Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGR044G2170 Punica granatum HOM05D005062 ORTHO05D006410 4.1e-224 781.2 421 100.0
Atru.chr12.1008 Acer truncatum HOM05D005062 ORTHO05D006410 4.4e-162 575.1 422 74.9
Eucgr.J00992 Eucalyptus grandis HOM05D005062 ORTHO05D006410 3.2e-160 568.9 423 75.7
Duzib106G1045 Durio zibethinus HOM05D005062 ORTHO05D006410 1.9e-157 559.7 421 72.4
QL04p046667 Quercus lobata HOM05D005062 ORTHO05D006410 4.0e-155 552.0 446 68.2
CiPaw.13G040200 Carya illinoinensis HOM05D005062 ORTHO05D006410 4.4e-154 548.5 422 71.8
MD02G1255900 Malus domestica HOM05D005062 ORTHO05D006410 7.6e-154 547.7 422 71.8
Cfa010314 Carpinus fangiana HOM05D005062 ORTHO05D006410 6.4e-153 544.7 412 71.6
Cpa.g.sc183.10 Carica papaya HOM05D005062 ORTHO05D006410 4.6e-151 538.5 422 71.1
Manes.10G058650 Manihot esculenta HOM05D005062 ORTHO05D006410 1.1e-149 533.9 426 70.7
RcHm_v2.0_Chr1g0332571 Rosa chinensis HOM05D005062 ORTHO05D006410 8.1e-148 527.7 421 69.6
Dinv11848 Davidia involucrata HOM05D005062 ORTHO05D006410 9.0e-147 524.2 346 81.5
Gorai.008G099000 Gossypium raimondii HOM05D005062 ORTHO05D006410 2.6e-146 522.7 422 69.2
Sabra08G0014600 Salix brachista HOM05D005062 ORTHO05D006410 1.3e-145 520.4 425 69.4
Potri.008G021600 Populus trichocarpa HOM05D005062 ORTHO05D006410 2.2e-145 519.6 425 68.7
Gohir.A12G092722 Gossypium hirsutum HOM05D005062 ORTHO05D006410 2.9e-145 519.2 419 68.7
GSVIVG01011284001 Vitis vinifera HOM05D005062 ORTHO05D006410 3.2e-144 515.8 404 73.3
FvH4_7g05590 Fragaria vesca HOM05D005062 ORTHO05D006410 4.2e-144 515.4 377 74.8
FAN01G3081 Fragaria x ananassa HOM05D005062 ORTHO05D006410 4.2e-144 515.4 377 74.8
FAN10G1073 Fragaria x ananassa HOM05D005062 ORTHO05D006410 4.6e-143 511.9 377 74.5
CsaV3_2G034960 Cucumis sativus L. HOM05D005062 ORTHO05D006410 1.0e-142 510.8 420 66.4
CSS0050380 Camellia sinensis var. sinensis HOM05D005062 ORTHO05D006410 1.8e-142 510.0 423 68.8
Oeu026579.1 Olea europaea HOM05D005062 ORTHO05D006410 2.5e-141 506.1 372 73.4
CSS0021342 Camellia sinensis var. sinensis HOM05D005062 ORTHO05D006410 1.6e-140 503.4 423 68.6
Nn2g14130 Nelumbo nucifera HOM05D005062 ORTHO05D006410 3.7e-140 502.3 376 72.9
TAR623G1543 Trochodendron aralioides HOM05D005062 ORTHO05D006410 1.4e-139 500.4 388 71.6
THA.LOC104824209 Tarenaya hassleriana HOM05D005062 ORTHO05D006410 1.5e-138 496.9 367 72.5
FAN23G1954 Fragaria x ananassa HOM05D005062 ORTHO05D006410 2.0e-138 496.5 370 74.1
Aqoxy2G01214 Aquilegia oxysepala HOM05D005062 ORTHO05D006410 3.8e-137 492.3 417 66.2
Migut.F01613 Erythranthe guttata HOM05D005062 ORTHO05D006410 4.2e-136 488.8 374 72.2
Solyc07g014740.3 Solanum lycopersicum HOM05D005062 ORTHO05D006410 9.3e-136 487.6 420 66.9
FAN06G1220 Fragaria x ananassa HOM05D005062 ORTHO05D006410 1.2e-135 487.3 351 75.8
HanXRQChr08g0217771 Helianthus annuus HOM05D005062 ORTHO05D006410 1.2e-135 487.3 439 64.2
Lalb_Chr19g0129181 Lupinus albus HOM05D005062 ORTHO05D006410 1.6e-135 486.9 378 70.1
Medtr1g050462 Medicago truncatula HOM05D005062 ORTHO05D006410 6.0e-135 485.0 427 65.1
Nitab4.5_0010225g0010 Nicotiana tabacum HOM05D005062 ORTHO05D006410 1.0e-134 484.2 424 66.5
CAN.G54.5 Capsicum annuum HOM05D005062 ORTHO05D006410 1.3e-134 483.8 414 67.4
FAN23G1474 Fragaria x ananassa HOM05D005062 ORTHO05D006410 1.3e-134 483.8 336 78.0
DCAR_006341 Daucus carota HOM05D005062 ORTHO05D006410 2.3e-134 483.0 427 63.2
Actinidia18593 Actinidia chinensis HOM05D000444 ORTHO05D000489 6.7e-134 481.5 427 66.0
Glyma.10G111800 Glycine max HOM05D005062 ORTHO05D006410 1.1e-133 480.7 404 65.6
Phvul.007G247700 Phaseolus vulgaris HOM05D005062 ORTHO05D006410 9.6e-133 477.6 378 69.6
ECA233G2289 Erigeron canadensis HOM05D005062 ORTHO05D006410 1.3e-132 477.2 431 64.7
Lj5g0026270 Lotus japonicus HOM05D005062 ORTHO05D006410 1.1e-131 474.2 428 61.7
FAN23G2695 Fragaria x ananassa HOM05D005062 ORTHO05D006410 1.4e-131 473.8 432 64.8
Ca_12731_v3 Cicer arietinum L. HOM05D005062 ORTHO05D006410 2.4e-131 473.0 426 62.7
MSTRG.8110 Avicennia marina HOM05D005062 ORTHO05D006410 9.0e-131 471.1 432 63.4
SalBow6G6867 Salvia bowleyana HOM05D005062 ORTHO05D006410 1.2e-130 470.7 343 73.8
Lsat_1_v5_gn_2_104621 Lactuca sativa HOM05D005062 ORTHO05D006410 4.9e-129 465.3 432 62.0
AUR62034504 Chenopodium quinoa HOM05D005062 ORTHO05D006410 8.4e-129 464.5 409 63.1
arahy.Tifrunner.gnm1.ann1.ZAGE2X Arachis hypogaea HOM05D005062 ORTHO05D006410 1.2e-127 460.7 373 68.1
Cc02_g09770 Coffea canephora HOM05D005062 ORTHO05D006410 1.6e-127 460.3 343 72.9
AT3G56160 Arabidopsis thaliana HOM05D005062 ORTHO05D006410 2.7e-127 459.5 367 68.4
CDE06G2329 Ceratophyllum demersum HOM05D005062 ORTHO05D006410 2.7e-127 459.5 373 65.7
arahy.Tifrunner.gnm1.ann1.BZ57JC Arachis hypogaea HOM05D005062 ORTHO05D006410 4.6e-127 458.8 358 69.6
FAN03G1004 Fragaria x ananassa HOM05D005062 ORTHO05D006410 6.0e-127 458.4 425 64.2
Peaxi162Scf00235g10011 Petunia axillaris HOM05D005062 ORTHO05D006410 1.3e-126 457.2 438 62.1
HanXRQChr11g0342201 Helianthus annuus HOM05D005062 ORTHO05D006410 2.3e-126 456.4 426 60.1
Lsat_1_v5_gn_8_23960 Lactuca sativa HOM05D005062 ORTHO05D006410 2.3e-126 456.4 337 72.7
AL5G37480 Arabidopsis lyrata HOM05D005062 ORTHO05D006410 1.1e-125 454.1 380 66.8
Rhsim03G0099700 Rhododendron simsii HOM05D005062 ORTHO05D006410 1.1e-125 454.1 446 61.0
Sp5g06340 Schrenkiella parvula HOM05D005062 ORTHO05D006410 3.3e-125 452.6 368 67.9
BcaC07g39930 Brassica carinata HOM05D002435 ORTHO05D002550 8.2e-124 448.0 371 67.7
BolC8t50765H Brassica oleracea HOM05D002435 ORTHO05D002550 8.2e-124 448.0 371 67.7
BraA09t40366Z Brassica rapa HOM05D005062 ORTHO05D006410 1.1e-123 447.6 376 66.2
A09p49130 Brassica napus HOM05D002435 ORTHO05D002550 3.1e-123 446.0 367 67.6
ECA238G3155 Erigeron canadensis HOM05D005062 ORTHO05D006410 4.1e-123 445.7 332 70.2
C08p31440 Brassica napus HOM05D002435 ORTHO05D002550 1.5e-122 443.7 372 67.7
BcaB01g00026 Brassica carinata HOM05D002435 ORTHO05D002550 2.0e-122 443.4 403 64.0
GSVIVG01036146001 Vitis vinifera HOM05D005062 ORTHO05D006410 4.2e-120 435.6 375 63.7
ATR0081G026 Amborella trichopoda HOM05D005062 ORTHO05D006410 1.8e-118 430.3 359 64.6
CiPaw.14G101300 Carya illinoinensis HOM05D005062 ORTHO05D006410 6.7e-118 428.3 388 61.1
HanXRQChr08g0217571 Helianthus annuus HOM05D005062 ORTHO05D006410 4.1e-115 419.1 415 56.1
Thhalv10006005m.g Eutrema salsugineum HOM05D005062 ORTHO05D006410 1.0e-113 414.5 354 66.7
Os02g0531200 Oryza sativa ssp. japonica HOM05D005062 ORTHO05D006410 6.5e-113 411.8 345 64.3
Thecc.10G106400 Theobroma cacao HOM05D005062 ORTHO05D006410 2.5e-112 409.8 322 68.9
Sopen07g005620 Solanum pennellii HOM05D000002 ORTHO05D000001 9.4e-112 407.9 371 64.4
TPR.G10638 Trifolium pratense HOM05D005062 ORTHO05D006410 3.0e-110 402.9 288 74.7
Sed0016949 Sechium edule HOM05D005062 ORTHO05D006410 1.5e-109 400.6 282 76.2
Eucgr.B03869 Eucalyptus grandis HOM05D005062 ORTHO05D006410 2.2e-108 396.7 341 61.9
HPP92_007815 Vanilla planifolia HOM05D005062 ORTHO05D006410 2.4e-107 393.3 386 58.0
EL10As25g24233 Beta vulgaris HOM05D005062 ORTHO05D006410 1.2e-106 391.0 483 49.3
PGR102G2753 Punica granatum HOM05D005062 ORTHO05D006410 1.4e-104 384.0 331 62.8
Sc12g0004460 Simmondsia chinensis HOM05D005062 ORTHO05D006410 3.9e-102 375.9 391 55.5
Gohir.D12G091480 Gossypium hirsutum HOM05D005062 ORTHO05D006410 2.0e-101 373.6 324 65.7
Ah.08g215800 Amaranthus hybridus HOM05D005062 ORTHO05D006410 1.8e-99 367.1 356 57.3
Ciclev10032297m.g Citrus clementina HOM05D005062 ORTHO05D006410 9.1e-99 364.8 292 70.2
Ah.09g232820 Amaranthus hybridus HOM05D005062 ORTHO05D006410 1.6e-98 364.0 358 58.7
CiPaw.14G101100 Carya illinoinensis HOM05D005062 ORTHO05D006410 1.2e-95 354.4 396 53.8
Hund06778 Selenicereus undatus HOM05D005062 ORTHO05D006410 1.3e-92 344.4 408 52.0
VMungo0720G3089 Vigna mungo HOM05D000444 ORTHO05D000489 1.1e-91 341.3 514 45.5
Prupe.2G079400 Prunus persica HOM05D005062 ORTHO05D006410 9.8e-85 318.2 271 64.9
unitig_578.g16343 Utricularia gibba HOM05D005062 ORTHO05D006410 2.8e-79 300.1 342 54.1
Sc20g0001180 Simmondsia chinensis HOM05D003607 ORTHO05D004049 1.8e-78 297.4 214 74.3
Zm00001eb242730 Zea mays HOM05D005062 ORTHO05D006410 5.2e-78 295.8 244 64.8
MD02G1256100 Malus domestica HOM05D005062 ORTHO05D006410 7.5e-77 292.0 241 65.1
SGA_v2.0_scaffold13G06459 Striga asiatica HOM05D005062 ORTHO05D006410 7.5e-77 292.0 436 45.9
AUR62009772 Chenopodium quinoa HOM05D005062 ORTHO05D006410 1.0e-73 281.6 356 48.9
CARHR166310 Cardamine hirsuta HOM05D005062 ORTHO05D006410 2.1e-71 273.9 223 68.2
Zm00001eb296300 Zea mays HOM05D005062 ORTHO05D006410 6.1e-71 272.3 249 60.2
Carub.0005s2291 Capsella rubella HOM05D005062 ORTHO05D006410 1.4e-70 271.2 220 66.8
Lj3A928T57 Lonicera japonica HOM05D005062 ORTHO05D006410 5.8e-69 265.8 242 64.9
EL10Ac7g15813 Beta vulgaris HOM05D005062 ORTHO05D006410 1.7e-65 254.2 402 42.8
Haze_02484 Corylus avellana HOM05D005062 ORTHO05D006410 2.1e-63 247.3 241 62.7
Mapoly0046s0115 Marchantia polymorpha HOM05D005062 ORTHO05D006410 1.1e-62 245.0 416 38.9
AagrBONN_evm.TU.Sc2ySwM_117.1142 Anthoceros agrestis HOM05D005062 ORTHO05D006410 2.6e-61 240.4 252 52.8
Duzib128G0173 Durio zibethinus HOM05D005062 ORTHO05D006410 9.2e-59 231.9 235 60.4
SMO347G0520 Selaginella moellendorffii HOM05D005062 ORTHO05D006410 1.2e-55 221.5 324 44.4
Haze_23392 Corylus avellana HOM05D005062 ORTHO05D006410 2.1e-55 220.7 237 55.3
AUR62039218 Chenopodium quinoa HOM05D005062 ORTHO05D006410 8.9e-54 215.3 344 40.7
A02p12720 Brassica napus HOM05D005062 ORTHO05D006410 5.1e-49 199.5 237 57.4
Haze_02485 Corylus avellana HOM05D005062 ORTHO05D006410 8.6e-49 198.7 184 57.1
Pp3c3_30210 Physcomitrium patens HOM05D005062 ORTHO05D006410 1.9e-48 197.6 187 56.1
Psat6g129720 Pisum sativum HOM05D005062 ORTHO05D006410 9.9e-45 185.3 146 67.1
PRCOL_00003606 Prasinoderma coloniale HOM05D005062 ORTHO05D006410 6.4e-44 182.6 382 35.1
MD02G1256200 Malus domestica HOM05D005062 ORTHO05D006410 9.2e-43 178.7 125 72.8
Cre09.g395700 Chlamydomonas reinhardtii HOM05D005062 ORTHO05D006410 2.1e-42 177.6 357 37.5
CBR_g48207 Chara braunii HOM05D000019 ORTHO05D000048 1.1e-38 165.2 205 44.9
COL.COLO4_24555 Corchorus olitorius HOM05D005062 ORTHO05D006410 2.0e-37 161.0 101 83.2
QL01p012456 Quercus lobata HOM05D005062 ORTHO05D006410 9.9e-37 158.7 131 64.9
Ciclev10033893m.g Citrus clementina HOM05D005062 ORTHO05D006410 6.6e-33 146.0 103 77.7
MCO15G192 Micromonas commoda HOM05D005062 ORTHO05D006410 8.7e-33 145.6 296 32.1
QL01p012462 Quercus lobata HOM05D005062 ORTHO05D006410 1.9e-32 144.4 132 59.1
Cfa010034 Carpinus fangiana HOM05D005062 ORTHO05D006410 8.1e-31 139.0 122 60.7
Lj3C928T13 Lonicera japonica HOM05D005062 ORTHO05D006410 1.4e-30 138.3 105 67.6
Cre09.g393250 Chlamydomonas reinhardtii HOM05D005062 ORTHO05D006410 1.8e-30 137.9 349 33.0
COL.COLO4_24556 Corchorus olitorius HOM05D005062 ORTHO05D006410 6.9e-30 136.0 84 79.8
FAN01G2457 Fragaria x ananassa HOM05D005062 ORTHO05D006410 1.2e-29 135.2 89 84.3
FAN06G3794 Fragaria x ananassa HOM05D005062 ORTHO05D006410 2.6e-29 134.0 109 68.8
FAN06G0036 Fragaria x ananassa HOM05D005062 ORTHO05D006410 1.7e-28 131.3 184 50.0
Cre12.g521950 Chlamydomonas reinhardtii HOM05D005062 ORTHO05D006410 6.4e-28 129.4 338 30.8
ClCG02G008710 Citrullus lanatus HOM05D005062 ORTHO05D006410 3.2e-27 127.1 153 46.4
Cre06.g250450 Chlamydomonas reinhardtii HOM05D005062 ORTHO05D006410 3.5e-26 123.6 358 27.7
Ca_00262_v3 Cicer arietinum L. HOM05D005062 ORTHO05D006410 3.0e-25 120.6 160 43.1
FvH4_7g05870 Fragaria vesca HOM05D005062 ORTHO05D006410 1.5e-24 118.2 170 50.0
Psat6g129760 Pisum sativum HOM05D005062 ORTHO05D006410 1.9e-24 117.9 160 45.0
Cre02.g147450 Chlamydomonas reinhardtii HOM05D005062 ORTHO05D006410 4.3e-24 116.7 391 29.7
Hma1.2p1_0165F.1_g073310 Hydrangea macrophylla HOM05D005062 ORTHO05D006410 9.0e-22 109.0 66 78.8
GSVIVG01034679001 Vitis vinifera HOM05D005062 ORTHO05D006410 1.2e-21 108.6 68 88.2
BraA02t06329Z Brassica rapa HOM05D005062 ORTHO05D006410 4.5e-21 106.7 75 76.0
Hma1.2p1_1068F.1_g253985 Hydrangea macrophylla HOM05D005062 ORTHO05D006410 9.9e-21 105.5 72 75.0
Haze_23393 Corylus avellana HOM05D005062 ORTHO05D006410 4.9e-20 103.2 82 64.6
SEGI_26426 Sequoiadendron giganteum HOM05D005062 ORTHO05D006410 1.4e-19 101.7 92 54.3
Dinv42565 Davidia involucrata HOM05D005062 ORTHO05D006410 1.6e-18 98.2 107 52.3
RcHm_v2.0_Chr1g0332551 Rosa chinensis HOM05D005062 ORTHO05D006410 6.0e-18 96.3 60 76.7
Hund18750 Selenicereus undatus HOM05D005062 ORTHO05D006410 2.5e-16 90.9 129 41.9
FAN01G2288 Fragaria x ananassa HOM05D005062 ORTHO05D006410 1.5e-13 81.6 55 78.2
SEGI_01082 Sequoiadendron giganteum HOM05D005062 ORTHO05D006410 2.0e-13 81.3 59 72.9
RcHm_v2.0_Chr1g0332541 Rosa chinensis HOM05D005062 ORTHO05D006410 1.1e-11 75.5 58 67.2
MCO11G881 Micromonas commoda HOM05D005062 ORTHO05D028578 4.2e-11 73.6 392 27.6
Ca_12794_v3 Cicer arietinum L. HOM05D005062 ORTHO05D006410 2.1e-10 71.2 54 70.4
MELO3C034937.2 Cucumis melo HOM05D005062 ORTHO05D006410 5.1e-09 66.6 77 51.9
CDE08G0076 Ceratophyllum demersum HOM05D005062 ORTHO05D006410 1.3e-07 62.0 35 82.9
Cre02.g095086 Chlamydomonas reinhardtii HOM05D005062 ORTHO05D028578 1.3e-07 62.0 236 24.2
Cre02.g095085 Chlamydomonas reinhardtii HOM05D005062 ORTHO05D028578 8.2e-07 59.3 275 23.6
SEGI_13629 Sequoiadendron giganteum HOM05D005062 ORTHO05D006410 8.2e-07 59.3 66 48.5
DCAR_017587 Daucus carota HOM05D000943 ORTHO05D008314 5.3e-06 56.6 328 24.7


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