Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGR044G2476 Punica granatum HOM05D007327 ORTHO05D009342 2.4e-187 658.7 334 100.0
PGR100G0004 Punica granatum HOM05D007327 ORTHO05D009342 2.4e-187 658.7 334 100.0
PGR080G0004 Punica granatum HOM05D007327 ORTHO05D009342 1.2e-186 656.4 334 99.4
Ciclev10001558m.g Citrus clementina HOM05D007327 ORTHO05D009342 4.3e-144 515.0 355 72.4
COL.COLO4_08563 Corchorus olitorius HOM05D007327 ORTHO05D009342 9.0e-142 507.3 355 71.8
Gohir.D01G089200 Gossypium hirsutum HOM05D007327 ORTHO05D009342 5.8e-141 504.6 354 71.8
Gorai.002G114900 Gossypium raimondii HOM05D007327 ORTHO05D009342 7.6e-141 504.2 354 71.8
Thecc.08G153100 Theobroma cacao HOM05D007327 ORTHO05D009342 1.7e-140 503.1 354 71.5
Eucgr.F04237 Eucalyptus grandis HOM05D007327 ORTHO05D009342 6.5e-140 501.1 355 68.2
Manes.18G092400 Manihot esculenta HOM05D007327 ORTHO05D009342 5.5e-139 498.0 354 67.5
Prupe.8G031100 Prunus persica HOM05D007327 ORTHO05D009342 7.1e-139 497.7 355 67.0
Dinv25868 Davidia involucrata HOM05D007327 ORTHO05D009342 2.1e-138 496.1 361 66.8
Gohir.A01G103900 Gossypium hirsutum HOM05D007327 ORTHO05D009342 2.7e-138 495.7 354 70.6
GSVIVG01034535001 Vitis vinifera HOM05D007327 ORTHO05D009342 4.6e-138 495.0 352 68.5
CSS0015629 Camellia sinensis var. sinensis HOM05D007327 ORTHO05D009342 1.9e-136 489.6 354 69.2
Potri.002G067900 Populus trichocarpa HOM05D007327 ORTHO05D009342 5.7e-136 488.0 352 70.2
Atru.chr13.2102 Acer truncatum HOM05D007327 ORTHO05D009342 7.4e-136 487.6 355 69.6
Cfa018321 Carpinus fangiana HOM05D007327 ORTHO05D009342 1.3e-135 486.9 355 65.9
Hma1.2p1_0105F.1_g050650 Hydrangea macrophylla HOM05D007327 ORTHO05D009342 1.8e-134 483.0 352 66.2
TAR628G0726 Trochodendron aralioides HOM05D007327 ORTHO05D009342 2.4e-134 482.6 356 65.4
Actinidia17791 Actinidia chinensis HOM05D007327 ORTHO05D009342 1.0e-132 477.2 354 64.4
TWI60G1090 Tripterygium wilfordii HOM05D007327 ORTHO05D009342 1.7e-132 476.5 354 63.8
RcHm_v2.0_Chr6g0275381 Rosa chinensis HOM05D007327 ORTHO05D009342 5.0e-132 474.9 353 63.7
FvH4_2g13700 Fragaria vesca HOM05D007327 ORTHO05D009342 1.4e-131 473.4 354 63.8
MD05G1026600 Malus domestica HOM05D007327 ORTHO05D009342 5.5e-131 471.5 355 64.2
CANSAT25G1895 Cannabis sativa HOM05D007327 ORTHO05D009342 2.1e-130 469.5 355 61.7
Sed0007638 Sechium edule HOM05D007327 ORTHO05D009342 7.9e-130 467.6 354 62.4
arahy.Tifrunner.gnm1.ann1.S2I56E Arachis hypogaea HOM05D007327 ORTHO05D009342 1.9e-128 463.0 353 67.1
Duzib093G0512 Durio zibethinus HOM05D007327 ORTHO05D009342 3.3e-128 462.2 336 72.3
ECA247G1449 Erigeron canadensis HOM05D007327 ORTHO05D009342 3.3e-128 462.2 354 61.9
HanXRQChr04g0108941 Helianthus annuus HOM05D007327 ORTHO05D009342 3.3e-128 462.2 353 60.6
Nn5g28751 Nelumbo nucifera HOM05D007327 ORTHO05D009342 1.6e-127 459.9 352 63.6
Peaxi162Scf00599g00511 Petunia axillaris HOM05D007327 ORTHO05D009342 2.8e-127 459.1 351 62.1
arahy.Tifrunner.gnm1.ann1.LUB646 Arachis hypogaea HOM05D007327 ORTHO05D009342 3.7e-127 458.8 353 66.9
Lalb_Chr19g0130241 Lupinus albus HOM05D007327 ORTHO05D009342 3.7e-127 458.8 354 66.9
Glyma.02G081500 Glycine max HOM05D007327 ORTHO05D009342 8.2e-127 457.6 352 63.1
CiPaw.15G016000 Carya illinoinensis HOM05D007327 ORTHO05D009342 4.1e-126 455.3 331 65.6
CsaV3_6G005130 Cucumis sativus L. HOM05D007327 ORTHO05D009342 6.9e-126 454.5 352 62.2
Lsat_1_v5_gn_1_6021 Lactuca sativa HOM05D007327 ORTHO05D009342 1.5e-125 453.4 351 59.3
Phvul.004G094900 Phaseolus vulgaris HOM05D007327 ORTHO05D009342 7.7e-125 451.1 352 66.2
Oeu051268.1 Olea europaea HOM05D007327 ORTHO05D009342 8.5e-124 447.6 385 57.9
QL02p039069 Quercus lobata HOM05D007327 ORTHO05D009342 1.4e-123 446.8 454 51.1
FAN15G0044 Fragaria x ananassa HOM05D007327 ORTHO05D009342 3.2e-123 445.7 418 54.1
FAN24G0347 Fragaria x ananassa HOM05D007327 ORTHO05D009342 4.2e-123 445.3 418 54.1
MELO3C029831.2 Cucumis melo HOM05D007327 ORTHO05D009342 5.5e-123 444.9 352 60.5
Solyc04g071470.3 Solanum lycopersicum HOM05D007327 ORTHO05D009342 1.6e-122 443.4 352 59.4
Lj2g0012645 Lotus japonicus HOM05D007327 ORTHO05D009342 7.9e-122 441.0 353 65.7
Sopen04g027430 Solanum pennellii HOM05D007327 ORTHO05D009342 7.9e-122 441.0 352 59.4
Psat1g101680 Pisum sativum HOM05D007327 ORTHO05D009342 5.1e-121 438.3 352 60.2
PSO541G6301 Papaver somniferum HOM05D007327 ORTHO05D009342 2.0e-120 436.4 358 58.7
TPR.G31184 Trifolium pratense HOM05D007327 ORTHO05D009342 2.0e-120 436.4 353 61.2
ATR0582G033 Amborella trichopoda HOM05D007327 ORTHO05D009342 2.4e-118 429.5 352 58.0
SGA_v2.0_scaffold24G10336 Striga asiatica HOM05D007327 ORTHO05D009342 4.5e-117 425.2 364 58.2
Nitab4.5_0002452g0030 Nicotiana tabacum HOM05D007327 ORTHO05D009342 7.7e-117 424.5 365 56.4
HPP92_000065 Vanilla planifolia HOM05D007327 ORTHO05D009342 1.3e-116 423.7 353 58.1
Medtr6g036750 Medicago truncatula HOM05D007327 ORTHO05D009342 3.8e-116 422.2 352 58.5
Os01g0867200 Oryza sativa ssp. japonica HOM05D007327 ORTHO05D009342 1.0e-113 414.1 352 55.7
Aqoxy6G00379 Aquilegia oxysepala HOM05D007327 ORTHO05D009342 5.1e-113 411.8 321 60.4
Zm00001eb146700 Zea mays HOM05D007327 ORTHO05D009342 6.3e-111 404.8 362 55.0
Hund26695 Selenicereus undatus HOM05D007327 ORTHO05D009342 1.1e-107 394.0 342 57.9
PSO675G1203 Papaver somniferum HOM05D007327 ORTHO05D009342 4.7e-106 388.7 360 53.9
Haze_17755 Corylus avellana HOM05D007327 ORTHO05D009342 8.0e-106 387.9 502 44.6
Cc10_g14850 Coffea canephora HOM05D007327 ORTHO05D009342 4.5e-101 372.1 287 64.1
ClCG08G007070 Citrullus lanatus HOM05D007327 ORTHO05D009342 4.2e-99 365.5 468 45.1
unitig_26.g9897 Utricularia gibba HOM05D007327 ORTHO05D009342 4.9e-79 298.9 283 53.7
Glyma.16G166900 Glycine max HOM05D007327 ORTHO05D009342 6.2e-74 282.0 192 68.8
SMO335G0004 Selaginella moellendorffii HOM05D007327 ORTHO05D009342 4.9e-71 272.3 368 41.0
Pp3c20_20940 Physcomitrium patens HOM05D007327 ORTHO05D009342 6.4e-71 271.9 358 39.7
Sabra02G0053500 Salix brachista HOM05D007327 ORTHO05D009342 6.4e-71 271.9 232 58.2
VMungo0464G2010 Vigna mungo HOM05D007327 ORTHO05D009342 1.4e-65 254.2 216 58.8
Ca_25918_v3 Cicer arietinum L. HOM05D007327 ORTHO05D009342 1.8e-65 253.8 189 63.0
SalBow7G2928 Salvia bowleyana HOM05D007327 ORTHO05D009342 2.0e-64 250.4 325 45.2
SHI09061 Sapria himalayana HOM05D007327 ORTHO05D009342 1.8e-57 227.3 253 49.4
Cc00_g31580 Coffea canephora HOM05D007327 ORTHO05D009342 1.2e-53 214.5 141 70.2
DCAR_010093 Daucus carota HOM05D007327 ORTHO05D009342 3.5e-53 213.0 163 61.3
Cpa.g.sc21.198 Carica papaya HOM05D007327 ORTHO05D009342 2.5e-51 206.8 160 71.2
AagrBONN_evm.TU.Sc2ySwM_344.2825 Anthoceros agrestis HOM05D007327 ORTHO05D009342 6.2e-50 202.2 231 45.0
Migut.C00996 Erythranthe guttata HOM05D007327 ORTHO05D009342 3.1e-49 199.9 147 59.9
SMO228G0199 Selaginella moellendorffii HOM05D007327 ORTHO05D009342 6.9e-49 198.7 345 35.7
Cpa.g.c33136.2 Carica papaya HOM05D007327 ORTHO05D009342 3.9e-44 183.0 106 80.2
MCO03G524 Micromonas commoda HOM05D007327 ORTHO05D009342 5.3e-33 146.0 426 27.2
Glyma.16G166950 Glycine max HOM05D007327 ORTHO05D009342 7.1e-30 135.6 108 63.0
SalBow7G1135 Salvia bowleyana HOM05D007327 ORTHO05D009342 6.0e-29 132.5 103 66.0
MBI17_g25900_MAGBIO Magnolia biondii HOM05D007327 ORTHO05D009342 1.8e-28 131.0 102 60.8
SEGI_20996 Sequoiadendron giganteum HOM05D007327 ORTHO05D009342 1.5e-27 127.9 105 55.2
MBI17_g33124_MAGBIO Magnolia biondii HOM05D007327 ORTHO05D009342 2.1e-26 124.0 113 54.9
PRCOL_00001255 Prasinoderma coloniale HOM05D007327 ORTHO05D009342 1.4e-25 121.3 396 28.0
CSS0013095 Camellia sinensis var. sinensis HOM05D007327 ORTHO05D009342 4.9e-23 112.8 68 77.9
CSS0009897 Camellia sinensis var. sinensis HOM05D007327 ORTHO05D009342 6.5e-23 112.5 68 76.5
CSS0040121 Camellia sinensis var. sinensis HOM05D007327 ORTHO05D009342 1.9e-22 110.9 68 76.5
CSS0048751 Camellia sinensis var. sinensis HOM05D007327 ORTHO05D009342 5.5e-22 109.4 68 76.5
SEGI_01400 Sequoiadendron giganteum HOM05D007327 ORTHO05D009342 6.7e-20 102.4 104 46.2
PSO541G3507 Papaver somniferum HOM05D000022 ORTHO05D000071 8.7e-20 102.1 55 80.0
HPP92_000064 Vanilla planifolia HOM05D007327 ORTHO05D009342 2.5e-19 100.5 75 61.3
MBI17_g33117_MAGBIO Magnolia biondii HOM05D007327 ORTHO05D009342 4.8e-18 96.3 51 74.5
Cc07_g11820 Coffea canephora HOM05D007327 ORTHO05D009342 3.1e-17 93.6 49 71.4
Cc10_g14400 Coffea canephora HOM05D007327 ORTHO05D009342 3.1e-17 93.6 49 71.4
CSS0014849 Camellia sinensis var. sinensis HOM05D007327 ORTHO05D009342 1.2e-16 91.7 89 56.2
MBI09_g12042_MAGBIO Magnolia biondii HOM05D007327 ORTHO05D009342 1.2e-16 91.7 64 62.5
CDE02G1931 Ceratophyllum demersum HOM05D007327 ORTHO05D009342 7.6e-16 89.0 50 74.0
MBI17_g33120_MAGBIO Magnolia biondii HOM05D007327 ORTHO05D009342 7.2e-14 82.4 94 42.6
SEGI_01531 Sequoiadendron giganteum HOM05D007327 ORTHO05D009342 3.6e-13 80.1 54 61.1
Actinidia27255 Actinidia chinensis HOM05D007327 ORTHO05D009342 4.3e-11 73.2 164 34.8
Cre12.g548350 Chlamydomonas reinhardtii HOM05D007327 ORTHO05D009342 7.4e-11 72.4 162 30.9
arahy.Tifrunner.gnm1.ann1.B7BSQF Arachis hypogaea HOM05D000002 ORTHO05D000047 4.1e-09 66.6 180 29.4
arahy.Tifrunner.gnm1.ann1.KIIE1S Arachis hypogaea HOM05D000198 ORTHO05D003365 7.7e-08 62.4 58 55.2


User provided reference genes

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