Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGR044G2080 Punica granatum HOM05D006711 ORTHO05D008104 3.8e-41 171.0 84 100.0
Manes.14G068400 Manihot esculenta HOM05D006711 ORTHO05D008104 5.9e-34 147.1 82 89.0
FvH4_5g05020 Fragaria vesca HOM05D006711 ORTHO05D008104 3.0e-33 144.8 82 86.6
FAN04G0211 Fragaria x ananassa HOM05D006711 ORTHO05D008104 3.0e-33 144.8 82 86.6
FAN08G2471 Fragaria x ananassa HOM05D006711 ORTHO05D008104 3.0e-33 144.8 82 86.6
FAN18G2156 Fragaria x ananassa HOM05D006711 ORTHO05D008104 3.0e-33 144.8 82 86.6
Cfa019085 Carpinus fangiana HOM05D006711 ORTHO05D008104 5.0e-33 144.1 80 87.5
FAN13G1278 Fragaria x ananassa HOM05D006711 ORTHO05D008104 6.6e-33 143.7 82 85.4
FAN18G1479 Fragaria x ananassa HOM05D006711 ORTHO05D008104 6.6e-33 143.7 82 85.4
Medtr4g106700 Medicago truncatula HOM05D006711 ORTHO05D008104 4.3e-32 141.0 81 82.7
Potri.012G078000 Populus trichocarpa HOM05D006711 ORTHO05D008104 1.6e-31 139.0 81 84.0
Potri.015G073300 Populus trichocarpa HOM05D006711 ORTHO05D008104 1.6e-31 139.0 81 84.0
MD06G1177900 Malus domestica HOM05D006711 ORTHO05D008104 3.6e-31 137.9 82 81.7
Sabra15G0097500 Salix brachista HOM05D006711 ORTHO05D008104 4.7e-31 137.5 81 81.5
ClCG01G014050 Citrullus lanatus HOM05D006711 ORTHO05D008104 6.2e-31 137.1 82 81.7
Thecc.03G007500 Theobroma cacao HOM05D006711 ORTHO05D008104 6.2e-31 137.1 80 85.0
MD14G1184500 Malus domestica HOM05D006711 ORTHO05D008104 1.1e-30 136.3 81 81.5
CsaV3_1G008300 Cucumis sativus L. HOM05D006711 ORTHO05D008104 1.4e-30 136.0 82 80.5
Ca_21901_v3 Cicer arietinum L. HOM05D006711 ORTHO05D008104 1.8e-30 135.6 80 82.5
Gohir.A12G275900 Gossypium hirsutum HOM05D006711 ORTHO05D008104 2.3e-30 135.2 82 81.7
Gohir.D12G276600 Gossypium hirsutum HOM05D006711 ORTHO05D008104 2.3e-30 135.2 82 81.7
Gorai.008G297100 Gossypium raimondii HOM05D006711 ORTHO05D008104 2.3e-30 135.2 82 81.7
Aa31LG4G16690 Aethionema arabicum HOM05D006711 ORTHO05D008104 4.0e-30 134.4 81 80.2
AL5G27360 Arabidopsis lyrata HOM05D006711 ORTHO05D008104 4.0e-30 134.4 81 80.2
CARHR156770 Cardamine hirsuta HOM05D006711 ORTHO05D008104 4.0e-30 134.4 81 80.2
COL.COLO4_24770 Corchorus olitorius HOM05D006711 ORTHO05D008104 4.0e-30 134.4 80 85.0
Duzib084G0075 Durio zibethinus HOM05D006711 ORTHO05D008104 4.0e-30 134.4 82 81.7
Thhalv10010870m.g Eutrema salsugineum HOM05D006711 ORTHO05D008104 5.2e-30 134.0 81 79.0
THA.LOC104821460 Tarenaya hassleriana HOM05D006711 ORTHO05D008104 5.2e-30 134.0 81 82.7
MELO3C002246.2 Cucumis melo HOM05D006711 ORTHO05D008104 6.8e-30 133.7 82 79.3
Eucgr.K02867 Eucalyptus grandis HOM05D006711 ORTHO05D008104 6.8e-30 133.7 80 82.5
THA.LOC104798980 Tarenaya hassleriana HOM05D000086 ORTHO05D008104 6.8e-30 133.7 83 79.5
Sabra12G0055800 Salix brachista HOM05D006711 ORTHO05D008104 8.9e-30 133.3 81 80.2
Sp5g13950 Schrenkiella parvula HOM05D006711 ORTHO05D008104 8.9e-30 133.3 81 79.0
Prupe.5G177100 Prunus persica HOM05D006711 ORTHO05D008104 1.2e-29 132.9 82 79.3
Duzib068G0631 Durio zibethinus HOM05D006711 ORTHO05D008104 1.5e-29 132.5 80 82.5
Psat4g057240 Pisum sativum HOM05D006711 ORTHO05D008104 1.5e-29 132.5 81 79.0
Cpa.g.sc134.10 Carica papaya HOM05D006711 ORTHO05D008104 2.6e-29 131.7 76 82.9
BcaC07g39289 Brassica carinata HOM05D006711 ORTHO05D008104 3.4e-29 131.3 77 81.8
A06p19610 Brassica napus HOM05D006711 ORTHO05D008104 3.4e-29 131.3 77 81.8
C08p22960 Brassica napus HOM05D006711 ORTHO05D008104 3.4e-29 131.3 77 81.8
BolC8t49933H Brassica oleracea HOM05D006711 ORTHO05D008104 3.4e-29 131.3 77 81.8
BraA06t25041Z Brassica rapa HOM05D006711 ORTHO05D008104 3.4e-29 131.3 77 81.8
Sed0004980 Sechium edule HOM05D006711 ORTHO05D008104 4.4e-29 131.0 78 79.5
TWI15G0492 Tripterygium wilfordii HOM05D006711 ORTHO05D008104 5.8e-29 130.6 78 82.1
Lj4g0001750 Lotus japonicus HOM05D006711 ORTHO05D008104 7.5e-29 130.2 79 81.0
Aa31LG11G810 Aethionema arabicum HOM05D006711 ORTHO05D008104 9.8e-29 129.8 81 77.8
BcaB01g00848 Brassica carinata HOM05D006711 ORTHO05D008104 9.8e-29 129.8 77 80.5
Hund09419 Selenicereus undatus HOM05D006711 ORTHO05D008104 9.8e-29 129.8 75 86.7
TPR.G37552 Trifolium pratense HOM05D006711 ORTHO05D008104 1.3e-28 129.4 78 79.5
Sc04g0001970 Simmondsia chinensis HOM05D006711 ORTHO05D008104 2.2e-28 128.6 75 85.3
arahy.Tifrunner.gnm1.ann1.5NY27E Arachis hypogaea HOM05D006711 ORTHO05D008104 4.9e-28 127.5 80 78.8
AUR62031000 Chenopodium quinoa HOM05D006711 ORTHO05D008104 4.9e-28 127.5 75 84.0
Ciclev10023110m.g Citrus clementina HOM05D006711 ORTHO05D008104 4.9e-28 127.5 80 78.8
Atru.chr9.2428 Acer truncatum HOM05D006711 ORTHO05D008104 6.4e-28 127.1 80 77.5
EL10Ac5g10797 Beta vulgaris HOM05D006711 ORTHO05D008104 6.4e-28 127.1 75 82.7
Ah.10g035450 Amaranthus hybridus HOM05D006711 ORTHO05D008104 1.4e-27 125.9 75 84.0
CiPaw.12G024900 Carya illinoinensis HOM05D006711 ORTHO05D008104 9.2e-27 123.2 92 69.6
CANSAT11G1423 Cannabis sativa HOM05D006711 ORTHO05D008104 1.2e-26 122.9 80 72.5
Glyma.05G035600 Glycine max HOM05D006711 ORTHO05D008104 1.6e-26 122.5 70 84.3
Phvul.003G198200 Phaseolus vulgaris HOM05D006711 ORTHO05D008104 2.0e-26 122.1 75 80.0
PSO832G1815 Papaver somniferum HOM05D006711 ORTHO05D008104 1.3e-25 119.4 80 71.2
MBI15_g24174_MAGBIO Magnolia biondii HOM05D006711 ORTHO05D008104 1.7e-25 119.0 68 86.8
SalBow6G5258 Salvia bowleyana HOM05D006711 ORTHO05D008104 1.7e-25 119.0 75 80.0
Hma1.2p1_0697F.1_g204840 Hydrangea macrophylla HOM05D006711 ORTHO05D008104 3.0e-25 118.2 75 78.7
Migut.N03365 Erythranthe guttata HOM05D006711 ORTHO05D008104 3.9e-25 117.9 75 78.7
PSO063G1690 Papaver somniferum HOM05D006711 ORTHO05D008104 5.0e-25 117.5 75 74.7
PSO478G1559 Papaver somniferum HOM05D006711 ORTHO05D008104 5.0e-25 117.5 75 78.7
Aqoxy3G00948 Aquilegia oxysepala HOM05D006711 ORTHO05D008104 8.6e-25 116.7 76 80.3
Oeu059193.1 Olea europaea HOM05D006711 ORTHO05D008104 8.6e-25 116.7 75 77.3
Oeu047317.1 Olea europaea HOM05D006711 ORTHO05D008104 1.1e-24 116.3 75 76.0
DCAR_011220 Daucus carota HOM05D006711 ORTHO05D008104 1.5e-24 115.9 75 76.0
Actinidia33966 Actinidia chinensis HOM05D006711 ORTHO05D008104 1.9e-24 115.5 75 77.3
Cc07_g02450 Coffea canephora HOM05D006711 ORTHO05D008104 1.9e-24 115.5 75 80.0
PSO017G6527 Papaver somniferum HOM05D006711 ORTHO05D008104 2.5e-24 115.2 75 78.7
ATR1149G012 Amborella trichopoda HOM05D006711 ORTHO05D008104 3.3e-24 114.8 75 80.0
Sed0016611 Sechium edule HOM05D006711 ORTHO05D008104 4.3e-24 114.4 82 70.7
vmacro05808 Vaccinium macrocarpon HOM05D006711 ORTHO05D008104 7.3e-24 113.6 75 77.3
AUR62008246 Chenopodium quinoa HOM05D001451 ORTHO05D008104 9.5e-24 113.2 68 82.4
HPP92_010905 Vanilla planifolia HOM05D006711 ORTHO05D008104 9.5e-24 113.2 75 74.7
HPP92_010907 Vanilla planifolia HOM05D006711 ORTHO05D008104 9.5e-24 113.2 75 74.7
GSVIVG01032507001 Vitis vinifera HOM05D006711 ORTHO05D008104 1.6e-23 112.5 75 72.0
Peaxi162Scf00429g00118 Petunia axillaris HOM05D006711 ORTHO05D008104 6.2e-23 110.5 77 68.8
GSVIVG01007800001 Vitis vinifera HOM05D006711 ORTHO05D008104 6.2e-23 110.5 68 80.9
CDE10G0118 Ceratophyllum demersum HOM05D001322 ORTHO05D001301 8.1e-23 110.2 67 79.1
Sopen11g029530 Solanum pennellii HOM05D006711 ORTHO05D008104 8.1e-23 110.2 77 68.8
Zm00001eb311470 Zea mays HOM05D006711 ORTHO05D008104 8.1e-23 110.2 73 75.3
CDE10G0426 Ceratophyllum demersum HOM05D006711 ORTHO05D008104 1.8e-22 109.0 67 77.6
Haze_07479 Corylus avellana HOM05D006711 ORTHO05D008104 1.8e-22 109.0 55 94.5
CiPaw.11G029900 Carya illinoinensis HOM05D006711 ORTHO05D008104 2.3e-22 108.6 67 80.6
RcHm_v2.0_Chr7g0194021 Rosa chinensis HOM05D006711 ORTHO05D008104 4.0e-22 107.8 57 93.0
Nitab4.5_0002792g0010 Nicotiana tabacum HOM05D006711 ORTHO05D008104 6.8e-22 107.1 75 69.3
Os09g0375900 Oryza sativa ssp. japonica HOM05D006711 ORTHO05D008104 6.8e-22 107.1 68 77.9
Lsat_1_v5_gn_4_181601 Lactuca sativa HOM05D006711 ORTHO05D008104 8.9e-22 106.7 70 75.7
HanXRQChr09g0265981 Helianthus annuus HOM05D006711 ORTHO05D008104 1.2e-21 106.3 70 75.7
Oeu006591.3 Olea europaea HOM05D006711 ORTHO05D008104 1.5e-21 105.9 98 61.2
Nitab4.5_0004762g0010 Nicotiana tabacum HOM05D006711 ORTHO05D008104 2.0e-21 105.5 75 68.0
CAN.G742.33 Capsicum annuum HOM05D006711 ORTHO05D008104 2.6e-21 105.1 77 66.2
Carub.0005s1414 Capsella rubella HOM05D000086 ORTHO05D008104 5.8e-21 104.0 68 76.5
QL10p013547 Quercus lobata HOM05D006711 ORTHO05D008104 3.7e-20 101.3 149 43.0
unitig_46.g17997 Utricularia gibba HOM05D006711 ORTHO05D008104 4.9e-20 100.9 102 57.8
Lalb_Chr12g0201501 Lupinus albus HOM05D006711 ORTHO05D008104 6.4e-20 100.5 67 73.1
Eucgr.J02179 Eucalyptus grandis HOM05D006711 ORTHO05D008104 7.1e-19 97.1 67 68.7
HanXRQChr12g0385511 Helianthus annuus HOM05D006711 ORTHO05D008104 9.2e-19 96.7 68 69.1
TAR622G0690 Trochodendron aralioides HOM05D001464 ORTHO05D002836 7.8e-18 93.6 61 75.4
SEGI_30617 Sequoiadendron giganteum HOM05D006711 ORTHO05D008104 1.3e-17 92.8 68 66.2
PGSC0003DMG400003004 Solanum tuberosum HOM05D006711 ORTHO05D008104 6.6e-17 90.5 122 44.3
Nn4g22854 Nelumbo nucifera HOM05D006711 ORTHO05D008104 1.5e-16 89.4 60 73.3
Rhsim10G0024900 Rhododendron simsii HOM05D006711 ORTHO05D008104 3.3e-16 88.2 54 85.2
Rhsim10G0024700 Rhododendron simsii HOM05D006711 ORTHO05D008104 5.6e-16 87.4 51 86.3
CSS0024346 Camellia sinensis var. sinensis HOM05D006711 ORTHO05D008104 7.3e-16 87.0 51 84.3
Rhsim08G0056600 Rhododendron simsii HOM05D000086 ORTHO05D000983 2.8e-15 85.1 78 60.3
CBR_g49624 Chara braunii HOM05D006711 ORTHO05D008104 6.2e-15 84.0 65 64.6
Mapoly0124s0028 Marchantia polymorpha HOM05D006711 ORTHO05D008104 1.4e-14 82.8 67 64.2
ATR0661G003 Amborella trichopoda HOM05D006711 ORTHO05D008104 3.1e-14 81.6 68 66.2
Pp3c14_16830 Physcomitrium patens HOM05D006711 ORTHO05D008104 8.9e-14 80.1 72 56.9
ATR0820G148 Amborella trichopoda HOM05D006711 ORTHO05D008104 1.5e-13 79.3 67 65.7
PRCOL_00004863 Prasinoderma coloniale HOM05D006711 ORTHO05D008104 3.4e-13 78.2 77 50.6
AagrBONN_evm.TU.Sc2ySwM_368.1224 Anthoceros agrestis HOM05D006711 ORTHO05D008104 4.4e-13 77.8 62 67.7
Pp3c3_16770 Physcomitrium patens HOM05D006711 ORTHO05D008104 1.3e-12 76.3 62 66.1
Dinv35040 Davidia involucrata HOM05D006711 ORTHO05D008104 7.8e-10 67.0 39 87.2
HPP92_016979 Vanilla planifolia HOM05D006711 ORTHO05D008104 6.6e-09 63.9 34 94.1
Nn3g16941 Nelumbo nucifera HOM05D006711 ORTHO05D008104 1.6e-07 59.3 50 60.0
SHI34267 Sapria himalayana HOM05D006711 ORTHO05D008104 4.7e-07 57.8 34 85.3


User provided reference genes

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