Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGR044G2499 Punica granatum HOM05D006333 ORTHO05D007799 1.3e-123 446.4 226 100.0
COL.COLO4_08588 Corchorus olitorius HOM05D006333 ORTHO05D007799 5.1e-96 354.8 216 81.0
Eucgr.J00869 Eucalyptus grandis HOM05D006333 ORTHO05D007799 3.3e-95 352.1 220 77.3
Thecc.02G159600 Theobroma cacao HOM05D006333 ORTHO05D007799 8.1e-94 347.4 223 78.9
AT1G17330 Arabidopsis thaliana HOM05D006333 ORTHO05D007799 1.8e-93 346.3 220 76.4
CARHR017920 Cardamine hirsuta HOM05D006333 ORTHO05D007799 4.0e-93 345.1 220 76.8
Duzib132G1109 Durio zibethinus HOM05D006333 ORTHO05D007799 4.0e-93 345.1 216 80.6
Ciclev10032700m.g Citrus clementina HOM05D006333 ORTHO05D007799 5.2e-93 344.7 216 78.7
AL1G29580 Arabidopsis lyrata HOM05D006333 ORTHO05D007799 6.8e-93 344.4 220 75.9
Gohir.A13G060400 Gossypium hirsutum HOM05D006333 ORTHO05D007799 5.8e-92 341.3 216 79.2
Gohir.D13G061500 Gossypium hirsutum HOM05D006333 ORTHO05D007799 1.7e-91 339.7 216 79.2
THA.LOC104808350 Tarenaya hassleriana HOM05D006333 ORTHO05D007799 3.7e-91 338.6 218 76.1
Gorai.013G070000 Gossypium raimondii HOM05D006333 ORTHO05D007799 1.1e-90 337.0 222 77.5
CSS0049289 Camellia sinensis var. sinensis HOM05D006333 ORTHO05D007799 5.4e-90 334.7 216 79.2
CiPaw.05G169800 Carya illinoinensis HOM05D006333 ORTHO05D007799 7.1e-90 334.3 216 75.9
Aa31LG7G2140 Aethionema arabicum HOM05D006333 ORTHO05D007799 1.6e-89 333.2 217 76.0
Phvul.011G028900 Phaseolus vulgaris HOM05D006333 ORTHO05D007799 1.6e-89 333.2 217 75.1
Thhalv10008690m.g Eutrema salsugineum HOM05D006333 ORTHO05D007799 2.1e-89 332.8 219 75.3
Manes.04G057700 Manihot esculenta HOM05D006333 ORTHO05D007799 2.1e-89 332.8 219 76.3
Carub.0001s1708 Capsella rubella HOM05D006333 ORTHO05D007799 2.7e-89 332.4 218 75.2
Lj3g0001632 Lotus japonicus HOM05D006333 ORTHO05D007799 2.7e-89 332.4 215 75.3
Glyma.12G026000 Glycine max HOM05D006333 ORTHO05D007799 4.6e-89 331.6 214 75.7
Medtr4g023480 Medicago truncatula HOM05D006333 ORTHO05D007799 4.6e-89 331.6 218 74.8
Lj3A849G43 Lonicera japonica HOM05D006333 ORTHO05D007799 6.0e-89 331.3 216 75.0
Hma1.2p1_0044F.1_g026090 Hydrangea macrophylla HOM05D006333 ORTHO05D007799 1.3e-88 330.1 216 75.0
Psat7g233400 Pisum sativum HOM05D006333 ORTHO05D007799 1.3e-88 330.1 215 76.7
FvH4_4g36970 Fragaria vesca HOM05D006333 ORTHO05D007799 1.7e-88 329.7 219 75.8
GSVIVG01012055001 Vitis vinifera HOM05D006333 ORTHO05D007799 1.7e-88 329.7 205 79.5
MELO3C024016.2 Cucumis melo HOM05D006333 ORTHO05D007799 3.9e-88 328.6 216 75.5
Dinv17616 Davidia involucrata HOM05D006333 ORTHO05D007799 3.9e-88 328.6 234 72.2
FAN07G1904 Fragaria x ananassa HOM05D006333 ORTHO05D007799 3.9e-88 328.6 219 74.9
PSO782G2700 Papaver somniferum HOM05D006333 ORTHO05D007799 8.6e-88 327.4 223 73.5
VMungo1127G0165 Vigna mungo HOM05D006333 ORTHO05D007799 8.6e-88 327.4 217 74.7
CANSAT56G2519 Cannabis sativa HOM05D006333 ORTHO05D007799 1.1e-87 327.0 216 75.0
Sed0022709 Sechium edule HOM05D006333 ORTHO05D007799 1.5e-87 326.6 216 75.0
CsaV3_3G031750 Cucumis sativus L. HOM05D006333 ORTHO05D007799 4.3e-87 325.1 216 75.0
Nitab4.5_0008825g0020 Nicotiana tabacum HOM05D006333 ORTHO05D007799 5.6e-87 324.7 217 73.3
Hund24376 Selenicereus undatus HOM05D006333 ORTHO05D007799 5.6e-87 324.7 214 76.2
BcaC05g25649 Brassica carinata HOM05D006333 ORTHO05D007799 9.6e-87 323.9 220 74.5
BolC5t30276H Brassica oleracea HOM05D006333 ORTHO05D007799 9.6e-87 323.9 220 74.5
Ca_19901_v3 Cicer arietinum L. HOM05D006333 ORTHO05D007799 1.2e-86 323.6 216 74.1
Sp1g15450 Schrenkiella parvula HOM05D006333 ORTHO05D007799 1.6e-86 323.2 220 73.6
C05p15710 Brassica napus HOM05D006333 ORTHO05D007799 2.8e-86 322.4 220 74.1
HanXRQChr12g0366301 Helianthus annuus HOM05D006333 ORTHO05D007799 2.8e-86 322.4 216 74.1
Prupe.1G347700 Prunus persica HOM05D006333 ORTHO05D007799 2.8e-86 322.4 220 73.6
ECA233G4371 Erigeron canadensis HOM05D006333 ORTHO05D007799 6.2e-86 321.2 222 73.0
Rhsim09G0071800 Rhododendron simsii HOM05D006333 ORTHO05D007799 6.2e-86 321.2 221 73.8
EL10Ac9g22952 Beta vulgaris HOM05D006333 ORTHO05D007799 8.1e-86 320.9 221 71.5
Solyc02g014720.4 Solanum lycopersicum HOM05D006333 ORTHO05D007799 8.1e-86 320.9 217 71.9
MSTRG.11948 Avicennia marina HOM05D006333 ORTHO05D007799 1.1e-85 320.5 217 71.9
Potri.007G072000 Populus trichocarpa HOM05D006333 ORTHO05D007799 1.4e-85 320.1 216 75.9
Sopen02g004090 Solanum pennellii HOM05D006333 ORTHO05D007799 1.8e-85 319.7 217 71.9
MD13G1004800 Malus domestica HOM05D006333 ORTHO05D007799 2.4e-85 319.3 221 73.8
Nitab4.5_0003092g0070 Nicotiana tabacum HOM05D006333 ORTHO05D007799 2.4e-85 319.3 210 75.2
Sc17g0000100 Simmondsia chinensis HOM05D006333 ORTHO05D007799 3.1e-85 318.9 219 73.1
TWI53G1586 Tripterygium wilfordii HOM05D006333 ORTHO05D007799 3.1e-85 318.9 216 73.1
Aqoxy3G04253 Aquilegia oxysepala HOM05D006333 ORTHO05D007799 5.2e-85 318.2 224 71.9
RcHm_v2.0_Chr4g0446761 Rosa chinensis HOM05D006333 ORTHO05D007799 5.2e-85 318.2 217 74.2
CAN.G1011.5 Capsicum annuum HOM05D006333 ORTHO05D007799 1.2e-84 317.0 217 72.4
Atru.chr11.1164 Acer truncatum HOM05D006333 ORTHO05D007799 3.4e-84 315.5 221 69.7
BraA06t24479Z Brassica rapa HOM05D006333 ORTHO05D007799 4.4e-84 315.1 220 72.7
A06p13260 Brassica napus HOM05D006333 ORTHO05D007799 7.6e-84 314.3 220 72.7
MBI06_g42293_MAGBIO Magnolia biondii HOM05D006333 ORTHO05D007799 7.6e-84 314.3 219 74.9
Prupe.1G347900 Prunus persica HOM05D006333 ORTHO05D007799 7.6e-84 314.3 219 71.7
Cfa008751 Carpinus fangiana HOM05D006333 ORTHO05D007799 9.9e-84 313.9 216 73.6
BcaB07g34033 Brassica carinata HOM05D006333 ORTHO05D007799 1.7e-83 313.2 223 71.3
FAN17G3063 Fragaria x ananassa HOM05D006333 ORTHO05D007799 1.7e-83 313.2 243 67.5
Nn5g28807 Nelumbo nucifera HOM05D006333 ORTHO05D007799 1.7e-83 313.2 224 70.1
Eucgr.J00870 Eucalyptus grandis HOM05D006333 ORTHO05D007799 4.2e-82 308.5 209 73.2
Migut.A00709 Erythranthe guttata HOM05D006333 ORTHO05D007799 7.1e-82 307.8 217 70.0
Lsat_1_v5_gn_8_33120 Lactuca sativa HOM05D006333 ORTHO05D007799 2.1e-81 306.2 220 72.7
Peaxi162Scf00334g00421 Petunia axillaris HOM05D006333 ORTHO05D007799 1.0e-80 303.9 199 77.9
unitig_32.g11605 Utricularia gibba HOM05D006333 ORTHO05D007799 1.3e-80 303.5 216 68.1
TPR.G9857 Trifolium pratense HOM05D006333 ORTHO05D007799 2.5e-79 299.3 194 75.8
CSS0015547 Camellia sinensis var. sinensis HOM05D006333 ORTHO05D007799 5.6e-79 298.1 216 72.7
Atru.chr11.2675 Acer truncatum HOM05D006333 ORTHO05D007799 1.3e-78 297.0 215 68.8
ATR0618G379 Amborella trichopoda HOM05D006333 ORTHO05D007799 1.3e-78 297.0 218 67.4
FAN12G1853 Fragaria x ananassa HOM05D006333 ORTHO05D007799 2.8e-78 295.8 220 70.0
Atru.chr11.2676 Acer truncatum HOM05D006333 ORTHO05D007799 8.1e-78 294.3 215 68.4
Cc11_g02420 Coffea canephora HOM05D006333 ORTHO05D007799 1.4e-77 293.5 222 70.3
PSO063G3232 Papaver somniferum HOM05D006333 ORTHO05D007799 2.0e-76 289.7 246 63.4
ClCG10G012010 Citrullus lanatus HOM05D006333 ORTHO05D007799 1.7e-75 286.6 203 72.9
Lalb_Chr01g0001411 Lupinus albus HOM05D006333 ORTHO05D007799 1.7e-75 286.6 215 66.0
Os10g0486000 Oryza sativa ssp. japonica HOM05D006333 ORTHO05D007799 2.2e-75 286.2 223 64.1
DCAR_008496 Daucus carota HOM05D003141 ORTHO05D003633 6.4e-75 284.6 190 76.3
Sabra07G0060700 Salix brachista HOM05D006333 ORTHO05D007799 8.4e-75 284.3 253 62.8
SGA_v2.0_scaffold146G36264 Striga asiatica HOM05D006333 ORTHO05D007799 4.2e-74 282.0 253 59.3
arahy.Tifrunner.gnm1.ann1.A0JP3J Arachis hypogaea HOM05D006333 ORTHO05D007799 9.3e-74 280.8 224 67.4
AUR62017701 Chenopodium quinoa HOM05D006333 ORTHO05D007799 4.6e-73 278.5 215 67.0
arahy.Tifrunner.gnm1.ann1.N7V6FU Arachis hypogaea HOM05D006333 ORTHO05D007799 7.9e-73 277.7 239 63.2
Ah.01g001500 Amaranthus hybridus HOM05D006333 ORTHO05D007799 3.6e-70 268.9 178 73.6
HPP92_008575 Vanilla planifolia HOM05D006333 ORTHO05D007799 4.0e-69 265.4 218 62.8
AUR62032988 Chenopodium quinoa HOM05D006333 ORTHO05D007799 9.0e-69 264.2 205 66.8
Actinidia11766 Actinidia chinensis HOM05D006333 ORTHO05D007799 4.5e-68 261.9 219 63.9
SMO116G0442 Selaginella moellendorffii HOM05D006333 ORTHO05D007799 6.7e-64 248.1 214 60.3
Pp3c7_23360 Physcomitrium patens HOM05D006333 ORTHO05D007799 1.5e-60 236.9 225 55.6
Cpa.g.sc0.135 Carica papaya HOM05D006333 ORTHO05D007799 8.4e-59 231.1 151 74.2
SalBow7G0482 Salvia bowleyana HOM05D006333 ORTHO05D007799 9.3e-58 227.6 266 50.8
SGA_v2.0_scaffold173G39125 Striga asiatica HOM05D006333 ORTHO05D007799 5.1e-56 221.9 158 67.7
Haze_11767 Corylus avellana HOM05D006333 ORTHO05D007799 1.1e-55 220.7 189 64.0
TAR629G0175 Trochodendron aralioides HOM05D006333 ORTHO05D007799 3.3e-55 219.2 151 72.2
MCO07G572 Micromonas commoda HOM05D006333 ORTHO05D007799 9.6e-55 217.6 226 52.7
CDE02G3779 Ceratophyllum demersum HOM05D006333 ORTHO05D007799 6.3e-54 214.9 204 58.3
Cre05.g234647 Chlamydomonas reinhardtii HOM05D006333 ORTHO05D007799 1.8e-53 213.4 229 53.3
Zm00001eb045350 Zea mays HOM05D006333 ORTHO05D007799 4.3e-47 192.2 141 65.2
Actinidia13050 Actinidia chinensis HOM05D006333 ORTHO05D007799 5.3e-45 185.3 198 55.1
vmacro16037 Vaccinium macrocarpon HOM05D006333 ORTHO05D007799 9.0e-45 184.5 157 61.1
PRCOL_00000482 Prasinoderma coloniale HOM05D006333 ORTHO05D007799 1.1e-42 177.6 224 46.9
CBR_g5629 Chara braunii HOM05D006333 ORTHO05D007799 1.1e-37 161.0 388 32.2
Mapoly0006s0058 Marchantia polymorpha HOM05D006333 ORTHO05D007799 5.3e-37 158.7 151 51.7
QL03p044200 Quercus lobata HOM05D006333 ORTHO05D007799 8.8e-32 141.4 84 79.8
SalBow1G5083 Salvia bowleyana HOM05D006333 ORTHO05D007799 3.3e-31 139.4 103 67.0
Ah.05g173900 Amaranthus hybridus HOM05D006333 ORTHO05D007799 1.5e-26 124.0 95 61.1
Thecc.08G107200 Theobroma cacao HOM05D006333 ORTHO05D007799 2.8e-22 109.8 70 75.7
Aa31sc968G10 Aethionema arabicum HOM05D006333 ORTHO05D007799 1.1e-21 107.8 140 46.4
Haze_06289 Corylus avellana HOM05D006333 ORTHO05D007799 1.9e-18 97.1 51 90.2
Cpa.g.sc0.136 Carica papaya HOM05D006333 ORTHO05D007799 5.5e-18 95.5 60 78.3
QL03p044193 Quercus lobata HOM05D006333 ORTHO05D007799 1.2e-17 94.4 134 42.5
Oeu044913.1 Olea europaea HOM05D006333 ORTHO05D007799 1.8e-16 90.5 67 70.1
SalBow1G0042 Salvia bowleyana HOM05D006333 ORTHO05D007799 3.0e-16 89.7 62 69.4
Haze_18642 Corylus avellana HOM05D006333 ORTHO05D007799 5.2e-16 89.0 52 82.7
Cfa024705 Carpinus fangiana HOM05D006333 ORTHO05D007799 2.8e-14 83.2 191 33.5
Cfa023716 Carpinus fangiana HOM05D006333 ORTHO05D007799 2.0e-12 77.0 296 26.4
MBI06_g42292_MAGBIO Magnolia biondii HOM05D006333 ORTHO05D007799 5.9e-12 75.5 51 74.5
TAR629G1621 Trochodendron aralioides HOM05D006333 ORTHO05D007799 1.5e-10 70.9 50 72.0
Aa31LG4G11880 Aethionema arabicum HOM05D006333 ORTHO05D007799 3.4e-07 59.7 57 57.9
Aa31sc286G50 Aethionema arabicum HOM05D006333 ORTHO05D007799 7.5e-07 58.5 45 66.7


User provided reference genes

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