Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGR044G1684 Punica granatum HOM05D005667 ORTHO05D007299 2.5e-215 751.9 397 100.0
Eucgr.K03468 Eucalyptus grandis HOM05D005667 ORTHO05D007299 9.3e-154 547.4 400 71.8
Dinv33042 Davidia involucrata HOM05D005667 ORTHO05D007299 3.7e-142 508.8 388 63.1
CiPaw.07G107100 Carya illinoinensis HOM05D005667 ORTHO05D007299 1.5e-140 503.4 389 66.8
Hma1.2p1_0209F.1_g088490 Hydrangea macrophylla HOM05D005667 ORTHO05D007299 1.0e-139 500.7 390 66.7
Atru.chr5.1169 Acer truncatum HOM05D005667 ORTHO05D007299 1.9e-138 496.5 389 63.0
Cfa005935 Carpinus fangiana HOM05D005667 ORTHO05D007299 3.2e-138 495.7 397 61.0
MD03G1286100 Malus domestica HOM05D005667 ORTHO05D007299 3.6e-137 492.3 387 61.2
MD11G1306000 Malus domestica HOM05D005667 ORTHO05D007299 6.1e-137 491.5 387 61.5
Lj1g0013419 Lotus japonicus HOM05D005667 ORTHO05D007299 1.0e-136 490.7 389 60.7
COL.COLO4_23365 Corchorus olitorius HOM05D005667 ORTHO05D007299 2.3e-136 489.6 393 64.1
Thecc.01G298400 Theobroma cacao HOM05D005667 ORTHO05D007299 5.1e-136 488.4 396 64.4
Duzib138G1280 Durio zibethinus HOM05D005667 ORTHO05D007299 5.7e-135 485.0 390 65.1
QL12p027280 Quercus lobata HOM05D005667 ORTHO05D007299 7.4e-135 484.6 395 59.5
TPR.G9636 Trifolium pratense HOM05D005667 ORTHO05D007299 7.4e-135 484.6 390 61.0
Psat3g021960 Pisum sativum HOM05D005667 ORTHO05D007299 9.7e-135 484.2 393 60.1
Haze_04910 Corylus avellana HOM05D005667 ORTHO05D007299 1.7e-134 483.4 428 56.8
QL12p026655 Quercus lobata HOM05D005667 ORTHO05D007299 2.2e-134 483.0 395 62.3
VMungo1383G3519 Vigna mungo HOM05D005667 ORTHO05D007299 2.8e-134 482.6 396 59.1
FvH4_2g25530 Fragaria vesca HOM05D005667 ORTHO05D007299 8.2e-134 481.1 392 58.7
CSS0019258 Camellia sinensis var. sinensis HOM05D005667 ORTHO05D007299 1.1e-133 480.7 387 66.7
CANSAT25G0856 Cannabis sativa HOM05D005667 ORTHO05D007299 1.8e-133 479.9 395 60.3
Phvul.001G206300 Phaseolus vulgaris HOM05D005667 ORTHO05D007299 1.8e-133 479.9 386 60.4
arahy.Tifrunner.gnm1.ann1.AQSE8X Arachis hypogaea HOM05D005667 ORTHO05D007299 3.1e-133 479.2 396 59.8
Glyma.03G213700 Glycine max HOM05D005667 ORTHO05D007299 4.1e-133 478.8 397 57.9
MSTRG.21625 Avicennia marina HOM05D005667 ORTHO05D007299 9.1e-133 477.6 396 64.9
Medtr7g108870 Medicago truncatula HOM05D005667 ORTHO05D007299 1.2e-132 477.2 387 60.5
Medtr8g058590 Medicago truncatula HOM05D005667 ORTHO05D007299 1.2e-132 477.2 387 60.5
Ciclev10020175m.g Citrus clementina HOM05D005667 ORTHO05D007299 2.0e-132 476.5 446 55.4
vmacro14998 Vaccinium macrocarpon HOM05D005667 ORTHO05D007299 2.6e-132 476.1 391 60.9
Lalb_Chr04g0259821 Lupinus albus HOM05D005667 ORTHO05D007299 3.5e-132 475.7 390 61.0
TAR365G0445 Trochodendron aralioides HOM05D005667 ORTHO05D007299 3.5e-132 475.7 389 60.4
Hund18138 Selenicereus undatus HOM05D005667 ORTHO05D007299 4.5e-132 475.3 391 59.3
arahy.Tifrunner.gnm1.ann1.P0XQ2X Arachis hypogaea HOM05D005667 ORTHO05D007299 1.0e-131 474.2 396 59.1
Ca_09151_v3 Cicer arietinum L. HOM05D005667 ORTHO05D007299 1.0e-131 474.2 392 58.4
MELO3C017966.2 Cucumis melo HOM05D005667 ORTHO05D007299 1.0e-131 474.2 393 59.3
Glyma.19G210500 Glycine max HOM05D005667 ORTHO05D007299 1.0e-131 474.2 397 57.4
TAR627G0762 Trochodendron aralioides HOM05D005667 ORTHO05D007299 1.3e-131 473.8 389 60.2
Actinidia32226 Actinidia chinensis HOM05D005667 ORTHO05D007299 2.9e-131 472.6 388 60.3
Nn4g25820 Nelumbo nucifera HOM05D005667 ORTHO05D007299 3.8e-131 472.2 388 59.5
Lalb_Chr18g0047071 Lupinus albus HOM05D005667 ORTHO05D007299 7.2e-130 468.0 395 58.2
CARHR143160 Cardamine hirsuta HOM05D005667 ORTHO05D007299 1.2e-129 467.2 397 61.7
Migut.D00204 Erythranthe guttata HOM05D005667 ORTHO05D007299 1.0e-128 464.2 396 63.9
TWI23G0451 Tripterygium wilfordii HOM05D005667 ORTHO05D007299 1.4e-128 463.8 386 60.1
SalBow3G0511 Salvia bowleyana HOM05D005667 ORTHO05D007299 2.3e-128 463.0 371 65.0
AT2G47790 Arabidopsis thaliana HOM05D005667 ORTHO05D007299 3.9e-128 462.2 398 58.3
CsaV3_4G000700 Cucumis sativus L. HOM05D005667 ORTHO05D007299 5.2e-128 461.8 393 57.8
TWI59G1070 Tripterygium wilfordii HOM05D005667 ORTHO05D007299 5.2e-128 461.8 398 59.5
AL4G47370 Arabidopsis lyrata HOM05D005667 ORTHO05D007299 3.3e-127 459.1 396 58.3
Nitab4.5_0002469g0040 Nicotiana tabacum HOM05D005667 ORTHO05D007299 3.3e-127 459.1 393 57.8
Gohir.D12G135100 Gossypium hirsutum HOM05D005667 ORTHO05D007299 9.7e-127 457.6 395 65.3
Carub.0004s3050 Capsella rubella HOM05D005667 ORTHO05D007299 2.8e-126 456.1 399 57.6
FAN20G0834 Fragaria x ananassa HOM05D005667 ORTHO05D007299 3.7e-126 455.7 395 56.5
DCAR_005798 Daucus carota HOM05D005667 ORTHO05D007299 2.4e-125 453.0 390 59.2
SGA_v2.0_scaffold2G01401 Striga asiatica HOM05D005667 ORTHO05D007299 3.1e-125 452.6 393 60.1
Lsat_1_v5_gn_8_53441 Lactuca sativa HOM05D005667 ORTHO05D007299 5.3e-125 451.8 401 61.6
Aa31LG1G29130 Aethionema arabicum HOM05D005667 ORTHO05D007299 9.1e-125 451.1 400 59.8
PGSC0003DMG400011397 Solanum tuberosum HOM05D005667 ORTHO05D007299 9.1e-125 451.1 393 58.3
Gohir.A12G131200 Gossypium hirsutum HOM05D005667 ORTHO05D007299 1.6e-124 450.3 399 64.9
HanXRQChr04g0118041 Helianthus annuus HOM05D005667 ORTHO05D007299 1.6e-124 450.3 389 59.6
Potri.014G130600 Populus trichocarpa HOM05D005667 ORTHO05D007299 2.6e-124 449.5 387 62.5
Sed0014922 Sechium edule HOM05D005667 ORTHO05D007299 2.6e-124 449.5 395 56.5
Potri.002G205600 Populus trichocarpa HOM05D005667 ORTHO05D007299 3.5e-124 449.1 386 61.7
Solyc09g075000.3 Solanum lycopersicum HOM05D005667 ORTHO05D007299 4.5e-124 448.7 388 58.5
Ah.08g213150 Amaranthus hybridus HOM05D005667 ORTHO05D007299 5.9e-124 448.4 396 57.1
Sopen09g029820 Solanum pennellii HOM05D005667 ORTHO05D007299 5.9e-124 448.4 388 58.8
Sc05g0004030 Simmondsia chinensis HOM05D005667 ORTHO05D007299 1.7e-123 446.8 396 57.6
Sp4g29720 Schrenkiella parvula HOM05D005667 ORTHO05D007299 2.2e-123 446.4 397 56.4
Aqoxy2G02973 Aquilegia oxysepala HOM05D005667 ORTHO05D007299 2.9e-123 446.0 401 60.8
Prupe.8G259400 Prunus persica HOM05D005667 ORTHO05D007299 3.8e-123 445.7 343 62.1
Manes.01G217700 Manihot esculenta HOM05D005667 ORTHO05D007299 6.5e-123 444.9 387 58.1
THA.LOC104817511 Tarenaya hassleriana HOM05D005667 ORTHO05D007299 1.1e-122 444.1 394 57.4
Thhalv10001494m.g Eutrema salsugineum HOM05D005667 ORTHO05D007299 8.0e-121 438.0 395 59.0
GSVIVG01027987001 Vitis vinifera HOM05D005667 ORTHO05D007299 1.8e-120 436.8 342 61.7
Gorai.008G146100 Gossypium raimondii HOM05D005667 ORTHO05D007299 8.8e-120 434.5 399 62.7
PSO170G6061 Papaver somniferum HOM05D005667 ORTHO05D007299 1.2e-119 434.1 395 60.0
PSO210G4429 Papaver somniferum HOM05D005667 ORTHO05D007299 1.5e-119 433.7 395 58.2
ATR0796G332 Amborella trichopoda HOM05D005667 ORTHO05D007299 2.6e-119 433.0 390 55.6
Sabra14G0097200 Salix brachista HOM05D005667 ORTHO05D007299 1.7e-118 430.3 383 63.7
CDE08G0318 Ceratophyllum demersum HOM05D005667 ORTHO05D007299 2.2e-118 429.9 386 57.3
AUR62008656 Chenopodium quinoa HOM05D005667 ORTHO05D007299 8.3e-118 427.9 392 55.4
Sabra02G0153700 Salix brachista HOM05D005667 ORTHO05D007299 8.3e-118 427.9 410 54.9
AUR62033112 Chenopodium quinoa HOM05D005667 ORTHO05D007299 1.1e-117 427.6 393 55.0
EL10Ac7g17451 Beta vulgaris HOM05D005667 ORTHO05D007299 2.0e-116 423.3 387 54.8
BcaB06g29498 Brassica carinata HOM05D005667 ORTHO05D007299 3.5e-116 422.5 411 56.0
C04p72980 Brassica napus HOM05D005667 ORTHO05D007299 1.7e-115 420.2 394 56.6
Cc01_g20730 Coffea canephora HOM05D005667 ORTHO05D007299 1.7e-115 420.2 444 49.5
Nitab4.5_0005515g0060 Nicotiana tabacum HOM05D005667 ORTHO05D007299 1.7e-115 420.2 393 53.9
Lj1C26T7 Lonicera japonica HOM05D005667 ORTHO05D007299 3.8e-115 419.1 331 60.4
A04p35070 Brassica napus HOM05D005667 ORTHO05D007299 6.5e-115 418.3 391 57.8
BolC4t28779H Brassica oleracea HOM05D005667 ORTHO05D007299 1.9e-114 416.8 392 57.1
BraA04t18943Z Brassica rapa HOM05D005667 ORTHO05D007299 4.2e-114 415.6 392 57.7
HPP92_027132 Vanilla planifolia HOM05D005667 ORTHO05D007299 2.7e-113 412.9 378 58.5
ClCG10G010830 Citrullus lanatus HOM05D005667 ORTHO05D007299 5.2e-112 408.7 393 54.2
unitig_0.g1174 Utricularia gibba HOM05D005667 ORTHO05D007299 3.4e-111 406.0 430 54.0
Peaxi162Scf00001g00492 Petunia axillaris HOM05D005667 ORTHO05D007299 1.7e-110 403.7 347 58.8
Hma1.2p1_0209F.1_g088500 Hydrangea macrophylla HOM05D005667 ORTHO05D007299 3.7e-110 402.5 430 53.0
BcaC02g06992 Brassica carinata HOM05D005667 ORTHO05D007299 5.4e-109 398.7 391 52.2
CSS0024566 Camellia sinensis var. sinensis HOM05D005667 ORTHO05D007299 2.8e-105 386.3 391 51.9
CSS0050073 Camellia sinensis var. sinensis HOM05D005667 ORTHO05D007299 6.8e-104 381.7 391 51.7
Rhsim01G0284200 Rhododendron simsii HOM05D005667 ORTHO05D007299 6.8e-104 381.7 392 52.0
Actinidia24829 Actinidia chinensis HOM05D005667 ORTHO05D007299 1.2e-103 380.9 388 53.1
SHI15190 Sapria himalayana HOM05D005667 ORTHO05D007299 5.4e-101 372.1 382 52.4
ECA236G1571 Erigeron canadensis HOM05D005667 ORTHO05D007299 1.9e-98 363.6 343 58.0
Dinv19706 Davidia involucrata HOM05D005667 ORTHO05D007299 6.8e-96 355.1 267 68.9
SEGI_23788 Sequoiadendron giganteum HOM05D005667 ORTHO05D007299 1.5e-95 354.0 403 46.4
Sc05g0001380 Simmondsia chinensis HOM05D005667 ORTHO05D007299 1.2e-92 344.4 304 56.9
Cpa.g.sc9.222 Carica papaya HOM05D005667 ORTHO05D007299 3.9e-91 339.3 290 61.7
Pp3c2_26100 Physcomitrium patens HOM05D005667 ORTHO05D007299 1.7e-83 313.9 378 51.9
Pp3c11_14960 Physcomitrium patens HOM05D005667 ORTHO05D007299 5.1e-83 312.4 377 49.1
Medtr8g058557 Medicago truncatula HOM05D005667 ORTHO05D007299 2.7e-76 290.0 233 61.4
SMO329G0065 Selaginella moellendorffii HOM05D005667 ORTHO05D007299 1.9e-74 283.9 350 46.9
RcHm_v2.0_Chr6g0293741 Rosa chinensis HOM05D005667 ORTHO05D007299 4.4e-71 272.7 202 60.4
Mapoly0153s0027 Marchantia polymorpha HOM05D005667 ORTHO05D007299 8.4e-70 268.5 391 39.4
BcaB06g29495 Brassica carinata HOM05D005667 ORTHO05D007299 7.8e-68 261.9 280 50.0
HPP92_021590 Vanilla planifolia HOM05D005667 ORTHO05D007299 1.6e-65 254.2 232 58.6
Nn3g21456 Nelumbo nucifera HOM05D005667 ORTHO05D007299 5.4e-61 239.2 316 42.1
Pp3c11_15090 Physcomitrium patens HOM05D005667 ORTHO05D007299 3.9e-59 233.0 299 41.1
Zm00001eb157470 Zea mays HOM05D005667 ORTHO05D007299 9.6e-50 201.8 203 50.2
Os12g0294100 Oryza sativa ssp. japonica HOM05D005667 ORTHO05D007299 3.1e-48 196.8 211 63.0
Oeu011452.2 Olea europaea HOM05D005667 ORTHO05D007299 1.9e-45 187.6 167 56.3
Actinidia21054 Actinidia chinensis HOM05D005667 ORTHO05D007299 1.2e-44 184.9 155 58.7
AagrBONN_evm.TU.Sc2ySwM_344.2785 Anthoceros agrestis HOM05D005667 ORTHO05D007299 2.7e-44 183.7 234 40.2
Cre03.g178050 Chlamydomonas reinhardtii HOM05D005667 ORTHO05D007299 9.6e-42 175.3 353 34.3
RcHm_v2.0_Chr6g0293751 Rosa chinensis HOM05D005667 ORTHO05D007299 1.8e-40 171.0 141 61.7
BcaC02g06993 Brassica carinata HOM05D005667 ORTHO05D007299 6.1e-36 156.0 122 62.3
PRCOL_00003266 Prasinoderma coloniale HOM05D005667 ORTHO05D007299 4.6e-28 129.8 364 29.7
MCO09G319 Micromonas commoda HOM05D005667 ORTHO05D007299 2.2e-25 120.9 380 29.2
CBR_g31107 Chara braunii HOM05D000019 ORTHO05D000048 2.0e-15 87.8 189 32.8
CBR_g34279 Chara braunii HOM05D005667 ORTHO05D007299 2.2e-14 84.3 161 31.7
Migut.D00125 Erythranthe guttata HOM05D005667 ORTHO05D007299 5.5e-13 79.7 177 33.3
Migut.G00109 Erythranthe guttata HOM05D005667 ORTHO05D007299 1.6e-12 78.2 66 56.1
CBR_g31109 Chara braunii HOM05D000019 ORTHO05D000048 1.1e-10 72.0 69 46.4
Actinidia13473 Actinidia chinensis HOM05D005667 ORTHO05D000474 5.9e-07 59.7 68 48.5


User provided reference genes

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