Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGR044G2601 Punica granatum HOM05D006769 ORTHO05D008522 2.7e-219 765.0 374 100.0
MD05G1163100 Malus domestica HOM05D006769 ORTHO05D008522 5.8e-121 438.3 384 61.7
FvH4_2g17880 Fragaria vesca HOM05D006769 ORTHO05D008522 1.3e-120 437.2 380 61.3
Prupe.8G191400 Prunus persica HOM05D006769 ORTHO05D008522 6.4e-120 434.9 379 62.5
FAN15G1712 Fragaria x ananassa HOM05D006769 ORTHO05D008522 8.3e-120 434.5 380 60.8
FAN24G2350 Fragaria x ananassa HOM05D006769 ORTHO05D008522 7.0e-119 431.4 380 60.8
Gohir.D07G166800 Gossypium hirsutum HOM05D006769 ORTHO05D008522 1.1e-114 417.5 386 58.3
Manes.12G053000 Manihot esculenta HOM05D006769 ORTHO05D008522 1.1e-114 417.5 386 61.7
Potri.002G250400 Populus trichocarpa HOM05D006769 ORTHO05D008522 1.1e-114 417.5 386 59.6
CANSAT01G2880 Cannabis sativa HOM05D006769 ORTHO05D008522 2.3e-114 416.4 381 59.3
Lalb_Chr03g0041161 Lupinus albus HOM05D006769 ORTHO05D008522 6.8e-114 414.8 372 60.8
Eucgr.K02091 Eucalyptus grandis HOM05D006769 ORTHO05D008522 1.2e-113 414.1 273 73.3
CsaV3_7G026790 Cucumis sativus L. HOM05D006769 ORTHO05D008522 1.5e-113 413.7 375 58.9
Phvul.008G137400 Phaseolus vulgaris HOM05D006769 ORTHO05D008522 2.6e-113 412.9 374 60.7
Gorai.N003700 Gossypium raimondii HOM05D006769 ORTHO05D008522 3.4e-113 412.5 386 58.0
Nn1g08265 Nelumbo nucifera HOM05D006769 ORTHO05D008522 3.4e-113 412.5 380 57.9
Cfa010337 Carpinus fangiana HOM05D006769 ORTHO05D008522 4.4e-113 412.1 382 58.6
Lj1g0001413 Lotus japonicus HOM05D006769 ORTHO05D008522 5.8e-113 411.8 376 58.2
ClCG09G008260 Citrullus lanatus HOM05D006769 ORTHO05D008522 7.5e-113 411.4 375 58.7
FAN27G3257 Fragaria x ananassa HOM05D006769 ORTHO05D008522 9.8e-113 411.0 353 60.6
CiPaw.13G054700 Carya illinoinensis HOM05D006769 ORTHO05D008522 1.3e-112 410.6 375 59.7
Thecc.01G211800 Theobroma cacao HOM05D006769 ORTHO05D008522 2.9e-112 409.5 379 58.0
Medtr7g052250 Medicago truncatula HOM05D006769 ORTHO05D008522 3.7e-112 409.1 373 59.8
RcHm_v2.0_Chr6g0283131 Rosa chinensis HOM05D006769 ORTHO05D008522 4.1e-111 405.6 303 67.0
TWI18G0992 Tripterygium wilfordii HOM05D006769 ORTHO05D008522 4.1e-111 405.6 365 58.9
arahy.Tifrunner.gnm1.ann1.ADK8RR Arachis hypogaea HOM05D006769 ORTHO05D008522 5.4e-111 405.2 372 57.5
Hma1.2p1_0161F.1_g071350 Hydrangea macrophylla HOM05D006769 ORTHO05D008522 5.4e-111 405.2 403 55.6
Glyma.08G344800 Glycine max HOM05D006769 ORTHO05D008522 1.2e-110 404.1 394 55.8
arahy.Tifrunner.gnm1.ann1.N7FX8W Arachis hypogaea HOM05D006769 ORTHO05D008522 2.7e-110 402.9 374 58.3
Psat3g151240 Pisum sativum HOM05D006769 ORTHO05D008522 4.6e-110 402.1 382 58.1
CAN.G188.2 Capsicum annuum HOM05D006769 ORTHO05D008522 6.0e-110 401.7 432 52.1
Ca_07395_v3 Cicer arietinum L. HOM05D006769 ORTHO05D008522 1.0e-109 401.0 376 58.5
Cc01_g16210 Coffea canephora HOM05D006769 ORTHO05D008522 3.9e-109 399.1 418 54.3
ECA248G0008 Erigeron canadensis HOM05D006769 ORTHO05D008522 6.6e-109 398.3 380 58.2
Dinv12798 Davidia involucrata HOM05D006769 ORTHO05D008522 8.6e-109 397.9 423 53.0
PSO170G1917 Papaver somniferum HOM05D006769 ORTHO05D008522 3.3e-108 396.0 387 57.4
Duzib138G0404 Durio zibethinus HOM05D006769 ORTHO05D008522 7.3e-108 394.8 364 59.3
HanXRQChr01g0007211 Helianthus annuus HOM05D006769 ORTHO05D008522 1.2e-107 394.0 375 56.8
QL09p046131 Quercus lobata HOM05D006769 ORTHO05D008522 3.6e-107 392.5 457 50.1
TPR.G26832 Trifolium pratense HOM05D006769 ORTHO05D008522 4.7e-107 392.1 375 57.9
Actinidia30020 Actinidia chinensis HOM05D006769 ORTHO05D008522 1.4e-106 390.6 319 64.6
THA.LOC104819455 Tarenaya hassleriana HOM05D006769 ORTHO05D008522 2.3e-106 389.8 292 67.5
MSTRG.12754 Avicennia marina HOM05D006769 ORTHO05D008522 5.2e-106 388.7 407 52.6
GSVIVG01006251001 Vitis vinifera HOM05D006769 ORTHO05D008522 5.2e-106 388.7 424 53.3
AUR62008129 Chenopodium quinoa HOM05D006769 ORTHO05D008522 5.8e-105 385.2 381 55.6
Sc05g0001770 Simmondsia chinensis HOM05D006769 ORTHO05D008522 2.9e-104 382.9 380 57.9
Nitab4.5_0008509g0020 Nicotiana tabacum HOM05D006769 ORTHO05D008522 1.1e-103 380.9 393 53.9
Atru.chr6.1512 Acer truncatum HOM05D006769 ORTHO05D008522 1.9e-103 380.2 416 52.9
AUR62028711 Chenopodium quinoa HOM05D006769 ORTHO05D008522 1.9e-103 380.2 383 56.1
Migut.N00662 Erythranthe guttata HOM05D006769 ORTHO05D008522 5.4e-103 378.6 397 55.4
DCAR_004766 Daucus carota HOM05D006769 ORTHO05D008522 1.2e-102 377.5 384 53.4
Ah.11g051100 Amaranthus hybridus HOM05D006769 ORTHO05D008522 2.7e-102 376.3 387 55.3
Lj2A1118G65 Lonicera japonica HOM05D006769 ORTHO05D008522 3.5e-102 375.9 472 48.7
Aqoxy5G00037 Aquilegia oxysepala HOM05D006769 ORTHO05D008522 1.0e-101 374.4 386 55.4
Hund02792 Selenicereus undatus HOM05D006769 ORTHO05D008522 9.5e-100 367.9 396 52.5
BcaC07g40819 Brassica carinata HOM05D006769 ORTHO05D008522 2.1e-99 366.7 295 63.4
C08p38120 Brassica napus HOM05D006769 ORTHO05D008522 2.1e-99 366.7 295 63.4
CARHR294500 Cardamine hirsuta HOM05D006769 ORTHO05D008522 2.1e-99 366.7 329 59.0
Oeu003634.1 Olea europaea HOM05D006769 ORTHO05D008522 4.7e-99 365.5 459 46.8
EL10Ac5g10636 Beta vulgaris HOM05D006769 ORTHO05D008522 8.1e-99 364.8 382 53.9
Thhalv10003450m.g Eutrema salsugineum HOM05D006769 ORTHO05D008522 1.4e-98 364.0 364 53.3
ATR0609G088 Amborella trichopoda HOM05D006769 ORTHO05D008522 3.1e-98 362.8 389 54.0
AT2G26470 Arabidopsis thaliana HOM05D006769 ORTHO05D008522 4.0e-98 362.5 373 52.3
BolC8t51387H Brassica oleracea HOM05D006769 ORTHO05D008522 5.2e-98 362.1 300 62.7
BcaB08g35324 Brassica carinata HOM05D006769 ORTHO05D008522 1.5e-97 360.5 367 53.7
Carub.0004s0653 Capsella rubella HOM05D006769 ORTHO05D008522 1.5e-97 360.5 386 52.1
Sp6g10380 Schrenkiella parvula HOM05D006769 ORTHO05D008522 4.4e-97 359.0 366 53.6
Aa31LG5G9400 Aethionema arabicum HOM05D006769 ORTHO05D008522 5.8e-97 358.6 368 52.7
SHI10304 Sapria himalayana HOM05D006769 ORTHO05D008522 5.8e-97 358.6 276 65.9
Carub.0004s0639 Capsella rubella HOM05D006769 ORTHO05D008522 1.3e-96 357.5 375 53.9
Rhsim13G0052300 Rhododendron simsii HOM05D006769 ORTHO05D008522 2.9e-96 356.3 366 54.6
BraA09t40927Z Brassica rapa HOM05D006769 ORTHO05D008522 3.8e-96 355.9 402 51.2
A09p55190 Brassica napus HOM05D006769 ORTHO05D008522 8.4e-96 354.8 402 51.2
SalBow3G4668 Salvia bowleyana HOM05D006769 ORTHO05D008522 1.9e-95 353.6 394 53.0
TAR365G1082 Trochodendron aralioides HOM05D006769 ORTHO05D008522 2.1e-94 350.1 381 52.2
AL4G19290 Arabidopsis lyrata HOM05D006769 ORTHO05D008522 1.3e-93 347.4 367 50.4
unitig_37.g12548 Utricularia gibba HOM05D006769 ORTHO05D008522 2.5e-92 343.2 377 51.7
vmacro21305 Vaccinium macrocarpon HOM05D006769 ORTHO05D008522 6.9e-90 335.1 405 49.1
SEGI_34173 Sequoiadendron giganteum HOM05D006769 ORTHO05D008522 4.4e-89 332.4 396 48.5
SMO241G0010 Selaginella moellendorffii HOM05D006769 ORTHO05D008522 7.3e-84 315.1 291 55.7
Lsat_1_v5_gn_5_178440 Lactuca sativa HOM05D006769 ORTHO05D008522 6.9e-82 308.5 371 47.4
AagrBONN_evm.TU.Sc2ySwM_344.907 Anthoceros agrestis HOM05D006769 ORTHO05D008522 9.0e-82 308.1 395 45.8
HanXRQChr01g0007221 Helianthus annuus HOM05D006769 ORTHO05D008522 7.6e-81 305.1 428 44.2
VMungo1383G2812 Vigna mungo HOM05D006769 ORTHO05D008522 3.2e-79 299.7 289 59.5
Gohir.A07G159600 Gossypium hirsutum HOM05D006769 ORTHO05D008522 7.1e-79 298.5 294 58.2
HPP92_009961 Vanilla planifolia HOM05D006769 ORTHO05D008522 7.1e-79 298.5 384 46.9
Zm00001eb090430 Zea mays HOM05D006769 ORTHO05D008522 1.9e-71 273.9 270 52.2
CSS0037741 Camellia sinensis var. sinensis HOM05D006769 ORTHO05D008522 4.2e-71 272.7 183 71.0
Peaxi162Scf00335g01510 Petunia axillaris HOM05D006769 ORTHO05D008522 2.7e-70 270.0 192 67.7
Cpa.g.sc8.80 Carica papaya HOM05D006769 ORTHO05D008522 2.1e-67 260.4 350 48.9
Pp3c12_23250 Physcomitrium patens HOM05D006769 ORTHO05D008522 4.8e-67 259.2 265 49.4
Ciclev10032230m.g Citrus clementina HOM05D006769 ORTHO05D008522 4.5e-65 252.7 301 50.5
Sed0011761 Sechium edule HOM05D006769 ORTHO05D008522 9.3e-63 245.0 383 43.9
Haze_03306 Corylus avellana HOM05D006769 ORTHO05D008522 8.7e-61 238.4 267 54.3
Hma1.2p1_0161F.1_g071340 Hydrangea macrophylla HOM05D006769 ORTHO05D008522 3.7e-59 233.0 295 50.2
Nitab4.5_0000038g0100 Nicotiana tabacum HOM05D006769 ORTHO05D008522 7.7e-57 225.3 367 42.5
CBR_g20401 Chara braunii HOM05D006769 ORTHO05D008522 1.3e-56 224.6 296 43.9
SEGI_18025 Sequoiadendron giganteum HOM05D006769 ORTHO05D008522 1.1e-55 221.5 153 68.6
Os06g0470800 Oryza sativa ssp. japonica HOM05D006769 ORTHO05D008522 1.7e-51 207.6 178 58.4
Mapoly0021s0139 Marchantia polymorpha HOM05D006769 ORTHO05D008522 1.8e-50 204.1 263 45.6
CDE09G0834 Ceratophyllum demersum HOM05D006769 ORTHO05D008522 1.7e-43 181.0 335 39.1
MCO07G255 Micromonas commoda HOM05D006769 ORTHO05D008522 1.1e-42 178.3 265 38.1
Haze_03305 Corylus avellana HOM05D006769 ORTHO05D008522 1.5e-41 174.5 114 69.3
PRCOL_00005345 Prasinoderma coloniale HOM05D006769 ORTHO05D008522 8.8e-37 158.7 337 34.4
QL09p046008 Quercus lobata HOM05D006769 ORTHO05D008522 2.2e-35 154.1 101 76.2
VMungo1383G3069 Vigna mungo HOM05D006769 ORTHO05D008522 6.8e-29 132.5 88 68.2
CSS0014368 Camellia sinensis var. sinensis HOM05D006769 ORTHO05D008522 2.0e-28 131.0 228 41.7
RcHm_v2.0_Chr6g0283021 Rosa chinensis HOM05D006769 ORTHO05D008522 2.8e-27 127.1 129 54.3
SGA_v2.0_scaffold77G25292 Striga asiatica HOM05D006769 ORTHO05D008522 3.7e-27 126.7 230 43.0
Cpa.g.sc8.79 Carica papaya HOM05D006769 ORTHO05D008522 1.4e-26 124.8 85 63.5
Cfa021866 Carpinus fangiana HOM05D006769 ORTHO05D008522 4.5e-25 119.8 422 29.4
Cre09.g410000 Chlamydomonas reinhardtii HOM05D006769 ORTHO05D008522 5.5e-23 112.8 143 42.0
CDE02G1388 Ceratophyllum demersum HOM05D007934 ORTHO05D010067 2.8e-19 100.5 85 50.6
MD10G1152700 Malus domestica HOM05D006769 ORTHO05D008522 1.0e-13 82.0 151 37.1
Prupe.2G270900 Prunus persica HOM05D006769 ORTHO05D008522 9.8e-12 75.5 57 56.1
Prupe.6G190400 Prunus persica HOM05D006769 ORTHO05D008522 8.3e-11 72.4 47 61.7
Os06g0471100 Oryza sativa ssp. japonica HOM05D006769 ORTHO05D008522 1.1e-07 62.0 175 33.7
vmacro02813 Vaccinium macrocarpon HOM05D006769 ORTHO05D008522 1.9e-07 61.2 137 36.5


User provided reference genes

Program Settings