 8.4e-40 167.2 122 65.6
unitig_37.g12308 Utricularia gibba HOM05D006193 ORTHO05D007808 8.4e-40 167.2 105 75.2
BcaC07g37722 Brassica carinata HOM05D006193 ORTHO05D007808 1.1e-39 166.8 121 66.1
BolC8t48104H Brassica oleracea HOM05D006193 ORTHO05D007808 1.1e-39 166.8 121 66.1
BraA08t33036Z Brassica rapa HOM05D006193 ORTHO05D007808 1.1e-39 166.8 121 66.1
Carub.0007s2828 Capsella rubella HOM05D006193 ORTHO05D007808 1.1e-39 166.8 100 76.0
Oeu042739.1 Olea europaea HOM05D006193 ORTHO05D007808 1.9e-39 166.0 124 68.5
Aqoxy1G03645 Aquilegia oxysepala HOM05D006193 ORTHO05D007808 2.4e-39 165.6 119 68.1
Sp7g11980 Schrenkiella parvula HOM05D006193 ORTHO05D007808 2.4e-39 165.6 133 63.2
Aa31LG9G3240 Aethionema arabicum HOM05D006193 ORTHO05D007808 5.4e-39 164.5 103 73.8
CANSAT54G0886 Cannabis sativa HOM05D006193 ORTHO05D007808 5.4e-39 164.5 123 67.5
Os03g0288400 Oryza sativa ssp. japonica HOM05D006193 ORTHO05D007808 5.4e-39 164.5 108 69.4
FAN03G1544 Fragaria x ananassa HOM05D006193 ORTHO05D007808 7.1e-39 164.1 110 70.9
SGA_v2.0_scaffold24G10658 Striga asiatica HOM05D006193 ORTHO05D007808 1.6e-38 162.9 110 71.8
CDE03G0070 Ceratophyllum demersum HOM05D006193 ORTHO05D007808 2.1e-38 162.5 110 66.4
CARHR220160 Cardamine hirsuta HOM05D006193 ORTHO05D007808 2.7e-38 162.2 100 74.0
SGA_v2.0_scaffold250G44987 Striga asiatica HOM05D006193 ORTHO05D007808 3.5e-38 161.8 104 71.2
GSVIVG01016260001 Vitis vinifera HOM05D006193 ORTHO05D007808 3.5e-38 161.8 107 69.2
MELO3C012421.2 Cucumis melo HOM05D006193 ORTHO05D007808 4.6e-38 161.4 158 55.7
Rhsim03G0119300 Rhododendron simsii HOM05D006193 ORTHO05D007808 1.0e-37 160.2 197 48.2
A08p24240 Brassica napus HOM05D006193 ORTHO05D007808 3.0e-37 158.7 101 72.3
Sc20g0001780 Simmondsia chinensis HOM05D006193 ORTHO05D007808 3.0e-37 158.7 129 65.1
BraA08t34379Z Brassica rapa HOM05D006193 ORTHO05D007808 3.9e-37 158.3 111 66.7
Zm00001eb062340 Zea mays HOM05D006193 ORTHO05D007808 1.1e-36 156.8 99 71.7
BcaC01g00219 Brassica carinata HOM05D006193 ORTHO05D007808 7.4e-36 154.1 99 69.7
Sabra10G0173000 Salix brachista HOM05D006193 ORTHO05D007808 2.8e-35 152.1 166 51.8
Aqoxy1G03181 Aquilegia oxysepala HOM05D006193 ORTHO05D007808 6.9e-34 147.5 104 68.3
Psat6g182760 Pisum sativum HOM05D006193 ORTHO05D007808 1.3e-32 143.3 94 73.4
arahy.Tifrunner.gnm1.ann1.D81QGL Arachis hypogaea HOM05D006193 ORTHO05D007808 3.8e-32 141.7 105 66.7
arahy.Tifrunner.gnm1.ann1.N5AHK9 Arachis hypogaea HOM05D006193 ORTHO05D007808 5.5e-31 137.9 105 65.7
Ca_10561_v3 Cicer arietinum L. HOM05D006193 ORTHO05D007808 2.1e-30 136.0 82 79.3
EL10Ac7g18239 Beta vulgaris HOM05D006193 ORTHO05D007808 2.7e-30 135.6 101 67.3
Ah.08g217480 Amaranthus hybridus HOM05D006193 ORTHO05D007808 9.6e-28 127.1 101 62.4
Mapoly0038s0090 Marchantia polymorpha HOM05D006193 ORTHO05D007808 2.8e-27 125.6 106 57.5
AUR62001381 Chenopodium quinoa HOM05D006193 ORTHO05D007808 4.8e-27 124.8 75 76.0
FAN19G2294 Fragaria x ananassa HOM05D006193 ORTHO05D007808 6.2e-27 124.4 82 75.6
MBI07_g30981_MAGBIO Magnolia biondii HOM05D006193 ORTHO05D007808 1.2e-25 120.2 110 56.4
vmacro07063 Vaccinium macrocarpon HOM05D006193 ORTHO05D007808 4.5e-25 118.2 64 87.5
CsaV3_5G036210 Cucumis sativus L. HOM05D006193 ORTHO05D007808 2.7e-22 109.0 62 82.3
Medtr1g094840 Medicago truncatula HOM05D006193 ORTHO05D007808 2.7e-22 109.0 69 72.5
FAN06G3393 Fragaria x ananassa HOM05D006193 ORTHO05D007808 3.0e-21 105.5 63 77.8
AagrBONN_evm.TU.Sc2ySwM_228.264 Anthoceros agrestis HOM05D006193 ORTHO05D007808 3.7e-19 98.6 101 48.5
BolC3t19959H Brassica oleracea HOM05D006193 ORTHO05D007808 8.2e-19 97.4 54 81.5
Lsat_1_v5_gn_2_8120 Lactuca sativa HOM05D006193 ORTHO05D007808 8.2e-19 97.4 103 50.5
EL10Ac7g17093 Beta vulgaris HOM05D006193 ORTHO05D007808 9.0e-18 94.0 64 71.9
SMO232G0066 Selaginella moellendorffii HOM05D006193 ORTHO05D007808 1.5e-17 93.2 90 45.6
Pp3c5_20880 Physcomitrium patens HOM05D006193 ORTHO05D007808 5.0e-16 88.2 100 44.0
SMO241G0021 Selaginella moellendorffii HOM05D006193 ORTHO05D007808 3.2e-15 85.5 90 41.1
Nitab4.5_0005501g0010 Nicotiana tabacum HOM05D006193 ORTHO05D007808 9.4e-15 84.0 109 48.6
Potri.008G038500 Populus trichocarpa HOM05D006193 ORTHO05D007808 7.9e-14 80.9 57 68.4
vmacro07064 Vaccinium macrocarpon HOM05D006193 ORTHO05D007808 1.5e-12 76.6 63 61.9
Medtr1g094845 Medicago truncatula HOM05D006193 ORTHO05D007808 1.6e-06 56.6 40 65.0
CSS0043670 Camellia sinensis var. sinensis HOM05D006193 ORTHO05D007808 2.1e-06 56.2 74 47.3


User provided reference genes

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