Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGR044G2664 Punica granatum HOM05D007415 ORTHO05D009324 8.5e-148 526.9 260 100.0
Gohir.D07G201100 Gossypium hirsutum HOM05D007415 ORTHO05D009324 5.3e-89 331.6 247 63.6
Gorai.001G225800 Gossypium raimondii HOM05D007415 ORTHO05D009324 5.3e-89 331.6 247 63.6
Dinv02951 Davidia involucrata HOM05D007415 ORTHO05D009324 1.2e-88 330.5 249 66.7
Eucgr.K02344 Eucalyptus grandis HOM05D007415 ORTHO05D009324 2.6e-88 329.3 258 62.4
Atru.chr6.3473 Acer truncatum HOM05D007415 ORTHO05D009324 5.8e-88 328.2 264 66.3
Oeu058216.1 Olea europaea HOM05D007415 ORTHO05D009324 8.4e-87 324.3 249 65.9
Manes.12G058800 Manihot esculenta HOM05D007415 ORTHO05D009324 2.7e-85 319.3 262 61.1
Thecc.01G204000 Theobroma cacao HOM05D007415 ORTHO05D009324 4.6e-85 318.5 247 62.3
Ciclev10016323m.g Citrus clementina HOM05D007415 ORTHO05D009324 3.0e-84 315.8 249 63.1
Potri.014G197700 Populus trichocarpa HOM05D007415 ORTHO05D009324 6.7e-84 314.7 267 59.6
CiPaw.07G119000 Carya illinoinensis HOM05D007415 ORTHO05D009324 1.9e-83 313.2 254 63.0
MD11G1318200 Malus domestica HOM05D007415 ORTHO05D009324 7.4e-83 311.2 264 60.6
COL.COLO4_19724 Corchorus olitorius HOM05D007415 ORTHO05D009324 9.6e-83 310.8 250 60.8
Cfa006296 Carpinus fangiana HOM05D007415 ORTHO05D009324 1.6e-82 310.1 254 61.0
Prupe.8G267300 Prunus persica HOM05D007415 ORTHO05D009324 3.7e-82 308.9 262 60.3
Actinidia23816 Actinidia chinensis HOM05D007415 ORTHO05D009324 8.2e-82 307.8 253 59.7
CSS0038002 Camellia sinensis var. sinensis HOM05D007415 ORTHO05D009324 2.0e-80 303.1 264 59.5
MD03G1298900 Malus domestica HOM05D007415 ORTHO05D009324 2.0e-80 303.1 257 60.3
CANSAT11G1932 Cannabis sativa HOM05D007415 ORTHO05D009324 1.7e-79 300.1 266 57.9
Lj1g0001063 Lotus japonicus HOM05D007415 ORTHO05D009324 7.1e-78 294.7 273 57.1
Lsat_1_v5_gn_9_15740 Lactuca sativa HOM05D007415 ORTHO05D009324 1.2e-77 293.9 249 59.0
Migut.D00758 Erythranthe guttata HOM05D007415 ORTHO05D009324 2.1e-77 293.1 247 59.1
Sopen09g012680 Solanum pennellii HOM05D007415 ORTHO05D009324 1.0e-76 290.8 255 57.6
vmacro14670 Vaccinium macrocarpon HOM05D007415 ORTHO05D009324 1.0e-76 290.8 267 56.9
MSTRG.21289 Avicennia marina HOM05D007415 ORTHO05D009324 1.3e-76 290.4 249 61.0
Sc05g0001580 Simmondsia chinensis HOM05D007415 ORTHO05D009324 1.3e-76 290.4 257 58.4
CsaV3_1G007790 Cucumis sativus L. HOM05D007415 ORTHO05D009324 1.1e-75 287.3 269 55.0
Nitab4.5_0011643g0030 Nicotiana tabacum HOM05D007415 ORTHO05D009324 1.5e-75 287.0 251 57.4
Cc01_g15740 Coffea canephora HOM05D007415 ORTHO05D009324 1.9e-75 286.6 258 59.3
arahy.Tifrunner.gnm1.ann1.HL0ERI Arachis hypogaea HOM05D007415 ORTHO05D009324 3.3e-75 285.8 261 57.9
MELO3C002194.2 Cucumis melo HOM05D007415 ORTHO05D009324 4.3e-75 285.4 267 55.1
arahy.Tifrunner.gnm1.ann1.YL0UD8 Arachis hypogaea HOM05D007415 ORTHO05D009324 5.7e-75 285.0 261 57.9
CAN.G15.19 Capsicum annuum HOM05D007415 ORTHO05D009324 7.4e-75 284.6 241 61.0
Solyc09g018950.3 Solanum lycopersicum HOM05D007415 ORTHO05D009324 2.1e-74 283.1 251 57.4
CSS0018954 Camellia sinensis var. sinensis HOM05D007415 ORTHO05D009324 6.3e-74 281.6 230 62.6
HanXRQChr08g0230811 Helianthus annuus HOM05D007415 ORTHO05D009324 1.4e-73 280.4 258 56.2
TAR636G2599 Trochodendron aralioides HOM05D007415 ORTHO05D009324 2.4e-73 279.6 253 56.1
Aa31sc565G30 Aethionema arabicum HOM05D007415 ORTHO05D009324 9.0e-73 277.7 257 54.1
Psat5g001880 Pisum sativum HOM05D007415 ORTHO05D009324 3.4e-72 275.8 249 56.2
QL03p044140 Quercus lobata HOM05D007415 ORTHO05D009324 5.9e-72 275.0 383 41.3
Rhsim01G0246200 Rhododendron simsii HOM05D007415 ORTHO05D009324 7.6e-72 274.6 248 56.5
VMungo1309G2266 Vigna mungo HOM05D007415 ORTHO05D009324 1.9e-70 270.0 264 54.9
ClCG01G014510 Citrullus lanatus HOM05D007415 ORTHO05D009324 3.2e-70 269.2 285 50.9
AT4G12760 Arabidopsis thaliana HOM05D007415 ORTHO05D009324 7.2e-70 268.1 249 56.2
Glyma.04G002800 Glycine max HOM05D007415 ORTHO05D009324 7.2e-70 268.1 250 56.0
Sed0017664 Sechium edule HOM05D007415 ORTHO05D009324 9.3e-70 267.7 262 54.2
Sp7g09150 Schrenkiella parvula HOM05D007415 ORTHO05D009324 1.6e-69 266.9 260 53.5
AL9U11890 Arabidopsis lyrata HOM05D007415 ORTHO05D009324 3.6e-69 265.8 261 52.9
Gohir.A07G194700 Gossypium hirsutum HOM05D007415 ORTHO05D009324 1.0e-68 264.2 209 61.7
SHI10204 Sapria himalayana HOM05D007415 ORTHO05D009324 1.8e-68 263.5 247 55.5
Nn4g24568 Nelumbo nucifera HOM05D007415 ORTHO05D009324 5.1e-68 261.9 255 52.5
Thhalv10026014m.g Eutrema salsugineum HOM05D007415 ORTHO05D009324 6.7e-68 261.5 260 51.9
CARHR218100 Cardamine hirsuta HOM05D007415 ORTHO05D009324 1.1e-67 260.8 248 53.2
Carub.0007s3006 Capsella rubella HOM05D007415 ORTHO05D009324 4.3e-67 258.8 261 52.1
TWI36G0361 Tripterygium wilfordii HOM05D007415 ORTHO05D009324 7.4e-67 258.1 262 53.8
Medtr3g118090 Medicago truncatula HOM05D007415 ORTHO05D009324 1.3e-66 257.3 266 51.5
SalBow6G5534 Salvia bowleyana HOM05D007415 ORTHO05D009324 1.3e-66 257.3 321 48.3
THA.LOC104808823 Tarenaya hassleriana HOM05D007415 ORTHO05D009324 1.7e-66 256.9 248 55.6
Nitab4.5_0010771g0010 Nicotiana tabacum HOM05D007415 ORTHO05D009324 8.2e-66 254.6 251 53.4
BcaB04g17744 Brassica carinata HOM05D007415 ORTHO05D009324 1.1e-65 254.2 260 50.8
Duzib133G1418 Durio zibethinus HOM05D007415 ORTHO05D009324 3.4e-64 249.2 247 53.0
PSO675G4429 Papaver somniferum HOM05D007415 ORTHO05D009324 5.9e-64 248.4 254 52.0
Peaxi162Scf00424g00066 Petunia axillaris HOM05D007415 ORTHO05D009324 1.7e-63 246.9 220 57.3
BcaC07g37433 Brassica carinata HOM05D007415 ORTHO05D009324 2.2e-63 246.5 247 50.6
C08p09070 Brassica napus HOM05D007415 ORTHO05D009324 2.2e-63 246.5 247 50.6
BolC8t47754H Brassica oleracea HOM05D007415 ORTHO05D009324 2.2e-63 246.5 247 50.6
BraA08t32753Z Brassica rapa HOM05D007415 ORTHO05D009324 3.8e-63 245.7 245 50.2
unitig_61.g26009 Utricularia gibba HOM05D007415 ORTHO05D009324 4.2e-62 242.3 251 50.6
DCAR_012712 Daucus carota HOM05D006570 ORTHO05D008193 9.4e-62 241.1 258 50.0
Cpa.g.sc8.12 Carica papaya HOM05D007415 ORTHO05D009324 1.6e-61 240.4 209 58.4
A08p07370 Brassica napus HOM05D007415 ORTHO05D009324 2.3e-60 236.5 272 46.0
ECA247G1801 Erigeron canadensis HOM05D007415 ORTHO05D009324 1.5e-59 233.8 255 50.6
Hund02818 Selenicereus undatus HOM05D007415 ORTHO05D009324 1.4e-57 227.3 238 56.7
Lalb_Chr11g0061191 Lupinus albus HOM05D007415 ORTHO05D009324 3.1e-57 226.1 181 60.8
Aqoxy4G00006 Aquilegia oxysepala HOM05D007415 ORTHO05D009324 6.9e-57 224.9 258 48.1
Sabra14G0132700 Salix brachista HOM05D007415 ORTHO05D009324 9.1e-57 224.6 335 43.0
EL10Ac5g10567 Beta vulgaris HOM05D007415 ORTHO05D009324 1.5e-56 223.8 205 60.5
MBI10_g35389_MAGBIO Magnolia biondii HOM05D007415 ORTHO05D009324 4.5e-56 222.2 237 50.2
GSVIVG01038257001 Vitis vinifera HOM05D007415 ORTHO05D009324 5.9e-56 221.9 235 46.0
Lj1C108T7 Lonicera japonica HOM05D007415 ORTHO05D009324 4.7e-53 212.2 177 59.3
Duzib138G0016 Durio zibethinus HOM05D007415 ORTHO05D009324 1.5e-51 207.2 245 46.9
Os05g0417300 Oryza sativa ssp. japonica HOM05D007415 ORTHO05D009324 3.3e-51 206.1 254 43.3
Glyma.06G002800 Glycine max HOM05D007415 ORTHO05D009324 2.4e-49 199.9 197 53.3
AUR62028622 Chenopodium quinoa HOM05D007415 ORTHO05D009324 3.1e-49 199.5 254 46.1
CDE04G2941 Ceratophyllum demersum HOM05D007415 ORTHO05D009324 4.1e-49 199.1 235 48.9
Phvul.009G118400 Phaseolus vulgaris HOM05D007415 ORTHO05D009324 9.1e-49 198.0 256 47.7
AUR62008047 Chenopodium quinoa HOM05D007415 ORTHO05D009324 1.2e-48 197.6 254 46.5
PSO732G0601 Papaver somniferum HOM05D007415 ORTHO05D009324 3.8e-47 192.6 270 44.1
PGSC0003DMG400020290 Solanum tuberosum HOM05D007415 ORTHO05D009324 3.7e-42 176.0 139 61.9
Ca_15292_v3 Cicer arietinum L. HOM05D007415 ORTHO05D009324 1.4e-36 157.5 161 50.9
ATR0743G053 Amborella trichopoda HOM05D007415 ORTHO05D009324 7.5e-35 151.8 240 37.5
TPR.G38565 Trifolium pratense HOM05D007415 ORTHO05D009324 1.8e-33 147.1 245 39.6
HPP92_001921 Vanilla planifolia HOM05D007415 ORTHO05D009324 4.7e-29 132.5 158 46.8
Haze_04514 Corylus avellana HOM05D007415 ORTHO05D009324 1.4e-28 131.0 145 51.0
Mapoly0134s0003 Marchantia polymorpha HOM05D007415 ORTHO05D009324 1.6e-24 117.5 243 32.5
Pp3c1_28310 Physcomitrium patens HOM05D007415 ORTHO05D009324 2.3e-23 113.6 198 32.3
Ah.11g050670 Amaranthus hybridus HOM05D007415 ORTHO05D009324 2.5e-22 110.2 215 36.3
SalBow2G2324 Salvia bowleyana HOM05D007415 ORTHO05D009324 2.3e-20 103.6 264 33.0
DCAR_017283 Daucus carota HOM05D007415 ORTHO05D009324 2.9e-18 96.7 133 41.4
SMO356G0522 Selaginella moellendorffii HOM05D007415 ORTHO05D009324 1.1e-17 94.7 241 29.9
AagrBONN_evm.TU.Sc2ySwM_362.2902 Anthoceros agrestis HOM05D007415 ORTHO05D009324 1.6e-16 90.9 168 32.7
Zm00001eb288240 Zea mays HOM05D007415 ORTHO05D009324 9.5e-14 81.6 114 42.1
PGSC0003DMG400007530 Solanum tuberosum HOM05D007415 ORTHO05D009324 1.2e-13 81.3 78 52.6
TPR.G6328 Trifolium pratense HOM05D000001 ORTHO05D009753 3.9e-07 59.7 37 70.3


User provided reference genes

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