Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGR044G2216 Punica granatum HOM05D007231 ORTHO05D009024 2.4e-104 382.1 187 100.0
Atru.chr5.1389 Acer truncatum HOM05D007231 ORTHO05D009024 2.0e-82 309.3 187 79.1
Eucgr.K03384 Eucalyptus grandis HOM05D007231 ORTHO05D009024 1.1e-80 303.5 187 78.1
Thecc.01G282400 Theobroma cacao HOM05D007231 ORTHO05D009024 1.6e-79 299.7 187 77.0
Gohir.D08G077400 Gossypium hirsutum HOM05D007231 ORTHO05D009024 3.6e-79 298.5 187 77.0
Manes.05G074400 Manihot esculenta HOM05D007231 ORTHO05D009024 3.6e-79 298.5 187 75.4
Cfa006118 Carpinus fangiana HOM05D007231 ORTHO05D009024 4.6e-79 298.1 187 75.9
CiPaw.08G104200 Carya illinoinensis HOM05D007231 ORTHO05D009024 4.6e-79 298.1 187 77.0
GSVIVG01011110001 Vitis vinifera HOM05D007231 ORTHO05D009024 7.9e-79 297.4 187 76.5
Gorai.004G082300 Gossypium raimondii HOM05D007231 ORTHO05D009024 2.3e-78 295.8 187 76.5
COL.COLO4_09128 Corchorus olitorius HOM05D007231 ORTHO05D009024 3.9e-78 295.0 187 77.0
QL12p022281 Quercus lobata HOM05D007231 ORTHO05D009024 1.1e-77 293.5 186 75.8
Duzib211G0396 Durio zibethinus HOM05D007231 ORTHO05D009024 4.3e-77 291.6 187 74.9
CSS0040014 Camellia sinensis var. sinensis HOM05D007231 ORTHO05D009024 7.4e-77 290.8 187 75.4
Dinv32951 Davidia involucrata HOM05D007231 ORTHO05D009024 9.7e-77 290.4 188 74.5
Gohir.A08G069100 Gossypium hirsutum HOM05D007231 ORTHO05D009024 1.7e-76 289.7 187 74.9
Actinidia00741 Actinidia chinensis HOM05D007231 ORTHO05D009024 2.8e-76 288.9 187 74.9
Rhsim13G0023500 Rhododendron simsii HOM05D007231 ORTHO05D009024 3.7e-76 288.5 187 73.3
CANSAT25G1925 Cannabis sativa HOM05D007231 ORTHO05D009024 1.1e-75 287.0 187 73.3
Potri.019G046400 Populus trichocarpa HOM05D007231 ORTHO05D009024 4.1e-75 285.0 187 74.3
Ciclev10021857m.g Citrus clementina HOM05D007231 ORTHO05D009024 5.3e-75 284.6 187 72.7
Ciclev10022442m.g Citrus clementina HOM05D007231 ORTHO05D009024 5.3e-75 284.6 187 72.7
Phvul.007G170300 Phaseolus vulgaris HOM05D007231 ORTHO05D009024 5.3e-75 284.6 187 71.1
TAR636G3122 Trochodendron aralioides HOM05D007231 ORTHO05D009024 5.3e-75 284.6 187 73.3
Glyma.10G025400 Glycine max HOM05D007231 ORTHO05D009024 9.1e-75 283.9 187 71.7
Nn1g02166 Nelumbo nucifera HOM05D007231 ORTHO05D009024 9.1e-75 283.9 187 73.3
TAR365G1202 Trochodendron aralioides HOM05D007231 ORTHO05D009024 9.1e-75 283.9 187 74.3
Dinv11248 Davidia involucrata HOM05D007231 ORTHO05D009024 1.5e-74 283.1 187 75.4
THA.LOC104801225 Tarenaya hassleriana HOM05D007231 ORTHO05D009024 4.5e-74 281.6 188 72.9
Lj5g0005680 Lotus japonicus HOM05D007231 ORTHO05D009024 5.9e-74 281.2 187 71.7
Cc01_g19680 Coffea canephora HOM05D007231 ORTHO05D009024 1.3e-73 280.0 187 71.1
Lalb_Chr02g0142831 Lupinus albus HOM05D007231 ORTHO05D009024 2.2e-73 279.3 187 70.1
MD11G1288600 Malus domestica HOM05D007231 ORTHO05D009024 2.2e-73 279.3 189 69.3
CAN.G609.11 Capsicum annuum HOM05D007231 ORTHO05D009024 3.8e-73 278.5 187 70.1
Peaxi162Scf00570g00058 Petunia axillaris HOM05D007231 ORTHO05D009024 3.8e-73 278.5 187 69.0
Sopen09g026640 Solanum pennellii HOM05D007231 ORTHO05D009024 3.8e-73 278.5 187 70.1
CsaV3_7G028660 Cucumis sativus L. HOM05D007231 ORTHO05D009024 6.5e-73 277.7 187 69.5
Solyc09g064930.3 Solanum lycopersicum HOM05D007231 ORTHO05D009024 6.5e-73 277.7 187 69.5
Actinidia09146 Actinidia chinensis HOM05D007231 ORTHO05D009024 8.5e-73 277.3 187 72.2
arahy.Tifrunner.gnm1.ann1.9UA39Y Arachis hypogaea HOM05D007231 ORTHO05D009024 8.5e-73 277.3 188 71.8
arahy.Tifrunner.gnm1.ann1.LJDI86 Arachis hypogaea HOM05D007231 ORTHO05D009024 8.5e-73 277.3 188 71.8
Prupe.8G243400 Prunus persica HOM05D007231 ORTHO05D009024 1.4e-72 276.6 187 70.6
Nitab4.5_0001028g0140 Nicotiana tabacum HOM05D007231 ORTHO05D009024 2.5e-72 275.8 188 70.2
Sabra19G0055900 Salix brachista HOM05D007231 ORTHO05D009024 2.5e-72 275.8 187 70.6
AL1G12740 Arabidopsis lyrata HOM05D007231 ORTHO05D009024 4.2e-72 275.0 188 71.3
Lalb_Chr06g0163091 Lupinus albus HOM05D007231 ORTHO05D009024 5.5e-72 274.6 187 69.0
AT1G03250 Arabidopsis thaliana HOM05D007231 ORTHO05D009024 7.2e-72 274.2 188 70.2
SalBow4G2275 Salvia bowleyana HOM05D007231 ORTHO05D009024 9.4e-72 273.9 188 69.1
vmacro02556 Vaccinium macrocarpon HOM05D007231 ORTHO05D009024 2.1e-71 272.7 187 70.6
Cpa.g.sc64.168 Carica papaya HOM05D007231 ORTHO05D009024 3.6e-71 271.9 187 68.4
MELO3C015851.2 Cucumis melo HOM05D007231 ORTHO05D009024 4.7e-71 271.6 187 68.4
Medtr1g072510 Medicago truncatula HOM05D007231 ORTHO05D009024 4.7e-71 271.6 187 70.6
Ca_09766_v3 Cicer arietinum L. HOM05D002055 ORTHO05D002120 1.8e-70 269.6 185 70.3
Psat6g125920 Pisum sativum HOM05D007231 ORTHO05D009024 1.8e-70 269.6 188 70.7
SGA_v2.0_scaffold1G00456 Striga asiatica HOM05D007231 ORTHO05D009024 1.8e-70 269.6 187 66.3
Aa31LG1G9290 Aethionema arabicum HOM05D007231 ORTHO05D009024 2.3e-70 269.2 188 69.1
A10p01800 Brassica napus HOM05D007231 ORTHO05D009024 2.3e-70 269.2 187 68.4
Carub.0001s0236 Capsella rubella HOM05D007231 ORTHO05D009024 2.3e-70 269.2 188 69.1
Nitab4.5_0002386g0100 Nicotiana tabacum HOM05D002055 ORTHO05D009024 2.3e-70 269.2 185 69.7
RcHm_v2.0_Chr6g0291381 Rosa chinensis HOM05D007231 ORTHO05D009024 2.3e-70 269.2 189 68.3
BcaC05g24637 Brassica carinata HOM05D007231 ORTHO05D009024 3.9e-70 268.5 187 69.0
C05p01780 Brassica napus HOM05D007231 ORTHO05D009024 8.8e-70 267.3 187 68.4
PSO210G0158 Papaver somniferum HOM05D007231 ORTHO05D009024 8.8e-70 267.3 188 69.7
CARHR002550 Cardamine hirsuta HOM05D007231 ORTHO05D009024 2.6e-69 265.8 188 68.6
Thhalv10008549m.g Eutrema salsugineum HOM05D007231 ORTHO05D009024 4.4e-69 265.0 188 68.1
VMungo0720G1677 Vigna mungo HOM05D002055 ORTHO05D002120 4.4e-69 265.0 184 69.6
BcaC05g24551 Brassica carinata HOM05D007231 ORTHO05D009024 9.7e-69 263.8 188 67.6
BraA10t42455Z Brassica rapa HOM05D007231 ORTHO05D009024 1.3e-68 263.5 187 67.4
FvH4_2g23810 Fragaria vesca HOM05D007231 ORTHO05D009024 1.3e-68 263.5 189 68.3
HanXRQChr01g0002311 Helianthus annuus HOM05D007231 ORTHO05D009024 2.2e-68 262.7 187 63.6
AUR62036799 Chenopodium quinoa HOM05D007231 ORTHO05D009024 2.8e-68 262.3 188 64.4
Oeu015959.1 Olea europaea HOM05D007231 ORTHO05D009024 2.8e-68 262.3 187 67.9
Sp1g02240 Schrenkiella parvula HOM05D007231 ORTHO05D009024 4.8e-68 261.5 188 67.6
BolC5t28956H Brassica oleracea HOM05D007231 ORTHO05D009024 1.1e-67 260.4 194 66.0
Lj2C1175G18 Lonicera japonica HOM05D007231 ORTHO05D009024 2.4e-67 259.2 252 55.6
Oeu022878.1 Olea europaea HOM05D007231 ORTHO05D009024 4.1e-67 258.5 187 66.8
MSTRG.18222 Avicennia marina HOM05D007231 ORTHO05D009024 5.3e-67 258.1 187 66.3
Migut.D00275 Erythranthe guttata HOM05D007231 ORTHO05D009024 5.3e-67 258.1 188 66.0
FAN27G1680 Fragaria x ananassa HOM05D007231 ORTHO05D009024 1.2e-66 256.9 196 65.8
HanXRQChr11g0327631 Helianthus annuus HOM05D007231 ORTHO05D009024 2.0e-66 256.1 187 64.2
MBI19_g24716_MAGBIO Magnolia biondii HOM05D007231 ORTHO05D009024 2.0e-66 256.1 185 65.9
Lsat_1_v5_gn_5_190100 Lactuca sativa HOM05D007231 ORTHO05D009024 4.5e-66 255.0 186 64.0
Hund05352 Selenicereus undatus HOM05D007231 ORTHO05D009024 1.3e-65 253.4 187 64.7
ECA248G0248 Erigeron canadensis HOM05D002055 ORTHO05D002120 1.7e-65 253.1 184 64.1
Sed0024964 Sechium edule HOM05D002055 ORTHO05D002120 7.2e-64 247.7 169 68.0
Aqoxy2G03271 Aquilegia oxysepala HOM05D007231 ORTHO05D009024 2.7e-63 245.7 184 64.7
unitig_0.g109 Utricularia gibba HOM05D007231 ORTHO05D009024 6.1e-63 244.6 187 59.4
SGA_v2.0_scaffold11G05804 Striga asiatica HOM05D002055 ORTHO05D002120 6.7e-62 241.1 195 57.9
FAN20G2044 Fragaria x ananassa HOM05D007231 ORTHO05D009024 1.7e-60 236.5 238 54.2
EL10Ac7g17220 Beta vulgaris HOM05D007231 ORTHO05D009024 1.3e-57 226.9 238 48.7
Duzib138G1636 Durio zibethinus HOM05D007231 ORTHO05D009024 1.5e-56 223.4 187 63.6
CDE04G0796 Ceratophyllum demersum HOM05D007231 ORTHO05D009024 2.1e-55 219.5 185 58.9
Os12g0144000 Oryza sativa ssp. japonica HOM05D007231 ORTHO05D009024 1.8e-54 216.5 184 54.3
ClCG09G006940 Citrullus lanatus HOM05D002055 ORTHO05D002120 3.0e-54 215.7 136 71.3
Os11g0147100 Oryza sativa ssp. japonica HOM05D007231 ORTHO05D009024 6.8e-54 214.5 183 53.6
TWI14G0923 Tripterygium wilfordii HOM05D002055 ORTHO05D002120 5.7e-53 211.5 136 73.5
Zm00001eb342980 Zea mays HOM05D007231 ORTHO05D009024 2.4e-51 206.1 182 53.3
Zm00001eb196600 Zea mays HOM05D007231 ORTHO05D009024 5.9e-50 201.4 185 54.1
AUR62039907 Chenopodium quinoa HOM05D007231 ORTHO05D009024 7.7e-50 201.1 137 66.4
ATR0626G005 Amborella trichopoda HOM05D007231 ORTHO05D009024 2.0e-45 186.4 170 51.2
HPP92_016066 Vanilla planifolia HOM05D006695 ORTHO05D008239 3.5e-42 175.6 150 57.3
TPR.G19967 Trifolium pratense HOM05D007231 ORTHO05D009024 1.9e-40 169.9 120 70.0
Sc05g0004910 Simmondsia chinensis HOM05D007231 ORTHO05D009024 3.9e-33 145.6 102 65.7
SEGI_15193 Sequoiadendron giganteum HOM05D007231 ORTHO05D009024 6.8e-30 134.8 202 37.6
Cc01_g19320 Coffea canephora HOM05D007231 ORTHO05D009024 2.3e-25 119.8 136 54.4
Mapoly0057s0044 Marchantia polymorpha HOM05D007231 ORTHO05D009024 1.2e-21 107.5 207 36.7
BcaC05g24635 Brassica carinata HOM05D007231 ORTHO05D009024 1.7e-17 93.6 78 57.7
AagrBONN_evm.TU.Sc2ySwM_117.667 Anthoceros agrestis HOM05D007231 ORTHO05D009024 3.0e-17 92.8 189 29.6
Pp3c4_28170 Physcomitrium patens HOM05D007231 ORTHO05D009024 3.0e-17 92.8 190 32.1
SMO137G0298 Selaginella moellendorffii HOM05D007231 ORTHO05D009024 3.9e-17 92.4 186 33.3
SMO170G0043 Selaginella moellendorffii HOM05D007231 ORTHO05D009024 8.6e-17 91.3 186 32.8
MCO13G326 Micromonas commoda HOM05D007231 ORTHO05D009024 2.8e-15 86.3 164 32.9
Cre01.g040100 Chlamydomonas reinhardtii HOM05D007231 ORTHO05D009024 2.9e-12 76.3 152 30.9
TPR.G17639 Trifolium pratense HOM05D007231 ORTHO05D009024 1.3e-09 67.4 44 65.9
TPR.G23952 Trifolium pratense HOM05D007231 ORTHO05D009024 1.3e-09 67.4 44 65.9
CDE02G2493 Ceratophyllum demersum HOM05D007231 ORTHO05D009024 1.7e-09 67.0 66 54.5
CDE02G1070 Ceratophyllum demersum HOM05D007231 ORTHO05D009024 1.9e-08 63.5 51 54.9
COL.COLO4_09126 Corchorus olitorius HOM05D002055 ORTHO05D002120 6.8e-06 55.1 55 54.5


User provided reference genes

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