Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGR044G2090 Punica granatum HOM05D007333 ORTHO05D008874 6.8e-72 273.9 135 100.0
Eucgr.J01027 Eucalyptus grandis HOM05D007333 ORTHO05D008874 5.1e-27 124.8 140 52.9
Prupe.2G091100 Prunus persica HOM05D007333 ORTHO05D008874 8.7e-27 124.0 133 51.9
CiPaw.14G027900 Carya illinoinensis HOM05D007333 ORTHO05D008874 1.5e-26 123.2 138 50.7
Potri.010G233400 Populus trichocarpa HOM05D007333 ORTHO05D008874 3.4e-23 112.1 138 44.9
Manes.10G054600 Manihot esculenta HOM05D007333 ORTHO05D008874 9.9e-23 110.5 146 45.2
Ciclev10032982m.g Citrus clementina HOM05D007333 ORTHO05D008874 1.3e-22 110.2 150 42.0
Thecc.10G097500 Theobroma cacao HOM05D007333 ORTHO05D008874 6.4e-22 107.8 138 45.7
Manes.07G092300 Manihot esculenta HOM05D007333 ORTHO05D008874 7.1e-21 104.4 146 41.8
CANSAT56G1926 Cannabis sativa HOM05D007333 ORTHO05D008874 9.3e-21 104.0 140 45.7
TWI38G1382 Tripterygium wilfordii HOM05D007333 ORTHO05D008874 1.6e-20 103.2 143 42.7
TWI63G0473 Tripterygium wilfordii HOM05D007333 ORTHO05D008874 2.1e-20 102.8 154 44.2
GSVIVG01034686001 Vitis vinifera HOM05D007333 ORTHO05D008874 2.7e-20 102.4 119 50.4
Dinv31280 Davidia involucrata HOM05D007333 ORTHO05D008874 3.5e-20 102.1 144 46.5
FAN10G2394 Fragaria x ananassa HOM05D007333 ORTHO05D008874 7.9e-20 100.9 133 45.9
Cpa.g.sc128.62 Carica papaya HOM05D007333 ORTHO05D008874 1.0e-19 100.5 114 48.2
THA.LOC104823559 Tarenaya hassleriana HOM05D007333 ORTHO05D008874 1.3e-19 100.1 115 51.3
Gohir.D05G290801 Gossypium hirsutum HOM05D007333 ORTHO05D008874 1.8e-19 99.8 137 40.1
FAN03G1611 Fragaria x ananassa HOM05D007333 ORTHO05D008874 2.3e-19 99.4 133 45.1
FAN06G2923 Fragaria x ananassa HOM05D007333 ORTHO05D008874 2.3e-19 99.4 133 45.1
Gorai.009G305900 Gossypium raimondii HOM05D007333 ORTHO05D008874 2.3e-19 99.4 137 40.1
RcHm_v2.0_Chr1g0334731 Rosa chinensis HOM05D007333 ORTHO05D008874 2.3e-19 99.4 133 45.1
BolC8t50364H Brassica oleracea HOM05D007333 ORTHO05D008874 3.0e-19 99.0 138 42.8
FAN01G0324 Fragaria x ananassa HOM05D007333 ORTHO05D008874 3.9e-19 98.6 133 45.1
AL5G32820 Arabidopsis lyrata HOM05D007333 ORTHO05D008874 5.1e-19 98.2 123 43.1
Duzib114G0443 Durio zibethinus HOM05D007333 ORTHO05D008874 5.1e-19 98.2 137 45.3
BcaC07g39593 Brassica carinata HOM05D007333 ORTHO05D008874 6.7e-19 97.8 137 42.3
C08p27470 Brassica napus HOM05D007333 ORTHO05D008874 1.5e-18 96.7 137 42.3
Gohir.A05G289401 Gossypium hirsutum HOM05D007333 ORTHO05D008874 5.6e-18 94.7 137 39.4
Duzib128G0626 Durio zibethinus HOM05D007333 ORTHO05D008874 7.4e-18 94.4 143 41.3
Aa31LG10G7320 Aethionema arabicum HOM05D007333 ORTHO05D008874 1.3e-17 93.6 131 40.5
Carub.0005s1859 Capsella rubella HOM05D007333 ORTHO05D008874 2.1e-17 92.8 132 43.9
Atru.chr12.950 Acer truncatum HOM05D007333 ORTHO05D008874 4.8e-17 91.7 137 41.6
Sabra10G0181000 Salix brachista HOM05D007333 ORTHO05D008874 6.2e-17 91.3 158 36.7
BraA09t39992Z Brassica rapa HOM05D007333 ORTHO05D008874 8.1e-17 90.9 110 44.5
AT3G52230 Arabidopsis thaliana HOM05D007333 ORTHO05D008874 1.1e-16 90.5 128 40.6
A09p45290 Brassica napus HOM05D007333 ORTHO05D008874 1.1e-16 90.5 110 44.5
Sp5g10030 Schrenkiella parvula HOM05D007333 ORTHO05D008874 1.1e-16 90.5 105 46.7
CARHR162000 Cardamine hirsuta HOM05D007333 ORTHO05D008874 4.0e-16 88.6 115 42.6
ClCG08G008020 Citrullus lanatus HOM05D007333 ORTHO05D008874 5.3e-16 88.2 108 45.4
Ca_10485_v3 Cicer arietinum L. HOM05D007333 ORTHO05D008874 2.0e-15 86.3 116 44.0
COL.COLO4_34172 Corchorus olitorius HOM05D007333 ORTHO05D008874 2.0e-15 86.3 119 37.8
Lj5g0012880 Lotus japonicus HOM05D007333 ORTHO05D008874 2.0e-15 86.3 139 41.0
Sc20g0001370 Simmondsia chinensis HOM05D007333 ORTHO05D008874 2.0e-15 86.3 129 39.5
CsaV3_2G032900 Cucumis sativus L. HOM05D007333 ORTHO05D008874 5.8e-15 84.7 112 44.6
TAR633G0429 Trochodendron aralioides HOM05D007333 ORTHO05D008874 5.8e-15 84.7 127 40.9
Haze_02631 Corylus avellana HOM05D007333 ORTHO05D008874 7.6e-15 84.3 126 46.0
MELO3C019874.2 Cucumis melo HOM05D007333 ORTHO05D008874 7.6e-15 84.3 112 44.6
Thhalv10010807m.g Eutrema salsugineum HOM05D007333 ORTHO05D008874 7.6e-15 84.3 109 43.1
Cc02_g10320 Coffea canephora HOM05D007333 ORTHO05D008874 9.9e-15 84.0 135 40.0
Nitab4.5_0003408g0030 Nicotiana tabacum HOM05D007333 ORTHO05D008874 9.9e-15 84.0 132 43.2
Sed0000251 Sechium edule HOM05D007333 ORTHO05D008874 9.9e-15 84.0 108 45.4
Oeu015044.1 Olea europaea HOM05D007333 ORTHO05D008874 2.2e-14 82.8 134 41.8
SalBow6G6510 Salvia bowleyana HOM05D007333 ORTHO05D008874 2.2e-14 82.8 128 40.6
Actinidia34782 Actinidia chinensis HOM05D007333 ORTHO05D008874 3.8e-14 82.0 135 41.5
Dinv20855 Davidia involucrata HOM05D007333 ORTHO05D008874 3.8e-14 82.0 140 37.9
A04p07130 Brassica napus HOM05D007333 ORTHO05D008874 1.1e-13 80.5 54 64.8
arahy.Tifrunner.gnm1.ann1.YB4FNL Arachis hypogaea HOM05D007333 ORTHO05D008874 1.4e-13 80.1 134 41.8
Cfa011213 Carpinus fangiana HOM05D018442 ORTHO05D020347 1.4e-13 80.1 102 48.0
Solyc11g007680.2 Solanum lycopersicum HOM05D007333 ORTHO05D008874 1.4e-13 80.1 94 47.9
Sopen11g003540 Solanum pennellii HOM05D007333 ORTHO05D008874 1.4e-13 80.1 94 47.9
Nitab4.5_0000593g0040 Nicotiana tabacum HOM05D007333 ORTHO05D008874 1.9e-13 79.7 128 41.4
Oeu030485.1 Olea europaea HOM05D007333 ORTHO05D008874 1.9e-13 79.7 125 42.4
Ah.06g184540 Amaranthus hybridus HOM05D007333 ORTHO05D008874 2.4e-13 79.3 112 38.4
arahy.Tifrunner.gnm1.ann1.N9I1MN Arachis hypogaea HOM05D007333 ORTHO05D008874 2.4e-13 79.3 134 43.3
Hma1.2p1_0567F.1_g180010 Hydrangea macrophylla HOM05D007333 ORTHO05D008874 3.2e-13 79.0 99 43.4
DCAR_019045 Daucus carota HOM05D007333 ORTHO05D008874 4.2e-13 78.6 116 41.4
Migut.F01662 Erythranthe guttata HOM05D007333 ORTHO05D008874 5.5e-13 78.2 134 38.1
Lalb_Chr06g0170141 Lupinus albus HOM05D007333 ORTHO05D008874 5.5e-13 78.2 141 40.4
MSTRG.408 Avicennia marina HOM05D007333 ORTHO05D008874 7.1e-13 77.8 102 44.1
PGSC0003DMG402027350 Solanum tuberosum HOM05D007333 ORTHO05D008874 7.1e-13 77.8 94 46.8
Lsat_1_v5_gn_8_23060 Lactuca sativa HOM05D007333 ORTHO05D008874 9.3e-13 77.4 110 42.7
Peaxi162Scf00398g00057 Petunia axillaris HOM05D007333 ORTHO05D008874 9.3e-13 77.4 87 44.8
Lalb_Chr21g0313181 Lupinus albus HOM05D007333 ORTHO05D008874 1.6e-12 76.6 124 37.1
Actinidia38900 Actinidia chinensis HOM05D007333 ORTHO05D008874 2.1e-12 76.3 136 39.7
HanXRQChr08g0218141 Helianthus annuus HOM05D007333 ORTHO05D008874 4.6e-12 75.1 91 47.3
QL04p040607 Quercus lobata HOM05D007333 ORTHO05D008874 4.6e-12 75.1 104 45.2
Aqoxy2G01500 Aquilegia oxysepala HOM05D007333 ORTHO05D008874 6.0e-12 74.7 139 37.4
HanXRQChr14g0456271 Helianthus annuus HOM05D007333 ORTHO05D008874 1.0e-11 73.9 117 36.8
Medtr1g492630 Medicago truncatula HOM05D007333 ORTHO05D008874 2.3e-11 72.8 102 42.2
ECA233G0976 Erigeron canadensis HOM05D007333 ORTHO05D008874 3.9e-11 72.0 118 39.0
Lsat_1_v5_gn_2_102881 Lactuca sativa HOM05D007333 ORTHO05D008874 3.9e-11 72.0 110 39.1
Medtr1g492600 Medicago truncatula HOM05D007333 ORTHO05D008874 3.9e-11 72.0 102 43.1
SEGI_06473 Sequoiadendron giganteum HOM05D007333 ORTHO05D008874 3.9e-11 72.0 55 60.0
vmacro10268 Vaccinium macrocarpon HOM05D007333 ORTHO05D008874 6.7e-11 71.2 138 37.7
Glyma.10G201500 Glycine max HOM05D007333 ORTHO05D008874 8.7e-11 70.9 119 42.9
SGA_v2.0_scaffold62G21322 Striga asiatica HOM05D007333 ORTHO05D008874 8.7e-11 70.9 144 38.2
Phvul.007G105600 Phaseolus vulgaris HOM05D007333 ORTHO05D008874 1.5e-10 70.1 118 39.0
ECA238G3189 Erigeron canadensis HOM05D007333 ORTHO05D008874 3.3e-10 68.9 95 37.9
MBI17_g20230_MAGBIO Magnolia biondii HOM05D007333 ORTHO05D008874 3.3e-10 68.9 77 49.4
VMungo0720G1448 Vigna mungo HOM05D007333 ORTHO05D008874 7.4e-10 67.8 109 39.4
QL08p037183 Quercus lobata HOM05D018442 ORTHO05D020347 9.6e-10 67.4 94 44.7
TPR.G2540 Trifolium pratense HOM05D007333 ORTHO05D008874 1.3e-09 67.0 134 33.6
Glyma.20G188900 Glycine max HOM05D007333 ORTHO05D008874 6.2e-09 64.7 118 38.1
unitig_746.g26629 Utricularia gibba HOM05D007333 ORTHO05D008874 1.1e-08 63.9 144 34.0
Sed0004459 Sechium edule HOM05D027254 ORTHO05D028888 2.4e-08 62.8 62 45.2
Nn2g13958 Nelumbo nucifera HOM05D007333 ORTHO05D008874 3.1e-08 62.4 132 34.8
CSS0002382 Camellia sinensis var. sinensis HOM05D007333 ORTHO05D008874 4.0e-08 62.0 117 37.6
HPP92_009761 Vanilla planifolia HOM05D065211 ORTHO05D008874 1.2e-07 60.5 40 67.5
Psat6g175280 Pisum sativum HOM05D007333 ORTHO05D008874 1.5e-07 60.1 107 35.5
MELO3C012374.2 Cucumis melo HOM05D027254 ORTHO05D028888 2.0e-07 59.7 56 48.2
PSO339G5821 Papaver somniferum HOM05D007333 ORTHO05D008874 3.4e-07 58.9 84 41.7
Nn6g35090 Nelumbo nucifera HOM05D007333 ORTHO05D008874 1.0e-06 57.4 128 33.6
CsaV3_5G035720 Cucumis sativus L. HOM05D027254 ORTHO05D028888 2.2e-06 56.2 57 42.1
Ciclev10010649m.g Citrus clementina HOM05D007333 ORTHO05D008874 8.4e-06 54.3 106 35.8


User provided reference genes

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