Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGR044G2653 Punica granatum HOM05D004681 ORTHO05D005541 2.2e-177 625.5 319 100.0
Eucgr.C00132 Eucalyptus grandis HOM05D004681 ORTHO05D005541 2.2e-121 439.5 328 69.5
GSVIVG01010902001 Vitis vinifera HOM05D004681 ORTHO05D005541 6.0e-119 431.4 322 66.1
Solyc07g009320.3 Solanum lycopersicum HOM05D004681 ORTHO05D005541 7.8e-119 431.0 327 66.4
Sopen07g005070 Solanum pennellii HOM05D004681 ORTHO05D005541 1.3e-118 430.3 327 66.4
PGSC0003DMG400008514 Solanum tuberosum HOM05D004681 ORTHO05D005541 3.9e-118 428.7 327 66.1
Actinidia06358 Actinidia chinensis HOM05D004681 ORTHO05D005541 2.1e-116 422.9 328 67.1
Dinv25404 Davidia involucrata HOM05D004681 ORTHO05D005541 2.8e-116 422.5 328 67.1
Actinidia22469 Actinidia chinensis HOM05D004681 ORTHO05D005541 4.8e-116 421.8 319 66.8
Thecc.09G181200 Theobroma cacao HOM05D004681 ORTHO05D005541 1.1e-115 420.6 325 66.5
Nitab4.5_0010281g0010 Nicotiana tabacum HOM05D004681 ORTHO05D005541 1.2e-114 417.2 320 65.9
Gohir.D08G028500 Gossypium hirsutum HOM05D004681 ORTHO05D005541 9.9e-114 414.1 323 64.7
Peaxi162Scf00324g00718 Petunia axillaris HOM05D004681 ORTHO05D005541 1.7e-113 413.3 327 62.7
CAN.G1668.9 Capsicum annuum HOM05D004681 ORTHO05D005541 2.2e-113 412.9 326 64.1
Rhsim13G0200500 Rhododendron simsii HOM05D004681 ORTHO05D005541 2.9e-113 412.5 375 58.9
SalBow7G3904 Salvia bowleyana HOM05D004681 ORTHO05D005541 3.8e-113 412.1 325 64.3
Gohir.A08G017900 Gossypium hirsutum HOM05D004681 ORTHO05D005541 4.9e-113 411.8 323 64.7
Cfa013431 Carpinus fangiana HOM05D004681 ORTHO05D005541 6.4e-113 411.4 329 64.4
CiPaw.07G195100 Carya illinoinensis HOM05D004681 ORTHO05D005541 1.4e-112 410.2 326 63.8
QL12p032381 Quercus lobata HOM05D004681 ORTHO05D005541 5.4e-112 408.3 324 64.5
Manes.04G060300 Manihot esculenta HOM05D004681 ORTHO05D005541 2.1e-111 406.4 328 63.1
Cpa.g.sc95.29 Carica papaya HOM05D004681 ORTHO05D005541 2.7e-111 406.0 324 62.7
Gorai.004G025600 Gossypium raimondii HOM05D004681 ORTHO05D005541 3.5e-111 405.6 334 62.6
HanXRQChr09g0266261 Helianthus annuus HOM05D004681 ORTHO05D005541 1.0e-110 404.1 322 64.3
Duzib168G0714 Durio zibethinus HOM05D004681 ORTHO05D005541 1.7e-110 403.3 321 65.1
Manes.14G161401 Manihot esculenta HOM05D004681 ORTHO05D005541 1.7e-110 403.3 328 63.1
MSTRG.10452 Avicennia marina HOM05D004681 ORTHO05D005541 3.0e-110 402.5 323 61.6
Oeu000976.1 Olea europaea HOM05D004681 ORTHO05D005541 5.1e-110 401.7 320 64.1
Duzib170G0205 Durio zibethinus HOM05D004681 ORTHO05D005541 6.6e-110 401.4 330 62.7
SalBow7G0268 Salvia bowleyana HOM05D004681 ORTHO05D005541 1.3e-108 397.1 343 59.5
CiPaw.08G033800 Carya illinoinensis HOM05D004681 ORTHO05D005541 3.6e-108 395.6 317 64.4
Atru.chr7.819 Acer truncatum HOM05D004681 ORTHO05D005541 1.1e-107 394.0 319 63.3
Dinv26443 Davidia involucrata HOM05D004681 ORTHO05D005541 1.4e-107 393.7 299 66.6
Sc14g0001370 Simmondsia chinensis HOM05D004681 ORTHO05D005541 1.8e-107 393.3 324 62.3
Prupe.1G079200 Prunus persica HOM05D004681 ORTHO05D005541 6.9e-107 391.3 311 62.4
TWI63G0533 Tripterygium wilfordii HOM05D004681 ORTHO05D005541 9.0e-107 391.0 326 62.3
Lsat_1_v5_gn_4_183080 Lactuca sativa HOM05D004681 ORTHO05D005541 1.2e-106 390.6 320 64.1
RcHm_v2.0_Chr4g0400191 Rosa chinensis HOM05D004681 ORTHO05D005541 3.4e-106 389.0 322 61.2
Cc06_g22600 Coffea canephora HOM05D004681 ORTHO05D005541 4.9e-105 385.2 328 61.0
SGA_v2.0_scaffold41G15864 Striga asiatica HOM05D004681 ORTHO05D005541 5.4e-104 381.7 320 62.2
Ciclev10008916m.g Citrus clementina HOM05D004681 ORTHO05D005541 1.2e-103 380.6 323 61.6
CANSAT11G1051 Cannabis sativa HOM05D004681 ORTHO05D005541 2.1e-103 379.8 318 62.9
ClCG06G013520 Citrullus lanatus HOM05D004681 ORTHO05D005541 2.7e-103 379.4 322 61.2
PSO079G0045 Papaver somniferum HOM05D004681 ORTHO05D005541 1.8e-102 376.7 332 60.8
Aqoxy7G02735 Aquilegia oxysepala HOM05D004681 ORTHO05D005541 3.3e-101 372.5 325 58.8
BcaB07g31622 Brassica carinata HOM05D004681 ORTHO05D005541 3.3e-101 372.5 315 59.4
Nitab4.5_0000074g0040 Nicotiana tabacum HOM05D004681 ORTHO05D005541 4.3e-101 372.1 291 64.6
MELO3C017439.2 Cucumis melo HOM05D004681 ORTHO05D005541 5.6e-101 371.7 326 59.2
AL3G52840 Arabidopsis lyrata HOM05D004681 ORTHO05D005541 7.4e-101 371.3 316 59.5
CSS0025965 Camellia sinensis var. sinensis HOM05D004681 ORTHO05D005541 7.4e-101 371.3 311 62.4
PSO423G0181 Papaver somniferum HOM05D004681 ORTHO05D005541 9.6e-101 370.9 333 59.8
BcaB03g16704 Brassica carinata HOM05D004681 ORTHO05D005541 1.3e-100 370.5 315 60.6
Thhalv10022785m.g Eutrema salsugineum HOM05D004681 ORTHO05D005541 1.3e-100 370.5 315 59.4
Hund09046 Selenicereus undatus HOM05D004681 ORTHO05D005541 4.8e-100 368.6 334 57.2
A09p12190 Brassica napus HOM05D004681 ORTHO05D005541 1.1e-99 367.5 315 59.0
Sp3g32480 Schrenkiella parvula HOM05D004681 ORTHO05D005541 1.4e-99 367.1 315 59.0
Potri.006G077100 Populus trichocarpa HOM05D004681 ORTHO05D005541 3.1e-99 365.9 326 58.3
BraA09t36865Z Brassica rapa HOM05D004681 ORTHO05D005541 4.0e-99 365.5 315 59.0
Carub.0003s3332 Capsella rubella HOM05D004681 ORTHO05D005541 4.0e-99 365.5 316 58.9
BcaC04g22869 Brassica carinata HOM05D004681 ORTHO05D005541 5.3e-99 365.2 315 58.4
FAN22G1928 Fragaria x ananassa HOM05D004681 ORTHO05D005541 6.9e-99 364.8 325 57.2
HanXRQChr10g0297571 Helianthus annuus HOM05D004681 ORTHO05D005541 6.9e-99 364.8 363 55.1
CARHR109600 Cardamine hirsuta HOM05D004681 ORTHO05D005541 7.6e-98 361.3 316 58.2
Ah.09g230170 Amaranthus hybridus HOM05D004681 ORTHO05D005541 1.7e-97 360.1 325 59.1
C09p14440 Brassica napus HOM05D004681 ORTHO05D005541 1.7e-97 360.1 315 58.1
ECA232G3088 Erigeron canadensis HOM05D004681 ORTHO05D005541 1.7e-97 360.1 325 60.9
BolC9t54347H Brassica oleracea HOM05D004681 ORTHO05D005541 2.2e-97 359.8 316 58.2
FvH4_4g07590 Fragaria vesca HOM05D004681 ORTHO05D005541 3.8e-97 359.0 325 56.6
MBI13_g31546_MAGBIO Magnolia biondii HOM05D004681 ORTHO05D005541 4.9e-97 358.6 329 58.7
FAN12G2798 Fragaria x ananassa HOM05D004681 ORTHO05D005541 1.1e-96 357.5 325 56.3
Aa31LG8G16140 Aethionema arabicum HOM05D004681 ORTHO05D005541 1.4e-96 357.1 315 59.0
MD13G1245600 Malus domestica HOM05D004681 ORTHO05D005541 1.4e-96 357.1 314 56.7
BcaC06g36518 Brassica carinata HOM05D004681 ORTHO05D005541 2.5e-96 356.3 315 58.7
AUR62033246 Chenopodium quinoa HOM05D004681 ORTHO05D005541 3.2e-96 355.9 328 57.3
RcHm_v2.0_Chr7g0191541 Rosa chinensis HOM05D004681 ORTHO05D005541 4.2e-96 355.5 322 55.9
Potri.018G145508 Populus trichocarpa HOM05D004681 ORTHO05D005541 5.5e-96 355.1 289 60.6
AT2G19080 Arabidopsis thaliana HOM05D004681 ORTHO05D005541 7.1e-96 354.8 316 57.6
CSS0001946 Camellia sinensis var. sinensis HOM05D004681 ORTHO05D005541 7.1e-96 354.8 232 71.6
Migut.L01897 Erythranthe guttata HOM05D004681 ORTHO05D005541 7.1e-96 354.8 323 58.2
CsaV3_1G031790 Cucumis sativus L. HOM05D004681 ORTHO05D005541 2.1e-95 353.2 326 58.0
THA.LOC104819968 Tarenaya hassleriana HOM05D004681 ORTHO05D005541 4.6e-95 352.1 316 57.9
EL10Ac8g18317 Beta vulgaris HOM05D004681 ORTHO05D005541 1.0e-94 350.9 333 55.3
SGA_v2.0_scaffold21G09637 Striga asiatica HOM05D004681 ORTHO05D005541 1.8e-94 350.1 319 58.6
Sabra06G0058400 Salix brachista HOM05D004681 ORTHO05D005541 1.9e-93 346.7 350 53.1
Lj7A127G13 Lonicera japonica HOM05D004681 ORTHO05D005541 5.7e-93 345.1 277 66.4
FAN17G0253 Fragaria x ananassa HOM05D004681 ORTHO05D005541 1.8e-91 340.1 325 55.4
COL.COLO4_29315 Corchorus olitorius HOM05D004681 ORTHO05D005541 9.0e-91 337.8 274 63.5
unitig_578.g16069 Utricularia gibba HOM05D004681 ORTHO05D005541 2.0e-90 336.7 318 55.7
C07p03410 Brassica napus HOM05D004681 ORTHO05D005541 1.3e-89 334.0 315 55.9
BolC7t40740H Brassica oleracea HOM05D004681 ORTHO05D005541 1.3e-89 334.0 315 55.9
VMungo1215G0406 Vigna mungo HOM05D004681 ORTHO05D005541 1.3e-89 334.0 318 54.4
arahy.Tifrunner.gnm1.ann1.L4KBSE Arachis hypogaea HOM05D004681 ORTHO05D005541 2.9e-89 332.8 329 53.8
A07p01650 Brassica napus HOM05D004681 ORTHO05D005541 5.0e-89 332.0 305 57.0
BraA07t27967Z Brassica rapa HOM05D004681 ORTHO05D005541 5.0e-89 332.0 305 57.0
Phvul.003G142900 Phaseolus vulgaris HOM05D004681 ORTHO05D005541 1.0e-86 324.3 318 53.8
arahy.Tifrunner.gnm1.ann1.K04ERL Arachis hypogaea HOM05D004681 ORTHO05D005541 1.3e-86 323.9 329 53.2
Glyma.15G164000 Glycine max HOM05D004681 ORTHO05D005541 1.8e-86 323.6 314 53.5
HPP92_004723 Vanilla planifolia HOM05D004681 ORTHO05D005541 2.3e-86 323.2 330 54.5
ATR0626G278 Amborella trichopoda HOM05D004681 ORTHO05D005541 1.5e-85 320.5 330 53.0
Sed0004411 Sechium edule HOM05D004681 ORTHO05D005541 3.3e-85 319.3 272 58.5
Glyma.09G057900 Glycine max HOM05D004681 ORTHO05D005541 5.7e-85 318.5 325 52.3
Glyma.13G099400 Glycine max HOM05D004681 ORTHO05D005541 5.7e-85 318.5 318 54.1
Lalb_Chr15g0084091 Lupinus albus HOM05D004681 ORTHO05D005541 6.3e-84 315.1 329 52.0
Glyma.17G060700 Glycine max HOM05D004681 ORTHO05D005541 1.4e-83 313.9 318 53.5
VMungo1309G2393 Vigna mungo HOM05D004681 ORTHO05D005541 3.4e-82 309.3 323 51.4
Medtr4g127630 Medicago truncatula HOM05D004681 ORTHO05D005541 7.7e-82 308.1 311 53.4
Phvul.009G237800 Phaseolus vulgaris HOM05D004681 ORTHO05D005541 6.5e-81 305.1 331 50.5
arahy.Tifrunner.gnm1.ann1.KM341F Arachis hypogaea HOM05D004681 ORTHO05D005541 8.5e-81 304.7 332 50.9
Nn2g12745 Nelumbo nucifera HOM05D004681 ORTHO05D005541 1.1e-80 304.3 323 55.7
Os06g0168000 Oryza sativa ssp. japonica HOM05D004681 ORTHO05D005541 1.1e-80 304.3 329 51.1
Medtr2g036910 Medicago truncatula HOM05D004681 ORTHO05D005541 1.4e-80 303.9 324 50.9
Psat0s736g0040 Pisum sativum HOM05D004681 ORTHO05D005541 2.1e-79 300.1 312 51.9
Lj6g0005497 Lotus japonicus HOM05D004681 ORTHO05D005541 4.6e-79 298.9 325 50.5
TPR.G5388 Trifolium pratense HOM05D004681 ORTHO05D005541 7.9e-79 298.1 312 51.0
Lj4g0016729 Lotus japonicus HOM05D004681 ORTHO05D005541 1.8e-78 297.0 320 49.1
arahy.Tifrunner.gnm1.ann1.LX7F61 Arachis hypogaea HOM05D004681 ORTHO05D005541 2.3e-78 296.6 332 49.4
Ca_21245_v3 Cicer arietinum L. HOM05D004410 ORTHO05D006134 5.7e-77 292.0 318 50.0
Lalb_Chr12g0199511 Lupinus albus HOM05D004681 ORTHO05D005541 1.3e-76 290.8 313 51.4
AUR62021331 Chenopodium quinoa HOM05D004681 ORTHO05D005541 1.1e-75 287.7 328 49.7
Ca_02042_v3 Cicer arietinum L. HOM05D004681 ORTHO05D005541 1.8e-75 287.0 330 48.2
HanXRQChr04g0105751 Helianthus annuus HOM05D004681 ORTHO05D005541 5.0e-73 278.9 183 70.5
TPR.G9028 Trifolium pratense HOM05D004681 ORTHO05D005541 9.4e-72 274.6 331 47.4
CDE06G1906 Ceratophyllum demersum HOM05D004681 ORTHO05D005541 3.6e-71 272.7 325 47.1
DCAR_019823 Daucus carota HOM05D004410 ORTHO05D006134 1.4e-70 270.8 332 48.5
SHI02877 Sapria himalayana HOM05D004681 ORTHO05D005541 8.8e-70 268.1 474 37.6
Potri.018G147625 Populus trichocarpa HOM05D004681 ORTHO05D005541 1.1e-67 261.2 323 46.7
TAR636G1425 Trochodendron aralioides HOM05D004681 ORTHO05D005541 3.8e-65 252.7 223 61.9
vmacro23062 Vaccinium macrocarpon HOM05D004681 ORTHO05D005541 3.8e-65 252.7 278 49.6
Pp3c4_10660 Physcomitrium patens HOM05D004681 ORTHO05D005541 1.4e-62 244.2 322 41.9
Pp3c12_12510 Physcomitrium patens HOM05D004681 ORTHO05D005541 9.7e-61 238.0 313 41.9
Psat1g145840 Pisum sativum HOM05D004681 ORTHO05D005541 2.4e-59 233.4 211 55.5
Haze_21984 Corylus avellana HOM05D004681 ORTHO05D005541 8.8e-54 214.9 209 52.6
Mapoly0001s0301 Marchantia polymorpha HOM05D004681 ORTHO05D005541 1.3e-52 211.1 315 40.0
CAN.G609.4 Capsicum annuum HOM05D004681 ORTHO05D005541 3.7e-52 209.5 141 68.8
RcHm_v2.0_Chr7g0191431 Rosa chinensis HOM05D004681 ORTHO05D005541 2.0e-50 203.8 296 42.6
Zm00001eb375500 Zea mays HOM05D004681 ORTHO05D005541 2.7e-50 203.4 190 54.2
AagrBONN_evm.TU.Sc2ySwM_228.4196 Anthoceros agrestis HOM05D004681 ORTHO05D005541 3.8e-49 199.5 316 37.0
SGA_v2.0_scaffold41G15854 Striga asiatica HOM05D004681 ORTHO05D005541 1.5e-48 197.6 266 46.6
SMO358G0154 Selaginella moellendorffii HOM05D004681 ORTHO05D005541 2.8e-44 183.3 322 36.3
Potri.001G065336 Populus trichocarpa HOM05D004681 ORTHO05D005541 1.3e-36 157.9 112 65.2
Ca_02046_v3 Cicer arietinum L. HOM05D004681 ORTHO05D005541 1.8e-35 154.1 228 42.1
CAN.G497.61 Capsicum annuum HOM05D004681 ORTHO05D005541 6.2e-31 139.0 115 59.1
Potri.018G145080 Populus trichocarpa HOM05D004681 ORTHO05D005541 4.9e-28 129.4 162 50.0
Potri.001G064609 Populus trichocarpa HOM05D004681 ORTHO05D005541 7.3e-24 115.5 79 64.6
CAN.G266.1 Capsicum annuum HOM05D004681 ORTHO05D005541 6.2e-23 112.5 157 43.9
Haze_21988 Corylus avellana HOM05D004681 ORTHO05D005541 1.4e-22 111.3 134 53.0
CBR_g39348 Chara braunii HOM05D000019 ORTHO05D000002 2.0e-21 107.5 180 34.4
SMO367G0296 Selaginella moellendorffii HOM05D004681 ORTHO05D005541 1.3e-20 104.8 242 33.1
HanXRQChr04g0105741 Helianthus annuus HOM05D004681 ORTHO05D005541 2.4e-19 100.5 115 53.0
Haze_21985 Corylus avellana HOM05D004681 ORTHO05D005541 1.2e-15 88.2 115 47.8
QL05p087685 Quercus lobata HOM05D004681 ORTHO05D005541 1.6e-15 87.8 205 32.2
vmacro04071 Vaccinium macrocarpon HOM05D004681 ORTHO05D005541 1.1e-14 85.1 116 50.9
Potri.001G065000 Populus trichocarpa HOM05D004681 ORTHO05D005541 1.2e-13 81.6 116 46.6
SMO367G1182 Selaginella moellendorffii HOM05D004681 ORTHO05D005541 2.2e-12 77.4 173 30.6
SMO230G0066 Selaginella moellendorffii HOM05D004681 ORTHO05D005541 1.3e-09 68.2 229 29.7
AUR62034598 Chenopodium quinoa HOM05D022644 ORTHO05D003557 1.7e-09 67.8 52 55.8
PRCOL_00000454 Prasinoderma coloniale HOM05D004681 ORTHO05D005541 3.0e-09 67.0 311 25.1
MELO3C029108.2 Cucumis melo HOM05D004681 ORTHO05D005541 1.9e-08 64.3 46 60.9


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