Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGR044G2495 Punica granatum HOM05D006214 ORTHO05D007723 7.8e-94 347.1 167 100.0
Thecc.09G038200 Theobroma cacao HOM05D006214 ORTHO05D007723 8.9e-82 307.0 166 87.3
COL.COLO4_18710 Corchorus olitorius HOM05D006214 ORTHO05D007723 7.6e-81 303.9 166 86.1
Eucgr.C02883 Eucalyptus grandis HOM05D006214 ORTHO05D007723 2.2e-80 302.4 166 86.7
GSVIVG01035713001 Vitis vinifera HOM05D006214 ORTHO05D007723 1.1e-79 300.1 166 86.7
Ciclev10009715m.g Citrus clementina HOM05D006214 ORTHO05D007723 1.9e-79 299.3 166 86.7
Potri.006G244300 Populus trichocarpa HOM05D006214 ORTHO05D007723 1.9e-79 299.3 167 85.6
Cpa.g.sc205.8 Carica papaya HOM05D006214 ORTHO05D007723 5.4e-79 297.7 166 85.5
TWI34G1412 Tripterygium wilfordii HOM05D006214 ORTHO05D007723 5.4e-79 297.7 166 84.3
Duzib150G0825 Durio zibethinus HOM05D006214 ORTHO05D007723 1.6e-78 296.2 167 84.4
Manes.03G064300 Manihot esculenta HOM05D006214 ORTHO05D007723 1.6e-78 296.2 166 84.3
QL12p026136 Quercus lobata HOM05D006214 ORTHO05D007723 1.6e-78 296.2 165 85.5
Dinv30243 Davidia involucrata HOM05D006214 ORTHO05D007723 2.1e-78 295.8 166 83.7
Lsat_1_v5_gn_6_11341 Lactuca sativa HOM05D006214 ORTHO05D007723 2.7e-78 295.4 166 83.1
Nn8g39214 Nelumbo nucifera HOM05D006214 ORTHO05D007723 3.5e-78 295.0 166 84.3
Oeu011261.1 Olea europaea HOM05D006214 ORTHO05D007723 6.0e-78 294.3 166 83.7
Nitab4.5_0002393g0090 Nicotiana tabacum HOM05D006214 ORTHO05D007723 1.3e-77 293.1 166 84.3
Actinidia31216 Actinidia chinensis HOM05D006214 ORTHO05D007723 2.3e-77 292.4 166 84.3
CiPaw.07G208400 Carya illinoinensis HOM05D006214 ORTHO05D007723 2.3e-77 292.4 165 84.2
Cc08_g08530 Coffea canephora HOM05D006214 ORTHO05D007723 2.3e-77 292.4 164 84.8
PSO782G3114 Papaver somniferum HOM05D006214 ORTHO05D007723 2.3e-77 292.4 166 83.7
Solyc08g068070.3 Solanum lycopersicum HOM05D006214 ORTHO05D007723 3.9e-77 291.6 166 83.1
Aqoxy7G01701 Aquilegia oxysepala HOM05D006214 ORTHO05D007723 6.6e-77 290.8 167 84.4
Nitab4.5_0000250g0190 Nicotiana tabacum HOM05D006214 ORTHO05D007723 8.6e-77 290.4 166 83.7
Oeu014655.1 Olea europaea HOM05D006214 ORTHO05D007723 8.6e-77 290.4 166 84.3
Sc06g0000690 Simmondsia chinensis HOM05D006214 ORTHO05D007723 1.1e-76 290.0 166 81.9
CSS0015630 Camellia sinensis var. sinensis HOM05D006214 ORTHO05D007723 1.5e-76 289.7 166 83.1
CSS0049547 Camellia sinensis var. sinensis HOM05D006214 ORTHO05D007723 1.5e-76 289.7 166 83.1
Gohir.D13G192400 Gossypium hirsutum HOM05D006214 ORTHO05D007723 1.9e-76 289.3 167 82.6
Gorai.013G218300 Gossypium raimondii HOM05D006214 ORTHO05D007723 1.9e-76 289.3 167 82.6
CiPaw.08G022500 Carya illinoinensis HOM05D006214 ORTHO05D007723 2.5e-76 288.9 165 81.8
Thhalv10026389m.g Eutrema salsugineum HOM05D006214 ORTHO05D007723 5.6e-76 287.7 169 81.7
PSO063G0005 Papaver somniferum HOM05D006214 ORTHO05D007723 5.6e-76 287.7 166 82.5
Manes.16G067000 Manihot esculenta HOM05D006214 ORTHO05D007723 7.3e-76 287.3 166 81.9
Medtr1g008700 Medicago truncatula HOM05D006214 ORTHO05D007723 7.3e-76 287.3 167 82.0
THA.LOC104803814 Tarenaya hassleriana HOM05D006214 ORTHO05D007723 9.6e-76 287.0 169 80.5
AUR62032401 Chenopodium quinoa HOM05D006214 ORTHO05D007723 1.2e-75 286.6 166 81.3
Sopen08g021960 Solanum pennellii HOM05D006214 ORTHO05D007723 1.2e-75 286.6 167 82.0
HanXRQChr07g0192221 Helianthus annuus HOM05D006214 ORTHO05D007723 2.1e-75 285.8 166 80.1
Hund25645 Selenicereus undatus HOM05D006214 ORTHO05D007723 2.1e-75 285.8 166 81.9
PGSC0003DMG400014492 Solanum tuberosum HOM05D006214 ORTHO05D007723 3.6e-75 285.0 166 81.3
Aa31LG2G16930 Aethionema arabicum HOM05D006214 ORTHO05D007723 4.7e-75 284.6 169 81.1
Hma1.2p1_0003F.1_g003500 Hydrangea macrophylla HOM05D006214 ORTHO05D007723 8.1e-75 283.9 166 80.7
Rhsim02G0184100 Rhododendron simsii HOM05D006214 ORTHO05D007723 8.1e-75 283.9 163 82.8
Sp7g30450 Schrenkiella parvula HOM05D006214 ORTHO05D007723 8.1e-75 283.9 169 79.9
VMungo0647G2273 Vigna mungo HOM05D006214 ORTHO05D007723 8.1e-75 283.9 166 81.9
MELO3C011160.2 Cucumis melo HOM05D006214 ORTHO05D007723 1.8e-74 282.7 162 82.1
CANSAT25G2048 Cannabis sativa HOM05D006214 ORTHO05D007723 2.4e-74 282.3 165 81.2
CsaV3_2G031100 Cucumis sativus L. HOM05D006214 ORTHO05D007723 2.4e-74 282.3 162 82.1
Prupe.1G454300 Prunus persica HOM05D006214 ORTHO05D007723 2.4e-74 282.3 168 79.8
Sed0020806 Sechium edule HOM05D006214 ORTHO05D007723 6.9e-74 280.8 162 81.5
C01p06220 Brassica napus HOM05D003889 ORTHO05D004407 9.0e-74 280.4 168 80.4
Actinidia13304 Actinidia chinensis HOM05D006214 ORTHO05D007723 1.2e-73 280.0 153 86.3
Lalb_Chr22g0361001 Lupinus albus HOM05D006214 ORTHO05D007723 1.2e-73 280.0 155 83.2
BolC1t00620H Brassica oleracea HOM05D006214 ORTHO05D007723 1.5e-73 279.6 169 79.9
Migut.A00249 Erythranthe guttata HOM05D006214 ORTHO05D007723 1.5e-73 279.6 166 80.1
Psat6g005800 Pisum sativum HOM05D006214 ORTHO05D007723 1.5e-73 279.6 166 80.1
A01p05650 Brassica napus HOM05D003889 ORTHO05D004407 2.0e-73 279.3 155 83.9
Haze_21823 Corylus avellana HOM05D006214 ORTHO05D007723 2.0e-73 279.3 165 81.8
RcHm_v2.0_Chr6g0305591 Rosa chinensis HOM05D006214 ORTHO05D007723 2.6e-73 278.9 158 82.9
TPR.G12079 Trifolium pratense HOM05D006214 ORTHO05D007723 2.6e-73 278.9 166 80.1
ATR1120G189 Amborella trichopoda HOM05D006214 ORTHO05D007723 4.4e-73 278.1 166 80.1
DCAR_001036 Daucus carota HOM05D006214 ORTHO05D007723 7.6e-73 277.3 154 85.1
AL7G19050 Arabidopsis lyrata HOM05D006214 ORTHO05D007723 9.9e-73 276.9 171 78.4
BraA01t00535Z Brassica rapa HOM05D003889 ORTHO05D004407 9.9e-73 276.9 153 84.3
arahy.Tifrunner.gnm1.ann1.72Y1Y4 Arachis hypogaea HOM05D006214 ORTHO05D007723 1.3e-72 276.6 167 80.2
Carub.0007s0784 Capsella rubella HOM05D006214 ORTHO05D007723 1.3e-72 276.6 171 77.8
TAR624G0931 Trochodendron aralioides HOM05D006214 ORTHO05D007723 1.3e-72 276.6 166 79.5
Ca_12821_v3 Cicer arietinum L. HOM05D006214 ORTHO05D007723 2.2e-72 275.8 166 78.3
Ca_12822_v3 Cicer arietinum L. HOM05D006214 ORTHO05D007723 2.2e-72 275.8 166 78.3
Cfa013332 Carpinus fangiana HOM05D006214 ORTHO05D007723 3.8e-72 275.0 165 80.6
Duzib168G0494 Durio zibethinus HOM05D006214 ORTHO05D007723 3.8e-72 275.0 166 79.5
SGA_v2.0_scaffold27G11530 Striga asiatica HOM05D006214 ORTHO05D007723 3.8e-72 275.0 173 78.0
BcaC09g52063 Brassica carinata HOM05D003889 ORTHO05D004407 8.4e-72 273.9 168 79.2
FAN15G3028 Fragaria x ananassa HOM05D006214 ORTHO05D007723 1.1e-71 273.5 156 81.4
Phvul.001G060001 Phaseolus vulgaris HOM05D006214 ORTHO05D007723 1.1e-71 273.5 166 77.7
arahy.Tifrunner.gnm1.ann1.8TR5WT Arachis hypogaea HOM05D006214 ORTHO05D007723 1.9e-71 272.7 167 79.0
AT4G32690 Arabidopsis thaliana HOM05D006214 ORTHO05D007723 2.4e-71 272.3 171 76.6
CARHR240670 Cardamine hirsuta HOM05D006214 ORTHO05D007723 7.1e-71 270.8 162 80.2
Glyma.14G140400 Glycine max HOM05D006214 ORTHO05D007723 1.2e-70 270.0 166 77.7
Lj1g0018426 Lotus japonicus HOM05D006214 ORTHO05D007723 4.6e-70 268.1 163 78.5
Peaxi162Scf00105g00059 Petunia axillaris HOM05D006214 ORTHO05D007723 1.7e-69 266.2 166 77.1
SEGI_02532 Sequoiadendron giganteum HOM05D006214 ORTHO05D007723 3.0e-69 265.4 156 78.8
Eucgr.L03669 Eucalyptus grandis HOM05D006214 ORTHO05D007723 3.9e-69 265.0 166 78.9
Solyc08g068090.3 Solanum lycopersicum HOM05D006214 ORTHO05D007723 3.9e-69 265.0 164 77.4
Zm00001eb386050 Zea mays HOM05D006214 ORTHO05D007723 3.9e-69 265.0 166 75.3
Sopen08g021970 Solanum pennellii HOM05D006214 ORTHO05D007723 6.6e-69 264.2 165 77.0
Psat0s1478g0160 Pisum sativum HOM05D006214 ORTHO05D007723 2.5e-68 262.3 166 76.5
MD15G1099500 Malus domestica HOM05D006214 ORTHO05D007723 7.3e-68 260.8 157 79.0
VMungo1309G2769 Vigna mungo HOM05D006214 ORTHO05D007723 7.3e-68 260.8 166 75.9
Lj1g0018927 Lotus japonicus HOM05D006214 ORTHO05D007723 9.6e-68 260.4 165 75.2
Lj8A606G25 Lonicera japonica HOM05D006214 ORTHO05D007723 1.3e-67 260.0 188 69.1
Lalb_Chr08g0243361 Lupinus albus HOM05D006214 ORTHO05D007723 2.8e-67 258.8 168 75.0
FAN20G2536 Fragaria x ananassa HOM05D006214 ORTHO05D007723 4.8e-67 258.1 156 78.2
Ah.12g061040 Amaranthus hybridus HOM05D006214 ORTHO05D007723 8.1e-67 257.3 166 76.5
Medtr3g109420 Medicago truncatula HOM05D006214 ORTHO05D007723 8.1e-67 257.3 166 75.9
Phvul.009G104900 Phaseolus vulgaris HOM05D006214 ORTHO05D007723 8.1e-67 257.3 163 73.6
FvH4_2g36290 Fragaria vesca HOM05D006214 ORTHO05D007723 1.1e-66 256.9 156 77.6
Glyma.04G079200 Glycine max HOM05D006214 ORTHO05D007723 6.9e-66 254.2 166 72.9
FAN27G2409 Fragaria x ananassa HOM05D006214 ORTHO05D007723 9.0e-66 253.8 156 76.9
Atru.chr7.2182 Acer truncatum HOM05D006214 ORTHO05D007723 2.6e-65 252.3 139 82.7
Atru.chr7.2299 Acer truncatum HOM05D006214 ORTHO05D007723 2.6e-65 252.3 139 82.7
Os06g0591600 Oryza sativa ssp. japonica HOM05D006214 ORTHO05D007723 2.6e-65 252.3 169 72.2
TPR.G1342 Trifolium pratense HOM05D006214 ORTHO05D007723 5.8e-65 251.1 168 75.0
HPP92_005176 Vanilla planifolia HOM05D006214 ORTHO05D007723 2.9e-64 248.8 190 65.3
Ca_15627_v3 Cicer arietinum L. HOM05D006214 ORTHO05D007723 4.9e-64 248.1 161 73.9
Sabra06G0191200 Salix brachista HOM05D006214 ORTHO05D007723 4.8e-59 231.5 168 72.0
Gohir.D05G051050 Gossypium hirsutum HOM05D006214 ORTHO05D007723 1.8e-58 229.6 180 64.4
SMO164G0258 Selaginella moellendorffii HOM05D006214 ORTHO05D007723 3.1e-58 228.8 150 71.3
Pp3c1_3380 Physcomitrium patens HOM05D006214 ORTHO05D007723 4.0e-58 228.4 151 72.2
AagrBONN_evm.TU.Sc2ySwM_368.1910 Anthoceros agrestis HOM05D006214 ORTHO05D007723 9.9e-57 223.8 158 70.9
arahy.Tifrunner.gnm1.ann1.LJ0T63 Arachis hypogaea HOM05D006214 ORTHO05D007723 9.9e-57 223.8 142 76.8
ECA233G3302 Erigeron canadensis HOM05D006214 ORTHO05D007723 3.8e-56 221.9 309 43.7
AUR62024819 Chenopodium quinoa HOM05D006214 ORTHO05D007723 4.2e-55 218.4 121 83.5
unitig_0.g2807 Utricularia gibba HOM05D006435 ORTHO05D008262 9.3e-55 217.2 141 73.8
Pp3c6_250 Physcomitrium patens HOM05D006214 ORTHO05D007723 2.1e-54 216.1 159 63.5
CAN.G886.7 Capsicum annuum HOM05D006214 ORTHO05D007723 2.3e-53 212.6 134 76.9
Gorai.009G052700 Gossypium raimondii HOM05D006214 ORTHO05D007723 2.4e-50 202.6 113 82.3
EL10Ac2g02522 Beta vulgaris HOM05D006214 ORTHO05D007723 1.2e-46 190.3 167 60.5
MBI04_g08934_MAGBIO Magnolia biondii HOM05D006214 ORTHO05D003073 1.3e-40 170.2 304 38.5
TAR636G1550 Trochodendron aralioides HOM05D006214 ORTHO05D007723 1.5e-36 156.8 218 44.5
ClCG08G012410 Citrullus lanatus HOM05D006214 ORTHO05D007723 1.9e-36 156.4 203 46.3
CSS0020447 Camellia sinensis var. sinensis HOM05D006214 ORTHO05D007723 8.8e-29 131.0 84 77.4
Potri.018G036200 Populus trichocarpa HOM05D006214 ORTHO05D007723 1.7e-27 126.7 78 75.6
Lsat_1_v5_gn_6_11301 Lactuca sativa HOM05D006214 ORTHO05D007723 4.1e-26 122.1 67 85.1
CSS0007395 Camellia sinensis var. sinensis HOM05D006214 ORTHO05D007723 1.2e-25 120.6 70 75.7
C01p47490 Brassica napus HOM05D006214 ORTHO05D007723 1.4e-21 107.1 55 83.6
BolC1t04720H Brassica oleracea HOM05D006214 ORTHO05D007723 1.9e-15 86.7 44 81.8
Peaxi162Scf00105g00513 Petunia axillaris HOM05D006214 ORTHO05D007723 3.3e-12 75.9 88 45.5
Glyma.06G080700 Glycine max HOM05D006214 ORTHO05D007723 1.7e-11 73.6 67 50.7
HanXRQChr07g0195131 Helianthus annuus HOM05D006214 ORTHO05D007723 4.8e-11 72.0 45 75.6
arahy.Tifrunner.gnm1.ann1.YGZX15 Arachis hypogaea HOM05D000254 ORTHO05D000165 9.1e-10 67.8 139 33.1
Nitab4.5_0000250g0200 Nicotiana tabacum HOM05D006214 ORTHO05D007723 2.5e-07 59.7 38 71.1


User provided reference genes

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