Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGR044G2241 Punica granatum HOM05D007061 ORTHO05D009017 1.3e-249 865.9 442 100.0
Potri.010G173800 Populus trichocarpa HOM05D007061 ORTHO05D009017 4.9e-196 688.0 442 76.2
Sabra10G0133700 Salix brachista HOM05D007061 ORTHO05D009017 4.6e-194 681.4 452 75.2
FvH4_3g14100 Fragaria vesca HOM05D007061 ORTHO05D009017 1.9e-192 676.0 435 75.6
Eucgr.K03462 Eucalyptus grandis HOM05D007061 ORTHO05D009017 3.3e-192 675.2 433 75.8
MD10G1216400 Malus domestica HOM05D007061 ORTHO05D009017 7.4e-192 674.1 439 74.7
RcHm_v2.0_Chr5g0023411 Rosa chinensis HOM05D007061 ORTHO05D009017 1.3e-191 673.3 435 76.3
THA.LOC104810275 Tarenaya hassleriana HOM05D007061 ORTHO05D009017 1.3e-188 663.3 440 73.4
QL04p093744 Quercus lobata HOM05D007061 ORTHO05D009017 1.7e-188 662.9 465 72.0
Gohir.D07G048400 Gossypium hirsutum HOM05D007061 ORTHO05D009017 2.2e-188 662.5 418 77.0
Ciclev10004974m.g Citrus clementina HOM05D007061 ORTHO05D009017 2.9e-188 662.1 437 74.8
CANSAT35G1572 Cannabis sativa HOM05D007061 ORTHO05D009017 4.9e-188 661.4 439 74.5
Duzib213G0730 Durio zibethinus HOM05D007061 ORTHO05D009017 4.9e-188 661.4 446 74.7
Gorai.001G051600 Gossypium raimondii HOM05D007061 ORTHO05D009017 4.9e-188 661.4 449 73.5
CsaV3_6G013460 Cucumis sativus L. HOM05D007061 ORTHO05D009017 7.1e-187 657.5 433 73.9
Glyma.08G234700 Glycine max HOM05D007061 ORTHO05D009017 2.1e-186 656.0 445 72.6
TPR.G9404 Trifolium pratense HOM05D007061 ORTHO05D009017 2.1e-186 656.0 433 74.4
Lj3g0003258 Lotus japonicus HOM05D007061 ORTHO05D009017 7.9e-186 654.1 434 74.0
TAR627G0473 Trochodendron aralioides HOM05D007061 ORTHO05D009017 2.3e-185 652.5 433 74.6
Prupe.4G128300 Prunus persica HOM05D007061 ORTHO05D009017 3.9e-185 651.7 411 77.1
Aqoxy2G00253 Aquilegia oxysepala HOM05D007061 ORTHO05D009017 3.3e-184 648.7 437 74.1
Psat4g170560 Pisum sativum HOM05D007061 ORTHO05D009017 4.3e-184 648.3 433 74.1
Lalb_Chr03g0031881 Lupinus albus HOM05D007061 ORTHO05D009017 5.6e-184 647.9 437 72.8
Ca_23083_v3 Cicer arietinum L. HOM05D007061 ORTHO05D009017 9.6e-184 647.1 433 73.2
Aa31LG10G30 Aethionema arabicum HOM05D007061 ORTHO05D009017 3.1e-182 642.1 429 71.3
AL1G64530 Arabidopsis lyrata HOM05D007061 ORTHO05D009017 1.2e-181 640.2 432 71.8
ClCG02G018710 Citrullus lanatus HOM05D007061 ORTHO05D009017 1.2e-181 640.2 447 71.6
CARHR045980 Cardamine hirsuta HOM05D007061 ORTHO05D009017 2.0e-181 639.4 433 71.4
Manes.16G047900 Manihot esculenta HOM05D007061 ORTHO05D009017 2.0e-181 639.4 433 74.4
CiPaw.11G057200 Carya illinoinensis HOM05D007061 ORTHO05D009017 4.5e-181 638.3 435 72.6
PSO675G3863 Papaver somniferum HOM05D007061 ORTHO05D009017 4.5e-181 638.3 418 73.2
Hma1.2p1_0151F.1_g067030 Hydrangea macrophylla HOM05D007061 ORTHO05D009017 5.8e-181 637.9 435 72.9
arahy.Tifrunner.gnm1.ann1.69KP4R Arachis hypogaea HOM05D007061 ORTHO05D009017 2.9e-180 635.6 432 73.1
PSO675G0660 Papaver somniferum HOM05D007061 ORTHO05D009017 3.2e-179 632.1 418 73.0
Nn7g38366 Nelumbo nucifera HOM05D007061 ORTHO05D009017 4.2e-179 631.7 435 72.4
Thhalv10011478m.g Eutrema salsugineum HOM05D007061 ORTHO05D009017 1.2e-178 630.2 444 69.8
Sp1g41850 Schrenkiella parvula HOM05D007061 ORTHO05D009017 7.9e-178 627.5 425 72.0
Actinidia24658 Actinidia chinensis HOM05D007061 ORTHO05D009017 3.9e-177 625.2 440 70.7
ECA240G0752 Erigeron canadensis HOM05D007061 ORTHO05D009017 3.3e-176 622.1 437 70.5
A05p26620 Brassica napus HOM05D007061 ORTHO05D009017 4.3e-176 621.7 408 74.0
BraA05t21537Z Brassica rapa HOM05D007061 ORTHO05D009017 4.3e-176 621.7 408 74.0
Lsat_1_v5_gn_7_70001 Lactuca sativa HOM05D007061 ORTHO05D009017 5.7e-176 621.3 433 72.1
CSS0041382 Camellia sinensis var. sinensis HOM05D007061 ORTHO05D009017 2.2e-175 619.4 405 74.8
C05p41210 Brassica napus HOM05D007061 ORTHO05D009017 3.4e-173 612.1 447 68.9
FAN11G3441 Fragaria x ananassa HOM05D007061 ORTHO05D009017 3.4e-173 612.1 397 75.3
HanXRQChr03g0080291 Helianthus annuus HOM05D007061 ORTHO05D009017 1.3e-172 610.1 437 69.6
BcaB02g10820 Brassica carinata HOM05D007061 ORTHO05D009017 1.9e-171 606.3 417 71.0
Phvul.011G179100 Phaseolus vulgaris HOM05D007061 ORTHO05D009017 5.5e-171 604.7 388 75.3
Zm00001eb233280 Zea mays HOM05D007061 ORTHO05D009017 5.5e-171 604.7 419 71.6
GSVIVG01036723001 Vitis vinifera HOM05D007061 ORTHO05D009017 2.1e-170 602.8 386 76.4
vmacro11681 Vaccinium macrocarpon HOM05D007061 ORTHO05D009017 2.5e-168 595.9 455 65.9
Carub.0001s4486 Capsella rubella HOM05D007061 ORTHO05D009017 4.8e-167 591.7 386 71.8
ATR0763G190 Amborella trichopoda HOM05D007061 ORTHO05D009017 6.3e-167 591.3 441 66.9
Lj2A10G39 Lonicera japonica HOM05D007061 ORTHO05D009017 4.1e-166 588.6 466 65.5
unitig_37.g12195 Utricularia gibba HOM05D007061 ORTHO05D009017 6.5e-164 581.3 421 67.2
SalBow8G1251 Salvia bowleyana HOM05D007061 ORTHO05D009017 8.8e-161 570.9 532 56.8
arahy.Tifrunner.gnm1.ann1.RLLR5G Arachis hypogaea HOM05D007061 ORTHO05D009017 1.8e-158 563.1 645 49.6
Cc05_g16540 Coffea canephora HOM05D007061 ORTHO05D009017 7.0e-158 561.2 396 71.0
Gohir.A07G044000 Gossypium hirsutum HOM05D007061 ORTHO05D009017 2.9e-156 555.8 449 65.7
Atru.chr1.57 Acer truncatum HOM05D007061 ORTHO05D009017 1.6e-154 550.1 355 75.5
FAN16G1770 Fragaria x ananassa HOM05D007061 ORTHO05D009017 4.7e-154 548.5 442 64.9
FAN25G0842 Fragaria x ananassa HOM05D007061 ORTHO05D009017 3.9e-153 545.4 434 64.1
Migut.M01505 Erythranthe guttata HOM05D007061 ORTHO05D009017 2.4e-150 536.2 439 64.9
Os02g0173700 Oryza sativa ssp. japonica HOM05D007061 ORTHO05D009017 2.0e-149 533.1 367 71.4
BcaC05g28094 Brassica carinata HOM05D007061 ORTHO05D009017 1.3e-148 530.4 461 61.8
Nitab4.5_0000029g0190 Nicotiana tabacum HOM05D007061 ORTHO05D009017 6.5e-148 528.1 431 62.2
Cpa.g.sc32.92 Carica papaya HOM05D007061 ORTHO05D009017 8.5e-148 527.7 345 74.2
SGA_v2.0_scaffold186G40180 Striga asiatica HOM05D007061 ORTHO05D009017 8.5e-148 527.7 434 62.7
Peaxi162Scf00452g00232 Petunia axillaris HOM05D007061 ORTHO05D009017 3.2e-147 525.8 431 61.3
MELO3C019630.2 Cucumis melo HOM05D007061 ORTHO05D009017 3.0e-145 519.2 346 73.1
Pp3c22_13410 Physcomitrium patens HOM05D007061 ORTHO05D009017 4.1e-142 508.8 419 61.1
SalBow8G1458 Salvia bowleyana HOM05D007061 ORTHO05D009017 1.2e-141 507.3 563 50.4
CAN.G943.59 Capsicum annuum HOM05D007061 ORTHO05D009017 5.9e-141 505.0 426 61.7
DCAR_009658 Daucus carota HOM05D007061 ORTHO05D009017 3.2e-139 499.2 338 71.9
AagrBONN_evm.TU.Sc2ySwM_228.3482 Anthoceros agrestis HOM05D007061 ORTHO05D009017 8.8e-137 491.1 408 57.6
Dinv42463 Davidia involucrata HOM05D007061 ORTHO05D009017 5.7e-136 488.4 342 70.8
SMO145G0248 Selaginella moellendorffii HOM05D007061 ORTHO05D009017 5.7e-136 488.4 420 58.6
Mapoly0013s0085 Marchantia polymorpha HOM05D007061 ORTHO05D009017 2.2e-135 486.5 417 59.0
CDE01G0579 Ceratophyllum demersum HOM05D007061 ORTHO05D009017 5.4e-134 481.9 433 59.1
AUR62037650 Chenopodium quinoa HOM05D007061 ORTHO05D009017 1.8e-129 466.8 320 71.2
COL.COLO4_24973 Corchorus olitorius HOM05D007061 ORTHO05D009017 1.3e-124 450.7 441 56.5
TWI59G0237 Tripterygium wilfordii HOM05D007061 ORTHO05D009017 1.2e-122 444.1 288 75.3
Nitab4.5_0002862g0050 Nicotiana tabacum HOM05D007061 ORTHO05D009017 4.7e-122 442.2 474 52.3
Sed0001021 Sechium edule HOM05D007061 ORTHO05D009017 1.9e-118 430.3 288 72.9
Thecc.07G189200 Theobroma cacao HOM05D007061 ORTHO05D009017 4.1e-118 429.1 312 67.9
VMungo1127G1118 Vigna mungo HOM05D007061 ORTHO05D009017 8.6e-116 421.4 288 72.6
Sc03g0005020 Simmondsia chinensis HOM05D007061 ORTHO05D009017 2.5e-107 393.3 294 69.0
Cre16.g649400 Chlamydomonas reinhardtii HOM05D007061 ORTHO05D009017 8.9e-105 384.8 445 47.4
BolC5t32863H Brassica oleracea HOM05D007061 ORTHO05D009017 2.8e-98 363.2 281 66.5
Haze_07765 Corylus avellana HOM05D007061 ORTHO05D009017 1.3e-90 337.8 301 59.8
PRCOL_00003223 Prasinoderma coloniale HOM05D007061 ORTHO05D009017 7.6e-88 328.6 427 42.2
Rhsim06G0244100 Rhododendron simsii HOM05D007061 ORTHO05D009017 1.6e-85 320.9 316 54.4
AT1G54310 Arabidopsis thaliana HOM05D007061 ORTHO05D009017 2.1e-85 320.5 204 74.0
MCO09G574 Micromonas commoda HOM05D007061 ORTHO05D009017 1.9e-78 297.4 456 38.6
arahy.Tifrunner.gnm1.ann1.R5CYRF Arachis hypogaea HOM05D007061 ORTHO05D009017 4.2e-78 296.2 222 70.7
MD05G1238000 Malus domestica HOM05D007061 ORTHO05D009017 8.7e-68 261.9 171 74.9
SEGI_31810 Sequoiadendron giganteum HOM05D007061 ORTHO05D009017 6.1e-61 239.2 213 57.3
Actinidia26210 Actinidia chinensis HOM05D007061 ORTHO05D009017 5.5e-54 216.1 161 69.6
Cre09.g407900 Chlamydomonas reinhardtii HOM05D007061 ORTHO05D009017 1.2e-48 198.4 409 34.5
Rhsim06G0244000 Rhododendron simsii HOM05D007061 ORTHO05D009017 4.5e-48 196.4 179 60.9
SEGI_33801 Sequoiadendron giganteum HOM05D007061 ORTHO05D009017 5.0e-47 193.0 146 63.0
HPP92_028078 Vanilla planifolia HOM05D007061 ORTHO05D009017 4.1e-41 173.3 113 73.5
arahy.Tifrunner.gnm1.ann1.4L0SCR Arachis hypogaea HOM05D007061 ORTHO05D009017 8.5e-39 165.6 103 77.7
SGA_v2.0_scaffold112G31643 Striga asiatica HOM05D007061 ORTHO05D009017 4.2e-38 163.3 105 79.0
SGA_v2.0_scaffold60G20904 Striga asiatica HOM05D007061 ORTHO05D009017 4.2e-38 163.3 105 79.0
Hma1.2p1_0151F.1_g067050 Hydrangea macrophylla HOM05D007061 ORTHO05D009017 1.2e-37 161.8 101 79.2
HPP92_028076 Vanilla planifolia HOM05D007061 ORTHO05D009017 5.2e-36 156.4 111 71.2
RcHm_v2.0_Chr1g0324361 Rosa chinensis HOM05D007061 ORTHO05D009017 5.9e-32 142.9 75 88.0
AUR62041050 Chenopodium quinoa HOM05D007061 ORTHO05D009017 3.6e-21 107.1 62 77.4
Lsat_1_v5_gn_4_131100 Lactuca sativa HOM05D007061 ORTHO05D004266 2.3e-12 77.8 56 62.5
MCO14G211 Micromonas commoda HOM05D027329 ORTHO05D268215 8.9e-12 75.9 333 24.3
Manes.04G057176 Manihot esculenta HOM05D007061 ORTHO05D005365 1.3e-10 72.0 46 78.3
Lsat_1_v5_gn_0_28960 Lactuca sativa HOM05D004968 ORTHO05D005922 5.4e-09 66.6 51 72.5
Lsat_1_v5_gn_3_11400 Lactuca sativa HOM05D003461 ORTHO05D004386 8.6e-07 59.3 101 37.6
MD05G1238100 Malus domestica HOM05D007061 ORTHO05D009017 5.6e-06 56.6 40 65.0


User provided reference genes

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