Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGR044G2095 Punica granatum HOM05D007021 ORTHO05D008916 2.7e-104 382.1 204 100.0
QL10p030610 Quercus lobata HOM05D007021 ORTHO05D008916 3.8e-58 228.8 212 61.3
GSVIVG01008459001 Vitis vinifera HOM05D007021 ORTHO05D008916 3.8e-58 228.8 213 62.9
Dinv18013 Davidia involucrata HOM05D007021 ORTHO05D008916 4.2e-57 225.3 199 64.3
Atru.chr9.1670 Acer truncatum HOM05D007021 ORTHO05D008916 7.9e-56 221.1 195 61.5
CiPaw.16G096000 Carya illinoinensis HOM05D007021 ORTHO05D008916 1.3e-55 220.3 213 61.0
CSS0017706 Camellia sinensis var. sinensis HOM05D007021 ORTHO05D008916 2.5e-54 216.1 201 61.7
Ciclev10009503m.g Citrus clementina HOM05D007021 ORTHO05D008916 1.6e-53 213.4 195 63.6
Potri.015G036500 Populus trichocarpa HOM05D007021 ORTHO05D008916 1.4e-52 210.3 209 59.8
Cfa019639 Carpinus fangiana HOM05D007021 ORTHO05D008916 4.0e-52 208.8 152 75.0
Actinidia18882 Actinidia chinensis HOM05D004562 ORTHO05D005435 2.0e-51 206.5 208 58.2
Prupe.5G234700 Prunus persica HOM05D007021 ORTHO05D008916 4.5e-51 205.3 211 61.1
CANSAT80G0297 Cannabis sativa HOM05D007021 ORTHO05D008916 1.0e-50 204.1 196 63.3
TAR623G0728 Trochodendron aralioides HOM05D007021 ORTHO05D008916 1.7e-50 203.4 152 72.4
CANSAT80G1746 Cannabis sativa HOM05D007021 ORTHO05D008916 2.9e-50 202.6 196 62.8
Gohir.A09G174900 Gossypium hirsutum HOM05D007021 ORTHO05D008916 2.9e-50 202.6 133 82.7
Gohir.D09G170185 Gossypium hirsutum HOM05D007021 ORTHO05D008916 2.9e-50 202.6 133 82.7
Gorai.006G191500 Gossypium raimondii HOM05D007021 ORTHO05D008916 2.9e-50 202.6 133 82.7
Hma1.2p1_0163F.1_g073000 Hydrangea macrophylla HOM05D007021 ORTHO05D008916 3.8e-50 202.2 199 58.8
Eucgr.K02276 Eucalyptus grandis HOM05D007021 ORTHO05D008916 4.9e-50 201.8 199 63.8
FAN08G1321 Fragaria x ananassa HOM05D007021 ORTHO05D008916 1.4e-49 200.3 219 58.9
TWI81G0868 Tripterygium wilfordii HOM05D007021 ORTHO05D008916 1.4e-49 200.3 216 56.9
MSTRG.11303 Avicennia marina HOM05D007021 ORTHO05D008916 1.9e-49 199.9 203 57.6
Nn7g37125 Nelumbo nucifera HOM05D007021 ORTHO05D008916 2.5e-49 199.5 152 72.4
Thecc.03G058600 Theobroma cacao HOM05D007021 ORTHO05D008916 2.5e-49 199.5 126 83.3
Aqoxy1G00082 Aquilegia oxysepala HOM05D007021 ORTHO05D008916 4.2e-49 198.7 146 72.6
COL.COLO4_28897 Corchorus olitorius HOM05D007021 ORTHO05D008916 5.5e-49 198.4 133 81.2
FAN04G2374 Fragaria x ananassa HOM05D007021 ORTHO05D008916 5.5e-49 198.4 219 58.9
Manes.06G004800 Manihot esculenta HOM05D007021 ORTHO05D008916 5.5e-49 198.4 131 81.7
FvH4_5g17480 Fragaria vesca HOM05D007021 ORTHO05D008916 7.1e-49 198.0 219 58.4
FAN18G1853 Fragaria x ananassa HOM05D007021 ORTHO05D008916 7.1e-49 198.0 219 58.4
Sabra15G0029900 Salix brachista HOM05D007021 ORTHO05D008916 9.3e-49 197.6 209 57.9
MD06G1228200 Malus domestica HOM05D007021 ORTHO05D008916 1.6e-48 196.8 141 75.9
RcHm_v2.0_Chr7g0178211 Rosa chinensis HOM05D007021 ORTHO05D008916 1.6e-48 196.8 217 57.1
Gorai.003G035100 Gossypium raimondii HOM05D007021 ORTHO05D008916 4.6e-48 195.3 133 80.5
Cpa.g.sc3.381 Carica papaya HOM05D007021 ORTHO05D008916 6.0e-48 194.9 240 51.7
ClCG06G014200 Citrullus lanatus HOM05D007021 ORTHO05D008916 6.0e-48 194.9 217 57.1
Glyma.05G246900 Glycine max HOM05D007021 ORTHO05D008916 6.0e-48 194.9 206 58.3
Sopen05g002370 Solanum pennellii HOM05D007021 ORTHO05D008916 1.3e-47 193.7 200 58.5
Gohir.D03G033500 Gossypium hirsutum HOM05D007021 ORTHO05D008916 1.8e-47 193.4 133 78.9
Gohir.D08G085600 Gossypium hirsutum HOM05D007021 ORTHO05D008916 1.8e-47 193.4 133 78.9
Gorai.004G090100 Gossypium raimondii HOM05D007021 ORTHO05D008916 2.3e-47 193.0 133 78.2
Solyc05g006440.4 Solanum lycopersicum HOM05D007021 ORTHO05D008916 3.0e-47 192.6 205 58.0
HPP92_019433 Vanilla planifolia HOM05D007021 ORTHO05D008916 5.1e-47 191.8 127 78.7
HanXRQChr15g0486591 Helianthus annuus HOM05D007021 ORTHO05D008916 6.7e-47 191.4 137 73.0
Lj9A418T22 Lonicera japonica HOM05D007021 ORTHO05D008916 8.7e-47 191.0 180 61.7
Migut.I00268 Erythranthe guttata HOM05D007021 ORTHO05D008916 1.1e-46 190.7 150 69.3
Lalb_Chr05g0221591 Lupinus albus HOM05D007021 ORTHO05D008916 1.9e-46 189.9 130 77.7
Rhsim12G0138000 Rhododendron simsii HOM05D007021 ORTHO05D008916 3.3e-46 189.1 133 80.5
PGSC0003DMG400022612 Solanum tuberosum HOM05D007021 ORTHO05D008916 3.3e-46 189.1 136 75.7
C05p48360 Brassica napus HOM05D007021 ORTHO05D008916 4.3e-46 188.7 202 56.9
FAN13G1201 Fragaria x ananassa HOM05D007021 ORTHO05D008916 7.4e-46 188.0 143 74.8
CAN.G159.4 Capsicum annuum HOM05D007021 ORTHO05D008916 9.6e-46 187.6 114 86.8
Aa31LG8G4800 Aethionema arabicum HOM05D007021 ORTHO05D008916 1.3e-45 187.2 160 63.1
Nitab4.5_0002312g0020 Nicotiana tabacum HOM05D007021 ORTHO05D008916 1.3e-45 187.2 141 73.0
Phvul.002G331000 Phaseolus vulgaris HOM05D007021 ORTHO05D008916 1.6e-45 186.8 203 55.2
CsaV3_1G004470 Cucumis sativus L. HOM05D007021 ORTHO05D008916 2.1e-45 186.4 214 55.6
Nitab4.5_0004119g0020 Nicotiana tabacum HOM05D007021 ORTHO05D008916 2.8e-45 186.0 141 73.0
Sed0001257 Sechium edule HOM05D007021 ORTHO05D008916 2.8e-45 186.0 212 57.1
Glyma.08G055300 Glycine max HOM05D007021 ORTHO05D008916 3.7e-45 185.7 121 81.8
PSO339G6055 Papaver somniferum HOM05D007021 ORTHO05D008916 3.7e-45 185.7 186 59.7
arahy.Tifrunner.gnm1.ann1.2FQ1SS Arachis hypogaea HOM05D007021 ORTHO05D008916 6.3e-45 184.9 107 90.7
MELO3C017374.2 Cucumis melo HOM05D007021 ORTHO05D008916 6.3e-45 184.9 212 56.6
Lsat_1_v5_gn_8_115881 Lactuca sativa HOM05D007021 ORTHO05D008916 8.2e-45 184.5 202 55.9
BcaB06g25855 Brassica carinata HOM05D007021 ORTHO05D008916 1.1e-44 184.1 192 57.3
arahy.Tifrunner.gnm1.ann1.I2I16V Arachis hypogaea HOM05D007021 ORTHO05D008916 2.4e-44 183.0 107 89.7
Cc04_g06110 Coffea canephora HOM05D007021 ORTHO05D008916 2.4e-44 183.0 111 87.4
Oeu046158.1 Olea europaea HOM05D007021 ORTHO05D008916 2.4e-44 183.0 112 84.8
VMungo0251G3404 Vigna mungo HOM05D007021 ORTHO05D008916 2.4e-44 183.0 204 58.3
ECA232G1431 Erigeron canadensis HOM05D000006 ORTHO05D000091 4.1e-44 182.2 114 83.3
Lj4g0002555 Lotus japonicus HOM05D007021 ORTHO05D008916 9.0e-44 181.0 121 79.3
MBI13_g41749_MAGBIO Magnolia biondii HOM05D007021 ORTHO05D008916 9.0e-44 181.0 114 81.6
ATR1096G089 Amborella trichopoda HOM05D007021 ORTHO05D008916 1.2e-43 180.6 129 72.9
Zm00001eb150510 Zea mays HOM05D007021 ORTHO05D008916 1.5e-43 180.3 122 76.2
Haze_18883 Corylus avellana HOM05D007021 ORTHO05D008916 2.0e-43 179.9 167 64.1
Sc04g0004860 Simmondsia chinensis HOM05D007021 ORTHO05D008916 2.0e-43 179.9 166 62.0
BcaC05g28735 Brassica carinata HOM05D007021 ORTHO05D008916 4.5e-43 178.7 202 54.5
BolC5t33573H Brassica oleracea HOM05D007021 ORTHO05D008916 4.5e-43 178.7 202 54.5
Thhalv10021570m.g Eutrema salsugineum HOM05D007021 ORTHO05D008916 4.5e-43 178.7 202 57.4
Psat7g001280 Pisum sativum HOM05D007021 ORTHO05D008916 4.5e-43 178.7 107 86.9
PSO384G2008 Papaver somniferum HOM05D007021 ORTHO05D008916 5.9e-43 178.3 118 80.5
CARHR093260 Cardamine hirsuta HOM05D007021 ORTHO05D008916 7.6e-43 177.9 200 56.0
unitig_899.g15339 Utricularia gibba HOM05D007021 ORTHO05D008916 7.6e-43 177.9 123 78.9
A05p31870 Brassica napus HOM05D007021 ORTHO05D008916 2.2e-42 176.4 202 54.5
BraA05t22019Z Brassica rapa HOM05D007021 ORTHO05D008916 2.2e-42 176.4 202 54.5
THA.LOC104821829 Tarenaya hassleriana HOM05D007021 ORTHO05D008916 2.2e-42 176.4 204 54.4
Sp3g16050 Schrenkiella parvula HOM05D007021 ORTHO05D008916 8.5e-42 174.5 201 53.2
SEGI_41594 Sequoiadendron giganteum HOM05D007021 ORTHO05D008916 8.5e-42 174.5 130 71.5
TPR.G1394 Trifolium pratense HOM05D007021 ORTHO05D008916 8.5e-42 174.5 107 85.0
Medtr8g107430 Medicago truncatula HOM05D007021 ORTHO05D008916 3.2e-41 172.6 107 84.1
Os01g0805200 Oryza sativa ssp. japonica HOM05D007021 ORTHO05D008916 3.2e-41 172.6 108 81.5
Carub.0003s1766 Capsella rubella HOM05D007021 ORTHO05D008916 4.2e-41 172.2 106 84.0
Hund08707 Selenicereus undatus HOM05D007021 ORTHO05D008916 4.2e-41 172.2 113 77.9
AL3G31100 Arabidopsis lyrata HOM05D007021 ORTHO05D008916 7.2e-41 171.4 106 83.0
AT3G17930 Arabidopsis thaliana HOM05D007021 ORTHO05D008916 7.2e-41 171.4 106 83.0
Pp3c5_23310 Physcomitrium patens HOM05D007021 ORTHO05D008916 4.6e-40 168.7 201 51.2
CDE04G1339 Ceratophyllum demersum HOM05D000015 ORTHO05D002445 1.0e-39 167.5 128 68.0
EL10Ac8g19152 Beta vulgaris HOM05D007021 ORTHO05D008916 2.3e-39 166.4 113 77.0
AagrBONN_evm.TU.Sc2ySwM_117.710 Anthoceros agrestis HOM05D007021 ORTHO05D008916 8.2e-37 157.9 156 57.1
AagrBONN_evm.TU.Sc2ySwM_340.579 Anthoceros agrestis HOM05D007021 ORTHO05D008916 1.8e-36 156.8 156 56.4
Gohir.1Z049463 Gossypium hirsutum HOM05D007021 ORTHO05D008916 4.1e-36 155.6 133 70.7
Mapoly0023s0040 Marchantia polymorpha HOM05D007021 ORTHO05D008916 6.9e-36 154.8 151 57.0
SMO353G0175 Selaginella moellendorffii HOM05D007021 ORTHO05D008916 6.9e-36 154.8 134 61.2
CDE07G1635 Ceratophyllum demersum HOM05D007021 ORTHO05D008916 9.4e-33 144.4 100 73.0
Duzib068G0088 Durio zibethinus HOM05D007021 ORTHO05D008916 9.4e-33 144.4 91 84.6
DCAR_014390 Daucus carota HOM05D007021 ORTHO05D008916 6.1e-32 141.7 89 85.4
Peaxi162Scf00828g00016 Petunia axillaris HOM05D007021 ORTHO05D008916 3.0e-31 139.4 86 86.0
CBR_g48186 Chara braunii HOM05D007021 ORTHO05D008916 5.7e-30 135.2 105 63.8
AUR62025165 Chenopodium quinoa HOM05D007021 ORTHO05D008916 1.8e-28 130.2 86 77.9
AUR62029014 Chenopodium quinoa HOM05D007021 ORTHO05D008916 1.8e-28 130.2 86 77.9
Cre01.g000850 Chlamydomonas reinhardtii HOM05D007021 ORTHO05D008916 4.7e-24 115.5 119 50.4
MD14G1237400 Malus domestica HOM05D007021 ORTHO05D008916 1.2e-19 100.9 94 62.8
Oeu010907.1 Olea europaea HOM05D007021 ORTHO05D008916 1.7e-18 97.1 53 88.7
MCO16G182 Micromonas commoda HOM05D007021 ORTHO05D008916 3.2e-17 92.8 86 54.7
PRCOL_00000692 Prasinoderma coloniale HOM05D007021 ORTHO05D008916 7.2e-17 91.7 102 50.0


User provided reference genes

Program Settings