Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGR044G2202 Punica granatum HOM05D007563 ORTHO05D009546 1.0e-99 366.7 180 100.0
Thecc.02G156900 Theobroma cacao HOM05D007563 ORTHO05D009546 2.3e-59 232.6 175 66.9
Duzib248G0691 Durio zibethinus HOM05D007563 ORTHO05D009546 8.8e-59 230.7 171 68.4
Eucgr.J00882 Eucalyptus grandis HOM05D007563 ORTHO05D009546 1.1e-58 230.3 164 68.3
Gohir.D13G060600 Gossypium hirsutum HOM05D007563 ORTHO05D009546 2.6e-58 229.2 179 65.9
Gohir.A13G061300 Gossypium hirsutum HOM05D007563 ORTHO05D009546 4.4e-58 228.4 179 65.9
Glyma.10G285700 Glycine max HOM05D007563 ORTHO05D009546 2.2e-57 226.1 164 64.6
Gorai.013G068700 Gossypium raimondii HOM05D007563 ORTHO05D009546 2.2e-57 226.1 179 65.4
TAR622G0982 Trochodendron aralioides HOM05D007563 ORTHO05D009546 1.4e-56 223.4 164 67.1
Nitab4.5_0000069g0150 Nicotiana tabacum HOM05D007563 ORTHO05D009546 9.1e-56 220.7 163 63.8
RcHm_v2.0_Chr4g0398681 Rosa chinensis HOM05D007563 ORTHO05D009546 2.6e-55 219.2 162 64.2
Potri.005G090400 Populus trichocarpa HOM05D007563 ORTHO05D009546 3.4e-55 218.8 165 66.7
CAN.G282.47 Capsicum annuum HOM05D007563 ORTHO05D009546 5.9e-55 218.0 161 64.6
Ca_11254_v3 Cicer arietinum L. HOM05D007563 ORTHO05D009546 1.0e-54 217.2 154 67.5
Rhsim09G0069800 Rhododendron simsii HOM05D007563 ORTHO05D009546 1.0e-54 217.2 164 67.1
Nitab4.5_0002387g0070 Nicotiana tabacum HOM05D007563 ORTHO05D009546 1.7e-54 216.5 164 63.4
FAN12G1059 Fragaria x ananassa HOM05D007563 ORTHO05D009546 2.9e-54 215.7 162 64.2
MD16G1243400 Malus domestica HOM05D007563 ORTHO05D009546 2.9e-54 215.7 164 64.0
Sopen01g003780 Solanum pennellii HOM05D007563 ORTHO05D009546 2.9e-54 215.7 157 66.2
Hma1.2p1_0513F.1_g169460 Hydrangea macrophylla HOM05D007563 ORTHO05D009546 8.5e-54 214.2 163 65.0
Lj3A848G48 Lonicera japonica HOM05D007563 ORTHO05D009546 8.5e-54 214.2 162 64.2
TPR.G4067 Trifolium pratense HOM05D007563 ORTHO05D009546 8.5e-54 214.2 154 66.2
Lj5g0022450 Lotus japonicus HOM05D007563 ORTHO05D009546 1.1e-53 213.8 164 62.2
Prupe.1G070600 Prunus persica HOM05D007563 ORTHO05D009546 1.1e-53 213.8 171 60.8
THA.LOC104818377 Tarenaya hassleriana HOM05D007563 ORTHO05D009546 1.1e-53 213.8 163 61.3
FvH4_4g06750 Fragaria vesca HOM05D007563 ORTHO05D009546 1.4e-53 213.4 162 63.6
PGSC0003DMG400016398 Solanum tuberosum HOM05D007563 ORTHO05D009546 1.4e-53 213.4 163 63.8
Nn3g18621 Nelumbo nucifera HOM05D007563 ORTHO05D009546 2.5e-53 212.6 165 63.0
CSS0014548 Camellia sinensis var. sinensis HOM05D007563 ORTHO05D009546 4.2e-53 211.8 162 66.7
Ciclev10032938m.g Citrus clementina HOM05D007563 ORTHO05D009546 4.2e-53 211.8 166 65.7
arahy.Tifrunner.gnm1.ann1.B4R3WF Arachis hypogaea HOM05D007563 ORTHO05D009546 5.5e-53 211.5 156 66.0
Psat6g233640 Pisum sativum HOM05D007563 ORTHO05D009546 5.5e-53 211.5 154 66.2
Solyc01g008260.4 Solanum lycopersicum HOM05D007563 ORTHO05D009546 7.2e-53 211.1 157 65.0
Medtr1g114370 Medicago truncatula HOM05D007563 ORTHO05D009546 1.2e-52 210.3 154 66.9
arahy.Tifrunner.gnm1.ann1.02I6X5 Arachis hypogaea HOM05D007563 ORTHO05D009546 1.6e-52 209.9 156 65.4
COL.COLO4_33083 Corchorus olitorius HOM05D007563 ORTHO05D009546 2.7e-52 209.1 146 70.5
Cfa008765 Carpinus fangiana HOM05D007563 ORTHO05D009546 3.6e-52 208.8 167 62.9
VMungo0720G1614 Vigna mungo HOM05D007563 ORTHO05D009546 7.9e-52 207.6 165 61.2
Oeu013196.2 Olea europaea HOM05D007563 ORTHO05D009546 1.8e-51 206.5 211 55.0
Peaxi162Scf00021g02222 Petunia axillaris HOM05D007563 ORTHO05D009546 3.9e-51 205.3 145 69.0
Phvul.007G015100 Phaseolus vulgaris HOM05D007563 ORTHO05D009546 6.7e-51 204.5 163 61.3
GSVIVG01026146001 Vitis vinifera HOM05D007563 ORTHO05D009546 6.7e-51 204.5 158 65.8
PSO017G0076 Papaver somniferum HOM05D007563 ORTHO05D009546 8.8e-51 204.1 147 66.7
Lalb_Chr06g0163901 Lupinus albus HOM05D007563 ORTHO05D009546 1.1e-50 203.8 164 61.0
PSO478G0646 Papaver somniferum HOM05D007563 ORTHO05D009546 1.1e-50 203.8 147 68.7
vmacro15986 Vaccinium macrocarpon HOM05D007563 ORTHO05D009546 4.4e-50 201.8 148 69.6
QL03p034961 Quercus lobata HOM05D007563 ORTHO05D009546 5.7e-50 201.4 168 59.5
Hund24382 Selenicereus undatus HOM05D007563 ORTHO05D009546 4.8e-49 198.4 163 61.3
ECA234G0294 Erigeron canadensis HOM05D007563 ORTHO05D009546 1.1e-48 197.2 145 67.6
TWI53G1187 Tripterygium wilfordii HOM05D007563 ORTHO05D009546 1.4e-48 196.8 165 60.6
AL6G18750 Arabidopsis lyrata HOM05D007563 ORTHO05D009546 2.4e-48 196.1 151 60.9
DCAR_026884 Daucus carota HOM05D007563 ORTHO05D009546 2.4e-48 196.1 146 65.8
Thhalv10014924m.g Eutrema salsugineum HOM05D007563 ORTHO05D009546 3.1e-48 195.7 152 60.5
Aa31LG3G18250 Aethionema arabicum HOM05D007563 ORTHO05D009546 9.1e-48 194.1 153 60.1
Atru.chr11.1116 Acer truncatum HOM05D007563 ORTHO05D009546 1.2e-47 193.7 164 59.8
MSTRG.8089 Avicennia marina HOM05D007563 ORTHO05D009546 1.2e-47 193.7 165 64.2
unitig_22.g6356 Utricularia gibba HOM05D007563 ORTHO05D009546 2.0e-47 193.0 156 63.5
Carub.0006s0721 Capsella rubella HOM05D007563 ORTHO05D009546 4.5e-47 191.8 152 59.2
AT5G08320 Arabidopsis thaliana HOM05D007563 ORTHO05D009546 7.7e-47 191.0 151 57.6
CANSAT78G0704 Cannabis sativa HOM05D007563 ORTHO05D009546 1.7e-46 189.9 165 60.0
Nitab4.5_0000069g0170 Nicotiana tabacum HOM05D007563 ORTHO05D009546 1.7e-46 189.9 143 60.8
Sp6g34630 Schrenkiella parvula HOM05D007563 ORTHO05D009546 1.7e-46 189.9 153 60.1
Sc21g0003780 Simmondsia chinensis HOM05D007563 ORTHO05D009546 1.7e-46 189.9 154 61.7
C02p03530 Brassica napus HOM05D007563 ORTHO05D009546 2.2e-46 189.5 153 58.8
CARHR204780 Cardamine hirsuta HOM05D007563 ORTHO05D009546 2.9e-46 189.1 152 59.9
MBI03_g13825_MAGBIO Magnolia biondii HOM05D007563 ORTHO05D009546 2.9e-46 189.1 162 58.0
BolC2t06312H Brassica oleracea HOM05D007563 ORTHO05D009546 5.0e-46 188.3 153 58.2
HanXRQChr16g0528531 Helianthus annuus HOM05D007563 ORTHO05D009546 6.5e-46 188.0 179 55.9
Aqoxy2G00835 Aquilegia oxysepala HOM05D007563 ORTHO05D009546 3.2e-45 185.7 153 62.1
Lsat_1_v5_gn_4_64620 Lactuca sativa HOM05D007563 ORTHO05D009546 5.5e-45 184.9 160 60.0
EL10Ac9g22975 Beta vulgaris HOM05D007563 ORTHO05D009546 1.2e-44 183.7 161 59.0
AUR62017724 Chenopodium quinoa HOM05D007563 ORTHO05D009546 1.2e-44 183.7 144 63.2
Zm00001eb248280 Zea mays HOM05D007563 ORTHO05D009546 1.2e-44 183.7 179 52.0
Haze_11776 Corylus avellana HOM05D007563 ORTHO05D009546 4.7e-44 181.8 218 47.2
SEGI_01872 Sequoiadendron giganteum HOM05D007563 ORTHO05D009546 6.1e-44 181.4 154 56.5
BraA02t04951Z Brassica rapa HOM05D007563 ORTHO05D009546 8.0e-44 181.0 145 58.6
Os02g0635700 Oryza sativa ssp. japonica HOM05D007563 ORTHO05D009546 1.0e-43 180.6 155 57.4
CDE04G1527 Ceratophyllum demersum HOM05D007563 ORTHO05D009546 2.3e-43 179.5 147 55.8
HPP92_005058 Vanilla planifolia HOM05D007563 ORTHO05D009546 1.5e-42 176.8 166 53.6
AUR62032956 Chenopodium quinoa HOM05D007563 ORTHO05D009546 5.7e-42 174.9 146 61.0
CiPaw.05G170900 Carya illinoinensis HOM05D007563 ORTHO05D009546 2.2e-41 172.9 133 63.2
Sabra05G0074500 Salix brachista HOM05D007563 ORTHO05D009546 8.2e-41 171.0 153 57.5
ATR0618G415 Amborella trichopoda HOM05D007563 ORTHO05D009546 3.5e-39 165.6 150 52.7
SMO201G0195 Selaginella moellendorffii HOM05D007563 ORTHO05D009546 7.7e-31 137.9 129 51.2
Mapoly0067s0084 Marchantia polymorpha HOM05D007563 ORTHO05D009546 3.2e-29 132.5 181 42.5
BcaC03g13222 Brassica carinata HOM05D007563 ORTHO05D009546 3.6e-28 129.0 114 51.8
Cc00_g07880 Coffea canephora HOM05D007563 ORTHO05D009546 2.6e-26 122.9 75 77.3
Cre01.g041351 Chlamydomonas reinhardtii HOM05D007563 ORTHO05D009546 7.5e-26 121.3 136 45.6
Pp3c13_24580 Physcomitrium patens HOM05D007563 ORTHO05D009546 1.3e-25 120.6 147 43.5
AagrBONN_evm.TU.Sc2ySwM_368.3197 Anthoceros agrestis HOM05D007563 ORTHO05D009546 1.4e-24 117.1 110 52.7
Migut.O00860 Erythranthe guttata HOM05D007563 ORTHO05D009546 2.6e-18 96.3 79 58.2
Migut.L00866 Erythranthe guttata HOM05D007563 ORTHO05D009546 4.4e-18 95.5 100 50.0
MCO14G254 Micromonas commoda HOM05D007563 ORTHO05D009546 1.7e-14 83.6 63 58.7
Duzib132G1246 Durio zibethinus HOM05D007563 ORTHO05D009546 3.0e-14 82.8 80 53.8
Duzib132G0714 Durio zibethinus HOM05D007563 ORTHO05D009546 2.5e-13 79.7 80 52.5
PRCOL_00006925 Prasinoderma coloniale HOM05D007563 ORTHO05D009546 6.2e-12 75.1 113 39.8
CBR_g24157 Chara braunii HOM05D007563 ORTHO05D009546 1.4e-11 73.9 60 56.7
Lj5g0009856 Lotus japonicus HOM05D007563 ORTHO05D009546 4.6e-07 58.9 76 43.4


User provided reference genes

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