Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGR044G1646 Punica granatum HOM05D006264 ORTHO05D007739 6.9e-195 683.7 328 100.0
Glyma.06G115200 Glycine max HOM05D006264 ORTHO05D007739 2.9e-169 598.6 326 86.2
Thecc.08G126800 Theobroma cacao HOM05D006264 ORTHO05D007739 2.9e-169 598.6 326 86.8
Gohir.D06G045800 Gossypium hirsutum HOM05D006264 ORTHO05D007739 2.5e-168 595.5 319 88.1
Gorai.010G051000 Gossypium raimondii HOM05D006264 ORTHO05D007739 2.5e-168 595.5 319 88.1
Ciclev10001823m.g Citrus clementina HOM05D006264 ORTHO05D007739 4.2e-168 594.7 328 84.5
Phvul.009G127300 Phaseolus vulgaris HOM05D006264 ORTHO05D007739 1.2e-167 593.2 326 85.3
VMungo1309G2910 Vigna mungo HOM05D006264 ORTHO05D007739 1.6e-167 592.8 326 85.3
MELO3C010482.2 Cucumis melo HOM05D006264 ORTHO05D007739 3.6e-167 591.7 320 85.0
Glyma.04G247500 Glycine max HOM05D006264 ORTHO05D007739 6.1e-167 590.9 327 84.7
QL09p034323 Quercus lobata HOM05D006264 ORTHO05D007739 3.0e-166 588.6 327 82.9
Lj1g0001411 Lotus japonicus HOM05D006264 ORTHO05D007739 6.7e-166 587.4 318 85.2
CsaV3_4G028200 Cucumis sativus L. HOM05D006264 ORTHO05D007739 2.6e-165 585.5 329 82.4
Sed0004807 Sechium edule HOM05D006264 ORTHO05D007739 9.7e-165 583.6 328 82.6
arahy.Tifrunner.gnm1.ann1.YYE7NP Arachis hypogaea HOM05D006264 ORTHO05D007739 8.2e-164 580.5 326 83.1
Prupe.1G494700 Prunus persica HOM05D006264 ORTHO05D007739 8.2e-164 580.5 329 82.4
arahy.Tifrunner.gnm1.ann1.W8H4W4 Arachis hypogaea HOM05D006264 ORTHO05D007739 4.1e-163 578.2 326 82.8
THA.LOC104810199 Tarenaya hassleriana HOM05D006264 ORTHO05D007739 4.1e-163 578.2 328 82.3
Nn1g08814 Nelumbo nucifera HOM05D006264 ORTHO05D007739 7.0e-163 577.4 321 82.9
Sc02g0005000 Simmondsia chinensis HOM05D006264 ORTHO05D007739 7.0e-163 577.4 328 81.7
COL.COLO4_04990 Corchorus olitorius HOM05D006264 ORTHO05D007739 1.2e-162 576.6 321 84.4
Eucgr.F04347 Eucalyptus grandis HOM05D006264 ORTHO05D007739 1.2e-162 576.6 328 83.5
Medtr3g088580 Medicago truncatula HOM05D006264 ORTHO05D007739 2.0e-162 575.9 326 81.9
Lalb_Chr11g0066051 Lupinus albus HOM05D006264 ORTHO05D007739 5.9e-162 574.3 326 82.5
TAR381G1225 Trochodendron aralioides HOM05D006264 ORTHO05D007739 5.9e-162 574.3 328 81.4
Lalb_Chr08g0241301 Lupinus albus HOM05D006264 ORTHO05D007739 1.0e-161 573.5 328 81.1
CANSAT11G2315 Cannabis sativa HOM05D006264 ORTHO05D007739 1.3e-161 573.2 322 83.9
Ca_27657_v3 Cicer arietinum L. HOM05D006264 ORTHO05D007739 2.2e-161 572.4 327 82.6
Dinv27304 Davidia involucrata HOM05D006264 ORTHO05D007739 3.8e-161 571.6 320 81.6
Lj4C628G13 Lonicera japonica HOM05D006264 ORTHO05D007739 3.8e-161 571.6 329 80.5
Cc10_g12020 Coffea canephora HOM05D006264 ORTHO05D007739 1.1e-160 570.1 327 79.2
MD15G1347000 Malus domestica HOM05D006264 ORTHO05D007739 4.2e-160 568.2 328 80.8
CSS0035031 Camellia sinensis var. sinensis HOM05D006264 ORTHO05D007739 5.5e-160 567.8 328 80.2
Oeu040415.1 Olea europaea HOM05D006264 ORTHO05D007739 1.6e-159 566.2 320 80.6
FAN15G0088 Fragaria x ananassa HOM05D006264 ORTHO05D007739 2.7e-159 565.5 329 81.5
Solyc11g012830.3 Solanum lycopersicum HOM05D006264 ORTHO05D007739 2.7e-159 565.5 328 79.0
FAN24G2929 Fragaria x ananassa HOM05D006264 ORTHO05D007739 6.1e-159 564.3 321 82.6
PGSC0003DMG400000884 Solanum tuberosum HOM05D006264 ORTHO05D007739 6.1e-159 564.3 328 79.3
TAR625G1219 Trochodendron aralioides HOM05D006264 ORTHO05D007739 1.4e-158 563.1 328 79.3
FAN20G0424 Fragaria x ananassa HOM05D006264 ORTHO05D007739 2.3e-158 562.4 329 81.2
MSTRG.1441 Avicennia marina HOM05D006264 ORTHO05D007739 3.0e-158 562.0 318 80.5
Nitab4.5_0001996g0020 Nicotiana tabacum HOM05D006264 ORTHO05D007739 5.2e-158 561.2 325 78.2
RcHm_v2.0_Chr6g0295971 Rosa chinensis HOM05D006264 ORTHO05D007739 6.7e-158 560.8 328 81.1
Actinidia29470 Actinidia chinensis HOM05D006264 ORTHO05D007739 8.8e-158 560.5 322 78.6
CARHR022150 Cardamine hirsuta HOM05D006264 ORTHO05D007739 3.3e-157 558.5 329 78.1
Aa31LG7G5740 Aethionema arabicum HOM05D006264 ORTHO05D007739 4.4e-157 558.1 329 79.3
CAN.G2.26 Capsicum annuum HOM05D006264 ORTHO05D007739 7.5e-157 557.4 325 77.8
TWI60G1034 Tripterygium wilfordii HOM05D006264 ORTHO05D007739 1.7e-156 556.2 329 79.9
Hund17298 Selenicereus undatus HOM05D006264 ORTHO05D007739 3.7e-156 555.1 320 81.2
Sp1g19320 Schrenkiella parvula HOM05D006264 ORTHO05D007739 8.2e-156 553.9 329 77.5
ClCG11G015780 Citrullus lanatus HOM05D006264 ORTHO05D007739 1.1e-155 553.5 300 84.0
Aqoxy6G00234 Aquilegia oxysepala HOM05D006264 ORTHO05D007739 3.1e-155 552.0 318 80.8
AT1G21760 Arabidopsis thaliana HOM05D006264 ORTHO05D007739 3.1e-155 552.0 329 77.2
TPR.G13464 Trifolium pratense HOM05D006264 ORTHO05D007739 3.1e-155 552.0 326 80.4
BcaB07g32175 Brassica carinata HOM05D006264 ORTHO05D007739 7.0e-155 550.8 329 77.5
arahy.Tifrunner.gnm1.ann1.9W7Z3M Arachis hypogaea HOM05D006264 ORTHO05D007739 1.6e-154 549.7 334 78.1
Haze_00430 Corylus avellana HOM05D006264 ORTHO05D007739 2.7e-154 548.9 341 79.5
BcaC05g26098 Brassica carinata HOM05D006264 ORTHO05D007739 1.3e-153 546.6 329 77.2
BraA06t24877Z Brassica rapa HOM05D006264 ORTHO05D007739 6.5e-153 544.3 343 74.9
A06p17870 Brassica napus HOM05D006264 ORTHO05D007739 1.5e-152 543.1 345 74.2
BolC5t30776H Brassica oleracea HOM05D006264 ORTHO05D007739 4.2e-152 541.6 340 75.3
CiPaw.05G220800 Carya illinoinensis HOM05D006264 ORTHO05D007739 5.5e-152 541.2 328 78.4
Duzib093G0816 Durio zibethinus HOM05D006264 ORTHO05D007739 1.2e-151 540.0 325 80.3
EL10Ac1g01023 Beta vulgaris HOM05D006264 ORTHO05D007739 1.6e-151 539.7 322 77.6
FvH4_2g27090 Fragaria vesca HOM05D006264 ORTHO05D007739 2.7e-151 538.9 325 77.5
MBI16_g07653_MAGBIO Magnolia biondii HOM05D006264 ORTHO05D007739 8.0e-151 537.3 320 77.5
Carub.0001s2122 Capsella rubella HOM05D006264 ORTHO05D007739 1.4e-150 536.6 329 75.7
vmacro00839 Vaccinium macrocarpon HOM05D006264 ORTHO05D007739 2.3e-150 535.8 328 75.9
HanXRQChr05g0151071 Helianthus annuus HOM05D006264 ORTHO05D007739 1.5e-149 533.1 322 74.5
Peaxi162Scf00914g00315 Petunia axillaris HOM05D006264 ORTHO05D007739 2.2e-148 529.3 297 80.1
Migut.C01127 Erythranthe guttata HOM05D006264 ORTHO05D007739 8.3e-148 527.3 327 73.7
SGA_v2.0_scaffold24G10459 Striga asiatica HOM05D006264 ORTHO05D007739 1.8e-147 526.2 327 74.6
Rhsim11G0069200 Rhododendron simsii HOM05D006264 ORTHO05D007739 9.1e-147 523.9 331 73.4
AUR62014328 Chenopodium quinoa HOM05D006264 ORTHO05D007739 2.7e-146 522.3 328 75.3
C05p20770 Brassica napus HOM05D006264 ORTHO05D007739 4.5e-146 521.5 325 74.8
AUR62019071 Chenopodium quinoa HOM05D006264 ORTHO05D007739 1.3e-145 520.0 328 75.0
Manes.02G164400 Manihot esculenta HOM05D006264 ORTHO05D007739 1.5e-144 516.5 328 74.7
PSO170G1538 Papaver somniferum HOM05D006264 ORTHO05D007739 1.9e-144 516.2 305 77.0
PSO528G0109 Papaver somniferum HOM05D006264 ORTHO05D007739 1.9e-144 516.2 305 76.7
PSO063G0125 Papaver somniferum HOM05D006264 ORTHO05D007739 3.0e-142 508.8 305 76.1
CDE02G1850 Ceratophyllum demersum HOM05D006264 ORTHO05D007739 2.0e-141 506.1 310 72.3
ATR0584G291 Amborella trichopoda HOM05D006264 ORTHO05D007739 1.7e-140 503.1 315 73.7
Nitab4.5_0001803g0010 Nicotiana tabacum HOM05D006264 ORTHO05D007739 1.8e-139 499.6 312 74.4
Potri.005G178600 Populus trichocarpa HOM05D006264 ORTHO05D007739 4.5e-138 495.0 320 74.7
Lsat_1_v5_gn_6_112861 Lactuca sativa HOM05D006264 ORTHO05D007739 3.8e-137 491.9 327 70.3
Potri.002G082500 Populus trichocarpa HOM05D006264 ORTHO05D007739 5.0e-137 491.5 328 72.3
QL09p034368 Quercus lobata HOM05D006264 ORTHO05D007739 1.5e-133 479.9 253 86.6
THA.LOC104801868 Tarenaya hassleriana HOM05D006264 ORTHO05D007739 6.4e-132 474.6 255 86.7
GSVIVG01008855001 Vitis vinifera HOM05D006264 ORTHO05D007739 2.4e-131 472.6 328 70.7
HPP92_004401 Vanilla planifolia HOM05D006264 ORTHO05D007739 1.2e-130 470.3 328 66.5
HPP92_027807 Vanilla planifolia HOM05D006264 ORTHO05D007739 4.6e-130 468.4 321 67.0
AL1G34960 Arabidopsis lyrata HOM05D006264 ORTHO05D007739 5.2e-126 454.9 254 82.7
Thhalv10008543m.g Eutrema salsugineum HOM05D006264 ORTHO05D007739 1.7e-124 449.9 256 80.9
Pp3c3_38060 Physcomitrium patens HOM05D006264 ORTHO05D007739 2.2e-124 449.5 306 67.0
unitig_748.g7689 Utricularia gibba HOM05D006264 ORTHO05D007739 2.2e-124 449.5 317 67.2
Zm00001eb422580 Zea mays HOM05D006264 ORTHO05D007739 8.3e-124 447.6 321 63.6
SMO347G0097 Selaginella moellendorffii HOM05D006264 ORTHO05D007739 2.8e-119 432.6 309 65.0
Gohir.A06G045300 Gossypium hirsutum HOM05D006264 ORTHO05D007739 1.7e-116 423.3 230 84.3
Sabra02G0064700 Salix brachista HOM05D006264 ORTHO05D007739 8.3e-116 421.0 328 64.6
ECA246G2185 Erigeron canadensis HOM05D006264 ORTHO05D007739 4.1e-115 418.7 269 70.3
Mapoly0151s0012 Marchantia polymorpha HOM05D006264 ORTHO05D007739 8.1e-111 404.4 317 58.4
DCAR_028205 Daucus carota HOM05D006264 ORTHO05D007739 1.8e-110 403.3 254 74.4
AagrBONN_evm.TU.Sc2ySwM_117.473 Anthoceros agrestis HOM05D006264 ORTHO05D007739 2.3e-110 402.9 309 59.2
Atru.chr13.1491 Acer truncatum HOM05D006264 ORTHO05D007739 5.6e-104 381.7 218 84.9
Sopen11g007570 Solanum pennellii HOM05D006264 ORTHO05D007739 9.3e-99 364.4 198 85.9
CBR_g39544 Chara braunii HOM05D006264 ORTHO05D007739 2.9e-92 342.8 312 53.8
Psat5g086280 Pisum sativum HOM05D006264 ORTHO05D007739 3.7e-79 299.3 166 78.9
Cpa.g.c35582 Carica papaya HOM05D006264 ORTHO05D007739 3.9e-65 252.7 144 86.1
Psat5g086240 Pisum sativum HOM05D006264 ORTHO05D007739 1.9e-59 233.8 132 86.4
Cpa.g.sc418.8 Carica papaya HOM05D006264 ORTHO05D007739 5.7e-48 195.7 112 77.7
MCO07G330 Micromonas commoda HOM05D006264 ORTHO05D007739 1.3e-47 194.5 315 37.8
Os04g0431200 Oryza sativa ssp. japonica HOM05D006264 ORTHO05D007739 1.7e-47 194.1 135 60.0
PRCOL_00004228 Prasinoderma coloniale HOM05D006264 ORTHO05D007739 1.9e-43 180.6 295 37.3
Cre06.g254450 Chlamydomonas reinhardtii HOM05D006264 ORTHO05D007739 6.1e-42 175.6 303 35.3
arahy.Tifrunner.gnm1.ann1.XAL0CN Arachis hypogaea HOM05D003584 ORTHO05D004148 6.8e-33 145.6 109 59.6
Zm00001eb082740 Zea mays HOM05D006264 ORTHO05D007739 7.5e-32 142.1 133 57.1
SEGI_39749 Sequoiadendron giganteum HOM05D006264 ORTHO05D007739 3.7e-31 139.8 111 68.5
Cpa.g.c45459 Carica papaya HOM05D006264 ORTHO05D007739 8.3e-31 138.7 78 85.9
Medtr4g068980 Medicago truncatula HOM05D006264 ORTHO05D007739 4.5e-29 132.9 78 74.4
SEGI_38549 Sequoiadendron giganteum HOM05D006264 ORTHO05D007739 2.3e-25 120.6 68 69.1
Atru.chr13.1492 Acer truncatum HOM05D006264 ORTHO05D007739 1.3e-20 104.8 64 73.4
Migut.B01582 Erythranthe guttata HOM05D006264 ORTHO05D007739 1.9e-19 100.9 58 77.6
PGSC0003DMG400006698 Solanum tuberosum HOM05D006264 ORTHO05D007739 3.5e-13 80.1 60 60.0
Rhsim11G0069000 Rhododendron simsii HOM05D006264 ORTHO05D007739 1.6e-10 71.2 62 59.7
Actinidia03465 Actinidia chinensis HOM05D006264 ORTHO05D007739 9.8e-08 62.0 36 72.2
SEGI_08627 Sequoiadendron giganteum HOM05D006264 ORTHO05D007739 2.2e-07 60.8 40 60.0
Rhsim11G0068700 Rhododendron simsii HOM05D006264 ORTHO05D007739 3.2e-06 57.0 39 71.8


User provided reference genes

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