Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGR044G2245 Punica granatum HOM05D007019 ORTHO05D008398 1.3e-269 932.6 500 100.0
Eucgr.C04032 Eucalyptus grandis HOM05D007019 ORTHO05D008398 1.1e-191 673.7 501 73.7
Manes.16G132200 Manihot esculenta HOM05D007019 ORTHO05D008398 4.4e-185 651.7 500 69.8
CiPaw.07G232900 Carya illinoinensis HOM05D007019 ORTHO05D008398 1.5e-180 636.7 500 70.0
Cfa013011 Carpinus fangiana HOM05D007019 ORTHO05D008398 3.3e-180 635.6 505 70.9
Potri.018G016200 Populus trichocarpa HOM05D007019 ORTHO05D008398 3.3e-180 635.6 502 68.9
Gorai.009G064200 Gossypium raimondii HOM05D007019 ORTHO05D008398 5.6e-180 634.8 502 69.5
Atru.chr7.2574 Acer truncatum HOM05D007019 ORTHO05D008398 1.2e-177 627.1 503 68.2
TWI32G0429 Tripterygium wilfordii HOM05D007019 ORTHO05D008398 5.8e-177 624.8 501 67.9
Hma1.2p1_0737F.1_g210790 Hydrangea macrophylla HOM05D007019 ORTHO05D008398 1.3e-176 623.6 505 68.9
Thecc.09G013400 Theobroma cacao HOM05D007019 ORTHO05D008398 1.1e-175 620.5 504 69.0
Lj6g0025581 Lotus japonicus HOM05D007019 ORTHO05D008398 3.2e-175 619.0 500 67.2
Prupe.1G396900 Prunus persica HOM05D007019 ORTHO05D008398 9.2e-175 617.5 505 68.7
Duzib168G1437 Durio zibethinus HOM05D007019 ORTHO05D008398 3.5e-174 615.5 505 68.1
FvH4_2g41350 Fragaria vesca HOM05D007019 ORTHO05D008398 3.5e-174 615.5 500 67.6
arahy.Tifrunner.gnm1.ann1.MG10WM Arachis hypogaea HOM05D007019 ORTHO05D008398 1.9e-172 609.8 499 66.7
CSS0016918 Camellia sinensis var. sinensis HOM05D007019 ORTHO05D008398 2.5e-172 609.4 501 68.1
CSS0023374 Camellia sinensis var. sinensis HOM05D007019 ORTHO05D008398 2.5e-172 609.4 501 68.1
Gohir.D05G063200 Gossypium hirsutum HOM05D007019 ORTHO05D008398 5.6e-172 608.2 502 67.5
QL02p018053 Quercus lobata HOM05D007019 ORTHO05D008398 7.3e-172 607.8 499 68.5
Lalb_Chr15g0081591 Lupinus albus HOM05D007019 ORTHO05D008398 1.6e-171 606.7 500 67.0
arahy.Tifrunner.gnm1.ann1.SS16UG Arachis hypogaea HOM05D007019 ORTHO05D008398 6.2e-171 604.7 499 66.3
Cc00_g05220 Coffea canephora HOM05D007019 ORTHO05D008398 4.0e-170 602.1 499 66.9
Gohir.A05G061000 Gossypium hirsutum HOM05D007019 ORTHO05D008398 5.3e-170 601.7 502 66.9
Glyma.18G091000 Glycine max HOM05D007019 ORTHO05D008398 1.5e-169 600.1 500 65.8
Actinidia14141 Actinidia chinensis HOM05D007019 ORTHO05D008398 1.3e-168 597.0 502 66.5
RcHm_v2.0_Chr6g0299181 Rosa chinensis HOM05D007019 ORTHO05D008398 1.3e-168 597.0 500 65.8
COL.COLO4_18972 Corchorus olitorius HOM05D007019 ORTHO05D008398 2.2e-168 596.3 504 66.9
Rhsim02G0217600 Rhododendron simsii HOM05D007019 ORTHO05D008398 6.4e-168 594.7 498 66.3
Lj7A737G40 Lonicera japonica HOM05D007019 ORTHO05D008398 1.1e-167 594.0 511 64.4
Glyma.08G321000 Glycine max HOM05D007019 ORTHO05D008398 9.3e-167 590.9 502 65.5
CANSAT25G0065 Cannabis sativa HOM05D007019 ORTHO05D008398 2.7e-166 589.3 505 63.6
FAN27G2994 Fragaria x ananassa HOM05D007019 ORTHO05D008398 6.0e-166 588.2 487 66.5
Ciclev10008089m.g Citrus clementina HOM05D007019 ORTHO05D008398 2.3e-165 586.3 503 66.2
Nn6g33490 Nelumbo nucifera HOM05D007019 ORTHO05D008398 6.6e-165 584.7 515 64.7
Psat5g174160 Pisum sativum HOM05D007019 ORTHO05D008398 1.1e-164 583.9 501 63.5
ClCG08G013800 Citrullus lanatus HOM05D007019 ORTHO05D008398 2.5e-164 582.8 501 64.5
MSTRG.1627 Avicennia marina HOM05D007019 ORTHO05D008398 1.3e-163 580.5 504 64.3
Medtr3g053700 Medicago truncatula HOM05D007019 ORTHO05D008398 4.0e-162 575.5 500 63.8
MELO3C011312.2 Cucumis melo HOM05D007019 ORTHO05D008398 2.0e-161 573.2 501 63.5
Sabra18G0019700 Salix brachista HOM05D007019 ORTHO05D008398 2.0e-161 573.2 531 62.3
DCAR_003030 Daucus carota HOM05D007019 ORTHO05D008398 2.6e-161 572.8 500 62.4
PGSC0003DMG400014784 Solanum tuberosum HOM05D007019 ORTHO05D008398 4.5e-161 572.0 503 62.8
TPR.G32253 Trifolium pratense HOM05D007019 ORTHO05D008398 5.8e-161 571.6 500 62.0
Solyc08g068820.3 Solanum lycopersicum HOM05D007019 ORTHO05D008398 3.8e-160 568.9 502 62.2
MBI14_g16432_MAGBIO Magnolia biondii HOM05D007019 ORTHO05D008398 1.1e-159 567.4 507 63.7
CsaV3_2G032590 Cucumis sativus L. HOM05D007019 ORTHO05D008398 7.1e-159 564.7 501 62.7
VMungo0540G1233 Vigna mungo HOM05D007019 ORTHO05D008398 2.5e-156 556.2 502 62.7
Migut.E01445 Erythranthe guttata HOM05D007019 ORTHO05D008398 1.3e-155 553.9 506 61.9
CAN.G273.24 Capsicum annuum HOM05D007019 ORTHO05D008398 2.1e-155 553.1 502 62.4
Ca_26389_v3 Cicer arietinum L. HOM05D007019 ORTHO05D008398 2.8e-155 552.7 500 62.2
unitig_46.g18223 Utricularia gibba HOM05D007019 ORTHO05D008398 2.8e-155 552.7 504 61.1
Phvul.006G047900 Phaseolus vulgaris HOM05D007019 ORTHO05D008398 1.1e-154 550.8 503 62.0
Aqoxy7G03288 Aquilegia oxysepala HOM05D007019 ORTHO05D008398 3.1e-154 549.3 500 59.6
FAN15G0718 Fragaria x ananassa HOM05D007019 ORTHO05D008398 3.1e-154 549.3 519 61.7
Oeu021907.1 Olea europaea HOM05D007019 ORTHO05D008398 3.1e-154 549.3 503 60.8
EL10Ac2g02454 Beta vulgaris HOM05D007019 ORTHO05D008398 1.2e-153 547.4 551 58.4
Sed0002524 Sechium edule HOM05D007019 ORTHO05D008398 2.0e-153 546.6 511 59.5
Hund25606 Selenicereus undatus HOM05D007019 ORTHO05D008398 3.8e-152 542.3 528 60.0
ATR0580G102 Amborella trichopoda HOM05D007019 ORTHO05D008398 2.1e-150 536.6 506 58.9
HanXRQChr03g0084841 Helianthus annuus HOM05D007019 ORTHO05D008398 4.6e-150 535.4 526 59.3
Lsat_1_v5_gn_6_78060 Lactuca sativa HOM05D007019 ORTHO05D008398 2.8e-147 526.2 508 59.3
PSO731G0070 Papaver somniferum HOM05D007019 ORTHO05D008398 3.7e-147 525.8 507 57.8
ECA240G4302 Erigeron canadensis HOM05D007019 ORTHO05D008398 8.2e-147 524.6 525 58.3
THA.LOC104819948 Tarenaya hassleriana HOM05D007019 ORTHO05D008398 2.4e-146 523.1 516 57.4
Cpa.g.sc148.46 Carica papaya HOM05D007019 ORTHO05D008398 3.1e-146 522.7 507 60.4
Sp4g03850 Schrenkiella parvula HOM05D007019 ORTHO05D008398 6.9e-146 521.5 509 58.3
CDE04G0815 Ceratophyllum demersum HOM05D007019 ORTHO05D008398 2.6e-145 519.6 518 56.0
PSO210G0129 Papaver somniferum HOM05D007019 ORTHO05D008398 4.5e-145 518.8 513 56.9
Nitab4.5_0000406g0110 Nicotiana tabacum HOM05D007019 ORTHO05D008398 1.0e-144 517.7 504 59.1
Zm00001eb257650 Zea mays HOM05D007019 ORTHO05D008398 2.2e-144 516.5 500 58.8
SGA_v2.0_scaffold169G38600 Striga asiatica HOM05D007019 ORTHO05D008398 5.5e-143 511.9 513 59.8
Carub.0004s0445 Capsella rubella HOM05D007019 ORTHO05D008398 2.1e-142 510.0 510 56.9
Sc23g0006120 Simmondsia chinensis HOM05D007019 ORTHO05D008398 2.3e-141 506.5 516 58.1
CARHR294580 Cardamine hirsuta HOM05D007019 ORTHO05D008398 6.7e-141 505.0 514 56.2
AUR62032443 Chenopodium quinoa HOM05D007019 ORTHO05D008398 8.7e-141 504.6 526 57.2
Thhalv10000137m.g Eutrema salsugineum HOM05D007019 ORTHO05D008398 3.7e-139 499.2 514 56.2
AUR62024776 Chenopodium quinoa HOM05D007019 ORTHO05D008398 6.3e-139 498.4 539 56.4
AT2G24830 Arabidopsis thaliana HOM05D007019 ORTHO05D008398 2.0e-137 493.4 508 55.1
BraA09t41004Z Brassica rapa HOM05D007019 ORTHO05D008398 1.3e-136 490.7 508 55.7
Aa31LG7G11570 Aethionema arabicum HOM05D007019 ORTHO05D008398 1.7e-136 490.3 508 57.1
Sopen08g022560 Solanum pennellii HOM05D007019 ORTHO05D008398 4.2e-135 485.7 411 62.8
Nitab4.5_0012106g0030 Nicotiana tabacum HOM05D007019 ORTHO05D008398 4.6e-134 482.3 504 56.3
A09p56090 Brassica napus HOM05D007019 ORTHO05D008398 7.9e-134 481.5 507 55.2
A09p56030 Brassica napus HOM05D007019 ORTHO05D008398 6.7e-133 478.4 506 54.3
AL4G15870 Arabidopsis lyrata HOM05D007019 ORTHO05D008398 8.8e-133 478.0 510 54.3
HPP92_010745 Vanilla planifolia HOM05D007019 ORTHO05D008398 1.1e-132 477.6 509 55.4
BolC8t51475H Brassica oleracea HOM05D007019 ORTHO05D008398 8.5e-128 461.5 509 53.0
C08p39020 Brassica napus HOM05D007019 ORTHO05D008398 1.1e-127 461.1 509 53.2
TAR636G0280 Trochodendron aralioides HOM05D007019 ORTHO05D008398 6.7e-125 451.8 353 67.7
vmacro11274 Vaccinium macrocarpon HOM05D007019 ORTHO05D008398 8.2e-123 444.9 499 55.3
BcaC07g40903 Brassica carinata HOM05D007019 ORTHO05D008398 1.5e-121 440.7 501 52.1
SEGI_04420 Sequoiadendron giganteum HOM05D007019 ORTHO05D008398 1.9e-119 433.7 516 50.8
MD08G1051900 Malus domestica HOM05D007019 ORTHO05D008398 6.7e-117 425.2 362 66.6
Dinv03401 Davidia involucrata HOM05D007019 ORTHO05D008398 5.9e-113 412.1 372 64.0
Hma1.2p1_0737F.1_g210800 Hydrangea macrophylla HOM05D007019 ORTHO05D008398 9.8e-108 394.8 334 66.8
Pp3c21_5730 Physcomitrium patens HOM05D007019 ORTHO05D008398 4.4e-100 369.4 521 45.5
Mapoly0067s0020 Marchantia polymorpha HOM05D007019 ORTHO05D008398 1.4e-98 364.4 517 43.3
SMO116G0382 Selaginella moellendorffii HOM05D007019 ORTHO05D008398 2.9e-96 356.7 506 45.5
SHI21092 Sapria himalayana HOM05D007019 ORTHO05D008398 1.2e-86 324.7 581 40.3
Dinv10229 Davidia involucrata HOM05D007019 ORTHO05D008398 4.1e-82 309.7 356 54.8
GSVIVG01036005001 Vitis vinifera HOM05D007019 ORTHO05D008398 3.4e-68 263.5 191 71.7
CBR_g30106 Chara braunii HOM05D007019 ORTHO05D008398 1.4e-58 231.5 563 34.3
AagrBONN_evm.TU.Sc2ySwM_117.1463 Anthoceros agrestis HOM05D007019 ORTHO05D008398 5.4e-58 229.6 361 43.5
SalBow6G1623 Salvia bowleyana HOM05D007019 ORTHO05D008398 2.5e-39 167.5 193 52.8
Peaxi162Scf01419g00115 Petunia axillaris HOM05D007019 ORTHO05D008398 1.0e-35 155.6 144 58.3
SMO116G0105 Selaginella moellendorffii HOM05D007019 ORTHO05D008398 1.2e-33 148.7 326 37.7
Os02g0793000 Oryza sativa ssp. japonica HOM05D007019 ORTHO05D008398 1.5e-28 131.7 110 60.0
SMO269G0003 Selaginella moellendorffii HOM05D007019 ORTHO05D008398 2.4e-21 107.8 337 33.8
AagrBONN_evm.TU.Sc2ySwM_117.1462 Anthoceros agrestis HOM05D007019 ORTHO05D008398 4.1e-21 107.1 150 45.3
Sabra03G0085400 Salix brachista HOM05D007019 ORTHO05D008398 3.3e-07 60.8 55 60.0
CANSAT11G2415 Cannabis sativa HOM05D004574 ORTHO05D005612 9.7e-07 59.3 65 46.2
CSS0028433 Camellia sinensis var. sinensis HOM05D004574 ORTHO05D005612 1.3e-06 58.9 52 53.8
Nn2g12259 Nelumbo nucifera HOM05D004574 ORTHO05D005612 3.7e-06 57.4 69 44.9
Oeu040778.1 Olea europaea HOM05D004574 ORTHO05D005612 6.3e-06 56.6 66 48.5
Actinidia04251 Actinidia chinensis HOM05D004574 ORTHO05D005612 8.2e-06 56.2 54 50.0


User provided reference genes

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