Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGR044G2364 Punica granatum HOM05D005675 ORTHO05D006884 6.1e-211 737.3 381 100.0
Eucgr.C02170 Eucalyptus grandis HOM05D005675 ORTHO05D006884 1.7e-104 383.6 348 58.3
CiPaw.16G104100 Carya illinoinensis HOM05D005675 ORTHO05D006884 1.8e-98 363.6 358 56.7
QL11p008661 Quercus lobata HOM05D005675 ORTHO05D006884 7.7e-97 358.2 351 57.5
RcHm_v2.0_Chr2g0128761 Rosa chinensis HOM05D005675 ORTHO05D006884 1.5e-95 354.0 348 56.6
MD07G1305000 Malus domestica HOM05D005675 ORTHO05D006884 2.5e-95 353.2 364 55.5
GSVIVG01000235001 Vitis vinifera HOM05D005675 ORTHO05D006884 7.2e-95 351.7 351 54.7
Dinv26452 Davidia involucrata HOM05D005675 ORTHO05D006884 6.1e-94 348.6 342 56.7
Prupe.4G276600 Prunus persica HOM05D005675 ORTHO05D006884 6.1e-94 348.6 386 52.3
Cfa020754 Carpinus fangiana HOM05D005675 ORTHO05D006884 4.4e-92 342.4 355 53.8
FAN09G4269 Fragaria x ananassa HOM05D005675 ORTHO05D006884 2.2e-91 340.1 367 52.6
FAN14G0585 Fragaria x ananassa HOM05D005675 ORTHO05D006884 1.1e-90 337.8 369 52.3
Manes.01G177400 Manihot esculenta HOM05D005675 ORTHO05D006884 1.8e-90 337.0 362 52.5
Dinv25398 Davidia involucrata HOM05D005675 ORTHO05D006884 4.5e-89 332.4 355 53.0
FAN05G3686 Fragaria x ananassa HOM05D005675 ORTHO05D006884 3.8e-88 329.3 383 50.1
Gorai.004G024100 Gossypium raimondii HOM05D005675 ORTHO05D006884 1.1e-87 327.8 344 52.0
Gohir.D08G027200 Gossypium hirsutum HOM05D005675 ORTHO05D006884 1.9e-87 327.0 344 52.0
Hma1.2p1_0661F.1_g198030 Hydrangea macrophylla HOM05D005675 ORTHO05D006884 4.2e-87 325.9 345 53.6
Gohir.A08G016800 Gossypium hirsutum HOM05D005675 ORTHO05D006884 5.5e-87 325.5 344 51.7
Ciclev10008766m.g Citrus clementina HOM05D005675 ORTHO05D006884 9.4e-87 324.7 340 53.5
Cc00_g00090 Coffea canephora HOM05D005675 ORTHO05D006884 4.7e-86 322.4 343 50.1
COL.COLO4_23415 Corchorus olitorius HOM05D005675 ORTHO05D006884 1.0e-85 321.2 342 52.6
Potri.006G078700 Populus trichocarpa HOM05D005675 ORTHO05D006884 1.0e-85 321.2 347 50.1
TWI63G1173 Tripterygium wilfordii HOM05D005675 ORTHO05D006884 1.2e-84 317.8 346 51.7
TAR626G0076 Trochodendron aralioides HOM05D005675 ORTHO05D006884 2.0e-84 317.0 348 54.6
CSS0039496 Camellia sinensis var. sinensis HOM05D005675 ORTHO05D006884 7.5e-84 315.1 363 51.0
Duzib168G1643 Durio zibethinus HOM05D005675 ORTHO05D006884 7.5e-84 315.1 344 50.9
Sabra06G0059600 Salix brachista HOM05D005675 ORTHO05D006884 3.7e-83 312.8 345 49.6
Solyc07g017290.4 Solanum lycopersicum HOM05D005675 ORTHO05D006884 3.7e-83 312.8 335 52.2
Actinidia02470 Actinidia chinensis HOM05D005675 ORTHO05D006884 6.3e-83 312.0 340 52.1
Sopen07g006010 Solanum pennellii HOM05D005675 ORTHO05D006884 1.8e-82 310.5 335 51.9
Lj1g0011117 Lotus japonicus HOM05D005675 ORTHO05D006884 2.4e-82 310.1 351 50.4
CAN.G1751.7 Capsicum annuum HOM05D005675 ORTHO05D006884 2.9e-80 303.1 347 50.7
Cpa.g.sc115.21 Carica papaya HOM05D005675 ORTHO05D006884 5.0e-80 302.4 348 52.9
Thecc.09G196800 Theobroma cacao HOM05D005675 ORTHO05D006884 1.5e-79 300.8 326 52.1
DCAR_009047 Daucus carota HOM05D005675 ORTHO05D006884 3.3e-79 299.7 338 48.2
Solyc12g017470.2 Solanum lycopersicum HOM05D005675 ORTHO05D006884 3.3e-79 299.7 342 50.3
PSO063G5127 Papaver somniferum HOM05D005675 ORTHO05D006884 4.7e-78 295.8 346 49.1
Ca_25634_v3 Cicer arietinum L. HOM05D005675 ORTHO05D001317 2.3e-77 293.5 345 48.4
Medtr6g093070 Medicago truncatula HOM05D005675 ORTHO05D006884 3.0e-77 293.1 342 47.1
MSTRG.26518 Avicennia marina HOM05D005675 ORTHO05D006884 1.2e-76 291.2 352 47.4
TWI34G2031 Tripterygium wilfordii HOM05D005675 ORTHO05D006884 1.2e-76 291.2 344 49.4
CANSAT80G1422 Cannabis sativa HOM05D005675 ORTHO05D006884 1.5e-76 290.8 345 47.2
vmacro20762 Vaccinium macrocarpon HOM05D005675 ORTHO05D006884 2.0e-76 290.4 389 45.8
TPR.G21343 Trifolium pratense HOM05D005675 ORTHO05D006884 5.7e-76 288.9 344 48.8
THA.LOC104815311 Tarenaya hassleriana HOM05D005675 ORTHO05D006884 2.8e-75 286.6 343 46.6
PSO170G1351 Papaver somniferum HOM05D005675 ORTHO05D006884 8.3e-75 285.0 345 48.7
Rhsim01G0109900 Rhododendron simsii HOM05D005675 ORTHO05D006884 5.4e-74 282.3 323 49.8
Nitab4.5_0014696g0010 Nicotiana tabacum HOM05D005675 ORTHO05D006884 9.2e-74 281.6 348 49.1
Lalb_Chr14g0362531 Lupinus albus HOM05D005675 ORTHO05D006884 1.0e-72 278.1 341 45.5
Glyma.01G001700 Glycine max HOM05D005675 ORTHO05D006884 5.0e-72 275.8 344 46.5
ECA240G2624 Erigeron canadensis HOM05D005675 ORTHO05D006884 1.5e-71 274.2 350 46.6
Migut.L01917 Erythranthe guttata HOM05D005675 ORTHO05D006884 2.5e-71 273.5 345 46.4
ClCG05G011260 Citrullus lanatus HOM05D005675 ORTHO05D006884 1.6e-70 270.8 344 46.8
Sed0020807 Sechium edule HOM05D005675 ORTHO05D006884 1.0e-69 268.1 344 47.4
Aa31LG3G3440 Aethionema arabicum HOM05D005675 ORTHO05D006884 1.8e-69 267.3 343 46.1
arahy.Tifrunner.gnm1.ann1.RL68NL Arachis hypogaea HOM05D005675 ORTHO05D006884 2.3e-69 266.9 360 46.1
VMungo0464G1932 Vigna mungo HOM05D005675 ORTHO05D001317 2.3e-69 266.9 369 44.4
SalBow5G0607 Salvia bowleyana HOM05D005675 ORTHO05D006884 3.1e-69 266.5 360 44.7
HanXRQChr03g0067281 Helianthus annuus HOM05D005675 ORTHO05D006884 4.0e-69 266.2 359 43.5
Lsat_1_v5_gn_7_57460 Lactuca sativa HOM05D005675 ORTHO05D006884 4.0e-69 266.2 370 43.5
AT3G10572 Arabidopsis thaliana HOM05D005675 ORTHO05D006884 1.5e-68 264.2 343 46.6
BraA03t12828Z Brassica rapa HOM05D005675 ORTHO05D006884 2.0e-68 263.8 352 45.7
AL3G22010 Arabidopsis lyrata HOM05D005675 ORTHO05D006884 2.6e-68 263.5 353 45.6
BcaC01g04171 Brassica carinata HOM05D005675 ORTHO05D006884 4.4e-68 262.7 350 46.0
Phvul.004G178000 Phaseolus vulgaris HOM05D005675 ORTHO05D006884 9.8e-68 261.5 351 45.6
A03p36640 Brassica napus HOM05D005675 ORTHO05D006884 1.7e-67 260.8 352 44.3
MBI13_g31573_MAGBIO Magnolia biondii HOM05D005675 ORTHO05D006884 1.7e-67 260.8 388 43.3
AL3G45830 Arabidopsis lyrata HOM05D005675 ORTHO05D006884 2.2e-67 260.4 342 45.6
BolC5t34404H Brassica oleracea HOM05D005675 ORTHO05D006884 2.2e-67 260.4 339 46.9
C05p57470 Brassica napus HOM05D005675 ORTHO05D006884 2.9e-67 260.0 339 46.9
BcaC05g29447 Brassica carinata HOM05D005675 ORTHO05D006884 2.4e-66 256.9 343 46.1
Sp3g08870 Schrenkiella parvula HOM05D005675 ORTHO05D006884 7.0e-66 255.4 340 45.3
Carub.0003s0981 Capsella rubella HOM05D005675 ORTHO05D006884 2.0e-65 253.8 339 45.1
BraA05t22649Z Brassica rapa HOM05D005675 ORTHO05D006884 2.7e-65 253.4 344 46.5
A05p38580 Brassica napus HOM05D005675 ORTHO05D006884 3.5e-65 253.1 355 45.1
CsaV3_3G021160 Cucumis sativus L. HOM05D005675 ORTHO05D006884 6.0e-65 252.3 348 45.4
SGA_v2.0_scaffold21G09606 Striga asiatica HOM05D005675 ORTHO05D006884 7.8e-65 251.9 359 43.5
Haze_19098 Corylus avellana HOM05D005675 ORTHO05D006884 1.3e-64 251.1 376 44.4
PGSC0003DMG400006457 Solanum tuberosum HOM05D005675 ORTHO05D006884 1.7e-64 250.8 306 47.4
BolC3t16698H Brassica oleracea HOM05D005675 ORTHO05D006884 3.9e-64 249.6 350 44.6
Thhalv10021093m.g Eutrema salsugineum HOM05D005675 ORTHO05D006884 6.6e-64 248.8 340 44.1
CAN.G1751.9 Capsicum annuum HOM05D005675 ORTHO05D006884 1.1e-63 248.1 313 47.0
SGA_v2.0_scaffold339G49254 Striga asiatica HOM05D005675 ORTHO05D006884 2.5e-63 246.9 353 42.8
Prupe.3G126100 Prunus persica HOM05D005675 ORTHO05D006884 7.3e-63 245.4 348 46.6
Atru.chr2.1389 Acer truncatum HOM05D005675 ORTHO05D006884 6.2e-62 242.3 338 45.6
MELO3C020255.2 Cucumis melo HOM05D005675 ORTHO05D006884 6.2e-62 242.3 327 45.9
FvH4_6g26940 Fragaria vesca HOM05D005675 ORTHO05D006884 2.3e-61 240.4 253 53.4
CAN.G309.91 Capsicum annuum HOM05D005675 ORTHO05D006884 2.6e-60 236.9 279 50.2
FAN02G0472 Fragaria x ananassa HOM05D005675 ORTHO05D006884 5.8e-60 235.7 275 48.7
Oeu036952.2 Olea europaea HOM05D005675 ORTHO05D006884 2.2e-59 233.8 448 36.4
HPP92_010804 Vanilla planifolia HOM05D005675 ORTHO05D006884 2.2e-59 233.8 349 40.7
AUR62002223 Chenopodium quinoa HOM05D005675 ORTHO05D006884 7.8e-57 225.3 347 40.9
Ah.06g185690 Amaranthus hybridus HOM05D005675 ORTHO05D006884 5.1e-56 222.6 341 40.8
CAN.G486.3 Capsicum annuum HOM05D002496 ORTHO05D002787 3.3e-55 219.9 267 48.7
SHI13641 Sapria himalayana HOM05D005675 ORTHO05D006884 4.7e-54 216.1 369 39.8
AUR62015436 Chenopodium quinoa HOM05D005675 ORTHO05D006884 5.2e-53 212.6 371 38.5
ATR0626G294 Amborella trichopoda HOM05D005675 ORTHO05D006884 4.4e-52 209.5 391 37.3
Aqoxy6G03025 Aquilegia oxysepala HOM05D005675 ORTHO05D006884 4.1e-50 203.0 311 39.2
CDE05G2328 Ceratophyllum demersum HOM05D005675 ORTHO05D006884 7.1e-50 202.2 352 36.9
Hund11839 Selenicereus undatus HOM05D005675 ORTHO05D006884 3.5e-49 199.9 339 37.5
Nn8g41130 Nelumbo nucifera HOM05D005675 ORTHO05D006884 1.7e-48 197.6 194 54.1
Os06g0702800 Oryza sativa ssp. japonica HOM05D005675 ORTHO05D006884 3.0e-48 196.8 361 36.6
CSS0020115 Camellia sinensis var. sinensis HOM05D005675 ORTHO05D006884 3.9e-48 196.4 201 53.7
Sc26g0001420 Simmondsia chinensis HOM05D005675 ORTHO05D006884 8.6e-48 195.3 315 41.0
Sopen12g008260 Solanum pennellii HOM05D005675 ORTHO05D006884 7.3e-47 192.2 198 53.0
Zm00001eb227160 Zea mays HOM05D005675 ORTHO05D006884 2.4e-45 187.2 298 40.3
C03p44280 Brassica napus HOM05D005675 ORTHO05D006884 3.1e-45 186.8 349 37.8
Nitab4.5_0000899g0040 Nicotiana tabacum HOM05D005675 ORTHO05D006884 7.6e-44 182.2 193 52.8
TAR383G0085 Trochodendron aralioides HOM05D005675 ORTHO05D006884 1.7e-43 181.0 273 41.8
Glyma.07G130600 Glycine max HOM05D005675 ORTHO05D006884 5.4e-42 176.0 277 40.8
EL10Ac3g05860 Beta vulgaris HOM05D005675 ORTHO05D006884 1.6e-41 174.5 322 38.5
Lju432C7G1 Lonicera japonica HOM05D005675 ORTHO05D006884 2.7e-41 173.7 196 51.0
unitig_578.g16399 Utricularia gibba HOM05D005675 ORTHO05D006884 9.0e-37 158.7 209 46.4
CARHR085110 Cardamine hirsuta HOM05D005675 ORTHO05D006884 1.5e-36 157.9 248 40.3
PSO170G0789 Papaver somniferum HOM05D005675 ORTHO05D006884 2.1e-33 147.5 262 40.5
PSO170G4889 Papaver somniferum HOM05D005675 ORTHO05D006884 2.1e-33 147.5 262 40.5
PSO170G5374 Papaver somniferum HOM05D005675 ORTHO05D006884 2.1e-33 147.5 262 40.5
Peaxi162Scf01527g00006 Petunia axillaris HOM05D005675 ORTHO05D006884 4.6e-33 146.4 218 43.6
SEGI_03452 Sequoiadendron giganteum HOM05D005675 ORTHO05D006884 8.7e-32 142.1 286 33.6
PSO431G0001 Papaver somniferum HOM05D005675 ORTHO05D006884 7.3e-31 139.0 223 42.2
PSO170G3345 Papaver somniferum HOM05D005675 ORTHO05D006884 4.8e-30 136.3 251 39.4
PGSC0003DMG400009563 Solanum tuberosum HOM05D005675 ORTHO05D006884 1.8e-29 134.4 174 47.1
Haze_19095 Corylus avellana HOM05D005675 ORTHO05D006884 4.9e-27 126.3 120 54.2
Pp3c9_5270 Physcomitrium patens HOM05D005675 ORTHO05D006884 2.3e-24 117.5 423 27.9
Mapoly0082s0059 Marchantia polymorpha HOM05D005675 ORTHO05D006884 6.7e-24 115.9 424 26.4
CAN.G1703.6 Capsicum annuum HOM05D002496 ORTHO05D002787 1.4e-21 108.2 116 54.3
CAN.G2070.2 Capsicum annuum HOM05D005675 ORTHO05D006884 4.5e-20 103.2 155 40.6
SMO367G0141 Selaginella moellendorffii HOM05D005675 ORTHO05D006884 1.7e-19 101.3 220 34.1
unitig_578.g16398 Utricularia gibba HOM05D005675 ORTHO05D006884 1.9e-18 97.8 93 49.5
CARHR085100 Cardamine hirsuta HOM05D005675 ORTHO05D006884 5.5e-18 96.3 94 55.3
Sopen12g008240 Solanum pennellii HOM05D005675 ORTHO05D006884 2.3e-16 90.9 90 50.0
Gohir.D08G027550 Gossypium hirsutum HOM05D005675 ORTHO05D006884 4.8e-14 83.2 64 57.8
Gorai.004G024600 Gossypium raimondii HOM05D005675 ORTHO05D006884 2.6e-12 77.4 64 54.7
AagrBONN_evm.TU.Sc2ySwM_228.2452 Anthoceros agrestis HOM05D034800 ORTHO05D006884 7.6e-12 75.9 193 28.0
AagrBONN_evm.TU.Sc2ySwM_344.4450 Anthoceros agrestis HOM05D034800 ORTHO05D006884 1.9e-10 71.2 395 22.8
CSS0044900 Camellia sinensis var. sinensis HOM05D005675 ORTHO05D006884 3.3e-07 60.5 66 53.0
BcaB04g18591 Brassica carinata HOM05D000144 ORTHO05D006884 4.3e-07 60.1 149 31.5
Sopen00g008260 Solanum pennellii HOM05D005675 ORTHO05D006884 7.4e-07 59.3 41 70.7


User provided reference genes

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