Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGR044G2401 Punica granatum HOM05D000358 ORTHO05D009346 4.1e-91 338.2 190 100.0
Eucgr.K03368 Eucalyptus grandis HOM05D000358 ORTHO05D009346 7.6e-53 211.1 173 66.5
Manes.05G077400 Manihot esculenta HOM05D000358 ORTHO05D009346 7.3e-48 194.5 154 66.9
CANSAT25G1780 Cannabis sativa HOM05D000358 ORTHO05D009346 1.3e-47 193.7 159 63.5
Sabra05G0160900 Salix brachista HOM05D000358 ORTHO05D009346 1.3e-47 193.7 123 77.2
TAR375G0394 Trochodendron aralioides HOM05D000358 ORTHO05D009346 2.1e-47 193.0 117 76.1
MBI04_g20822_MAGBIO Magnolia biondii HOM05D000358 ORTHO05D009346 1.2e-45 187.2 114 73.7
TAR636G2394 Trochodendron aralioides HOM05D000358 ORTHO05D009346 2.6e-45 186.0 117 72.6
Ciclev10022514m.g Citrus clementina HOM05D000358 ORTHO05D009346 3.4e-45 185.7 123 69.9
TWI14G1410 Tripterygium wilfordii HOM05D000358 ORTHO05D009346 5.8e-45 184.9 129 69.8
Atru.chr5.1460 Acer truncatum HOM05D000358 ORTHO05D009346 7.6e-45 184.5 167 57.5
Thecc.01G276900 Theobroma cacao HOM05D000358 ORTHO05D009346 9.9e-45 184.1 123 69.1
FvH4_2g23371 Fragaria vesca HOM05D000358 ORTHO05D009346 2.9e-44 182.6 130 69.2
Dinv32921 Davidia involucrata HOM05D000358 ORTHO05D002525 3.8e-44 182.2 127 71.7
Duzib133G0337 Durio zibethinus HOM05D000358 ORTHO05D009346 3.8e-44 182.2 123 69.9
CSS0040373 Camellia sinensis var. sinensis HOM05D000358 ORTHO05D009346 4.9e-44 181.8 119 68.9
Prupe.8G239600 Prunus persica HOM05D000358 ORTHO05D009346 6.4e-44 181.4 130 69.2
Gohir.A11G123500 Gossypium hirsutum HOM05D000358 ORTHO05D009346 1.1e-43 180.6 134 66.4
MSTRG.12558 Avicennia marina HOM05D000358 ORTHO05D009346 2.4e-43 179.5 120 67.5
RcHm_v2.0_Chr6g0290831 Rosa chinensis HOM05D000358 ORTHO05D009346 2.4e-43 179.5 130 68.5
Aqoxy2G03373 Aquilegia oxysepala HOM05D000358 ORTHO05D009346 4.2e-43 178.7 115 68.7
MD11G1284000 Malus domestica HOM05D000358 ORTHO05D009346 4.2e-43 178.7 171 57.9
Gorai.007G137700 Gossypium raimondii HOM05D000358 ORTHO05D009346 5.5e-43 178.3 133 66.2
Cpa.g.sc52.51 Carica papaya HOM05D000358 ORTHO05D009346 7.1e-43 177.9 119 71.4
GSVIVG01001163001 Vitis vinifera HOM05D000358 ORTHO05D009346 1.2e-42 177.2 158 57.6
CsaV3_6G037210 Cucumis sativus L. HOM05D000358 ORTHO05D009346 4.6e-42 175.3 120 68.3
Gohir.D11G128700 Gossypium hirsutum HOM05D000358 ORTHO05D009346 4.6e-42 175.3 133 65.4
arahy.Tifrunner.gnm1.ann1.1D6AAZ Arachis hypogaea HOM05D000358 ORTHO05D009346 6.0e-42 174.9 127 66.1
arahy.Tifrunner.gnm1.ann1.M7C8NM Arachis hypogaea HOM05D000358 ORTHO05D009346 6.0e-42 174.9 127 66.1
Nitab4.5_0004318g0030 Nicotiana tabacum HOM05D000358 ORTHO05D009346 6.0e-42 174.9 131 60.3
Rhsim13G0026100 Rhododendron simsii HOM05D000358 ORTHO05D009346 6.0e-42 174.9 106 74.5
Glyma.03G155200 Glycine max HOM05D000358 ORTHO05D009346 1.0e-41 174.1 120 70.0
Lj1A47T39 Lonicera japonica HOM05D000358 ORTHO05D009346 1.3e-41 173.7 112 73.2
Nitab4.5_0005971g0010 Nicotiana tabacum HOM05D000358 ORTHO05D009346 1.3e-41 173.7 131 59.5
EL10Ac5g10557 Beta vulgaris HOM05D000358 ORTHO05D009346 2.3e-41 172.9 116 67.2
CiPaw.07G090600 Carya illinoinensis HOM05D000358 ORTHO05D009346 2.3e-41 172.9 115 73.0
SGA_v2.0_scaffold81G26022 Striga asiatica HOM05D000358 ORTHO05D009346 3.0e-41 172.6 114 67.5
Peaxi162Scf00641g00315 Petunia axillaris HOM05D000358 ORTHO05D009346 6.7e-41 171.4 115 69.6
SalBow6G4489 Salvia bowleyana HOM05D000358 ORTHO05D009346 6.7e-41 171.4 110 70.9
Sed0015724 Sechium edule HOM05D000358 ORTHO05D009346 6.7e-41 171.4 119 68.1
Migut.N02045 Erythranthe guttata HOM05D000358 ORTHO05D009346 8.7e-41 171.0 124 62.9
Actinidia09124 Actinidia chinensis HOM05D000358 ORTHO05D009346 1.5e-40 170.2 106 71.7
Hund09500 Selenicereus undatus HOM05D000358 ORTHO05D009346 1.9e-40 169.9 114 68.4
HanXRQChr15g0466741 Helianthus annuus HOM05D000358 ORTHO05D009346 2.5e-40 169.5 117 67.5
Potri.005G210700 Populus trichocarpa HOM05D000358 ORTHO05D009346 4.3e-40 168.7 129 68.2
ECA247G2961 Erigeron canadensis HOM05D000358 ORTHO05D009346 5.6e-40 168.3 118 66.1
Lsat_1_v5_gn_9_3480 Lactuca sativa HOM05D000358 ORTHO05D009346 5.6e-40 168.3 119 66.4
THA.LOC104801239 Tarenaya hassleriana HOM05D000358 ORTHO05D009346 5.6e-40 168.3 160 52.5
AUR62028609 Chenopodium quinoa HOM05D000358 ORTHO05D009346 7.4e-40 167.9 116 68.1
Cc01_g19380 Coffea canephora HOM05D000358 ORTHO05D009346 7.4e-40 167.9 117 70.1
PSO761G0166 Papaver somniferum HOM05D000358 ORTHO05D009346 7.4e-40 167.9 111 67.6
Sopen09g027050 Solanum pennellii HOM05D000358 ORTHO05D009346 9.6e-40 167.5 131 62.6
Lj1g0011093 Lotus japonicus HOM05D000358 ORTHO05D009346 1.6e-39 166.8 117 67.5
Phvul.001G152500 Phaseolus vulgaris HOM05D000358 ORTHO05D009346 1.6e-39 166.8 115 68.7
PSO210G0760 Papaver somniferum HOM05D000358 ORTHO05D009346 2.1e-39 166.4 111 66.7
TPR.G35683 Trifolium pratense HOM05D000358 ORTHO05D009346 4.8e-39 165.2 118 68.6
Medtr7g095090 Medicago truncatula HOM05D000358 ORTHO05D009346 6.2e-39 164.9 161 56.5
Zm00001eb054110 Zea mays HOM05D000358 ORTHO05D009346 6.2e-39 164.9 107 69.2
Thhalv10029025m.g Eutrema salsugineum HOM05D000358 ORTHO05D009346 1.8e-38 163.3 120 65.0
CARHR251060 Cardamine hirsuta HOM05D000358 ORTHO05D009346 6.9e-38 161.4 119 66.4
Carub.0006s3438 Capsella rubella HOM05D000358 ORTHO05D009346 3.4e-37 159.1 119 64.7
Sp6g02670 Schrenkiella parvula HOM05D000358 ORTHO05D009346 1.0e-36 157.5 120 63.3
AL6G50280 Arabidopsis lyrata HOM05D000358 ORTHO05D009346 2.2e-36 156.4 119 63.9
AT4G02725 Arabidopsis thaliana HOM05D000358 ORTHO05D009346 2.9e-36 156.0 116 64.7
BcaC03g16171 Brassica carinata HOM05D000358 ORTHO05D009346 3.8e-36 155.6 117 63.2
C02p39090 Brassica napus HOM05D000358 ORTHO05D009346 3.8e-36 155.6 117 63.2
BolC2t09919H Brassica oleracea HOM05D000358 ORTHO05D009346 3.8e-36 155.6 117 63.2
BcaB05g23661 Brassica carinata HOM05D000358 ORTHO05D009346 4.9e-36 155.2 120 61.7
A02p24950 Brassica napus HOM05D000358 ORTHO05D009346 4.9e-36 155.2 117 63.2
BraA02t07485Z Brassica rapa HOM05D000358 ORTHO05D009346 4.9e-36 155.2 117 63.2
BolC9t53153H Brassica oleracea HOM05D000358 ORTHO05D009346 6.5e-36 154.8 111 64.9
BcaC04g24011 Brassica carinata HOM05D000358 ORTHO05D009346 8.4e-36 154.5 111 64.9
Os03g0701300 Oryza sativa ssp. japonica HOM05D000358 ORTHO05D009346 1.1e-35 154.1 100 68.0
Solyc09g065300.4 Solanum lycopersicum HOM05D000358 ORTHO05D009346 1.4e-35 153.7 162 51.2
HPP92_009591 Vanilla planifolia HOM05D002842 ORTHO05D003177 2.5e-35 152.9 124 57.3
BraA09t35864Z Brassica rapa HOM05D000358 ORTHO05D009346 2.1e-34 149.8 111 62.2
A09p02150 Brassica napus HOM05D000358 ORTHO05D009346 2.7e-34 149.4 108 63.9
Aa31LG5G2370 Aethionema arabicum HOM05D000358 ORTHO05D009346 1.0e-33 147.5 105 65.7
vmacro02584 Vaccinium macrocarpon HOM05D000358 ORTHO05D009346 1.8e-33 146.7 91 74.7
COL.COLO4_09074 Corchorus olitorius HOM05D000358 ORTHO05D009346 1.9e-32 143.3 142 54.2
Lalb_Chr01g0020121 Lupinus albus HOM05D000358 ORTHO05D009346 4.3e-32 142.1 98 66.3
C09p02250 Brassica napus HOM05D000358 ORTHO05D009346 1.6e-31 140.2 135 53.3
Pp3c26_14500 Physcomitrium patens HOM05D000358 ORTHO05D009346 6.3e-31 138.3 124 50.0
Hma1.2p1_0822F.1_g224410 Hydrangea macrophylla HOM05D000358 ORTHO05D009346 1.5e-29 133.7 91 68.1
Hma1.2p1_0822F.1_g224420 Hydrangea macrophylla HOM05D000358 ORTHO05D009346 1.5e-29 133.7 89 68.5
SMO340G0322 Selaginella moellendorffii HOM05D000104 ORTHO05D004059 1.5e-29 133.7 145 47.6
SMO180G0003 Selaginella moellendorffii HOM05D000358 ORTHO05D009346 2.0e-29 133.3 94 62.8
VMungo1383G1528 Vigna mungo HOM05D000358 ORTHO05D009346 4.5e-29 132.1 145 50.3
CDE02G2742 Ceratophyllum demersum HOM05D006420 ORTHO05D008009 7.6e-29 131.3 96 64.6
Mapoly0004s0031 Marchantia polymorpha HOM05D000358 ORTHO05D009346 1.7e-28 130.2 133 49.6
PGSC0003DMG400019331 Solanum tuberosum HOM05D000358 ORTHO05D009346 1.7e-28 130.2 103 62.1
Sc17g0001440 Simmondsia chinensis HOM05D000358 ORTHO05D009346 5.0e-28 128.6 90 70.0
Psat3g063840 Pisum sativum HOM05D000358 ORTHO05D009346 3.2e-27 125.9 93 66.7
Atru.BG.13.p Acer truncatum HOM05D000358 ORTHO05D009346 4.2e-27 125.6 95 67.4
Eucgr.L00778 Eucalyptus grandis HOM05D000358 ORTHO05D009346 5.5e-27 125.2 73 82.2
ATR0332G065 Amborella trichopoda HOM05D000358 ORTHO05D009346 9.3e-27 124.4 91 61.5
ClCG07G000330 Citrullus lanatus HOM05D000358 ORTHO05D009346 4.6e-26 122.1 148 48.6
Haze_04693 Corylus avellana HOM05D000358 ORTHO05D009346 7.9e-26 121.3 142 50.7
AagrBONN_evm.TU.Sc2ySwM_362.2722 Anthoceros agrestis HOM05D000358 ORTHO05D009346 7.7e-21 104.8 76 63.2
unitig_899.g15068 Utricularia gibba HOM05D000454 ORTHO05D000591 1.3e-20 104.0 75 62.7
Eucgr.C01960 Eucalyptus grandis HOM05D000358 ORTHO05D009346 5.0e-20 102.1 63 79.4
Ah.11g050550 Amaranthus hybridus HOM05D000358 ORTHO05D009346 1.3e-12 77.4 119 42.0
QL12p021343 Quercus lobata HOM05D000358 ORTHO05D009346 2.2e-12 76.6 91 48.4
Oeu029468.1 Olea europaea HOM05D000358 ORTHO05D009346 3.2e-11 72.8 97 46.4
MELO3C014393.2 Cucumis melo HOM05D000358 ORTHO05D009346 6.1e-10 68.6 36 80.6
Nn1g02275 Nelumbo nucifera HOM05D000358 ORTHO05D009346 6.1e-10 68.6 59 61.0
FAN20G1711 Fragaria x ananassa HOM05D000358 ORTHO05D009346 4.4e-08 62.4 130 34.6


User provided reference genes

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