Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGR044G1431 Punica granatum HOM05D007067 ORTHO05D008864 2.3e-93 345.5 166 100.0
Eucgr.K02487 Eucalyptus grandis HOM05D007067 ORTHO05D008864 4.3e-60 235.0 170 71.2
Cpa.g.sc111.20 Carica papaya HOM05D007067 ORTHO05D008864 4.4e-57 224.9 168 69.6
CSS0040643 Camellia sinensis var. sinensis HOM05D007067 ORTHO05D008864 1.1e-55 220.3 183 63.9
TWI60G1483 Tripterygium wilfordii HOM05D007067 ORTHO05D008864 9.3e-55 217.2 187 62.0
Manes.06G091000 Manihot esculenta HOM05D007067 ORTHO05D008864 2.1e-54 216.1 186 60.8
Actinidia04879 Actinidia chinensis HOM05D007067 ORTHO05D008864 6.0e-54 214.5 189 61.9
Cc04_g16320 Coffea canephora HOM05D007067 ORTHO05D008864 1.3e-53 213.4 187 61.0
AUR62008437 Chenopodium quinoa HOM05D007067 ORTHO05D008864 3.0e-53 212.2 136 75.7
GSVIVG01004672001 Vitis vinifera HOM05D007067 ORTHO05D008864 3.0e-53 212.2 182 59.9
GSVIVG01005334001 Vitis vinifera HOM05D007067 ORTHO05D008864 3.0e-53 212.2 182 59.9
EL10Ac5g11044 Beta vulgaris HOM05D007067 ORTHO05D008864 3.9e-53 211.8 145 71.7
Nn3g17293 Nelumbo nucifera HOM05D007067 ORTHO05D008864 3.9e-53 211.8 187 58.8
Aqoxy3G00483 Aquilegia oxysepala HOM05D007067 ORTHO05D008864 5.1e-53 211.5 136 73.5
MSTRG.9621 Avicennia marina HOM05D007067 ORTHO05D008864 5.1e-53 211.5 183 59.6
DCAR_016569 Daucus carota HOM05D007067 ORTHO05D008864 5.1e-53 211.5 190 60.0
Sabra12G0047100 Salix brachista HOM05D007067 ORTHO05D008864 5.1e-53 211.5 179 62.6
Cfa018925 Carpinus fangiana HOM05D007067 ORTHO05D008864 8.7e-53 210.7 183 61.2
Nitab4.5_0003381g0030 Nicotiana tabacum HOM05D007067 ORTHO05D008864 8.7e-53 210.7 186 60.8
Duzib205G1209 Durio zibethinus HOM05D007067 ORTHO05D008864 1.1e-52 210.3 191 59.7
Gorai.003G097800 Gossypium raimondii HOM05D007067 ORTHO05D008864 1.1e-52 210.3 160 67.5
Potri.012G068500 Populus trichocarpa HOM05D007067 ORTHO05D008864 1.1e-52 210.3 114 84.2
Gohir.A03G067300 Gossypium hirsutum HOM05D007067 ORTHO05D008864 2.5e-52 209.1 160 67.5
Gohir.D03G093800 Gossypium hirsutum HOM05D007067 ORTHO05D008864 2.5e-52 209.1 160 67.5
Hma1.2p1_0637F.1_g193620 Hydrangea macrophylla HOM05D007067 ORTHO05D008864 3.3e-52 208.8 127 78.0
Eucgr.K02485 Eucalyptus grandis HOM05D007067 ORTHO05D008864 4.3e-52 208.4 156 67.9
Thecc.03G091100 Theobroma cacao HOM05D007067 ORTHO05D008864 7.3e-52 207.6 192 59.9
TAR622G0622 Trochodendron aralioides HOM05D007067 ORTHO05D008864 9.6e-52 207.2 113 82.3
Rhsim08G0153200 Rhododendron simsii HOM05D007067 ORTHO05D008864 1.3e-51 206.8 186 58.6
Nitab4.5_0005226g0040 Nicotiana tabacum HOM05D007067 ORTHO05D008864 1.6e-51 206.5 186 60.2
Atru.chr9.195 Acer truncatum HOM05D007067 ORTHO05D008864 2.1e-51 206.1 177 60.5
QL10p017305 Quercus lobata HOM05D007067 ORTHO05D008864 2.1e-51 206.1 187 61.0
vmacro17532 Vaccinium macrocarpon HOM05D007067 ORTHO05D008864 2.1e-51 206.1 187 58.3
CAN.G846.12 Capsicum annuum HOM05D007067 ORTHO05D008864 2.8e-51 205.7 178 59.0
CDE02G3919 Ceratophyllum demersum HOM05D007067 ORTHO05D008864 3.6e-51 205.3 157 66.9
Prupe.5G195500 Prunus persica HOM05D007067 ORTHO05D008864 3.6e-51 205.3 113 84.1
ClCG06G016120 Citrullus lanatus HOM05D007067 ORTHO05D008864 4.8e-51 204.9 185 56.8
Dinv38731 Davidia involucrata HOM05D007067 ORTHO05D008864 4.8e-51 204.9 172 62.2
MELO3C017182.2 Cucumis melo HOM05D007067 ORTHO05D008864 8.1e-51 204.1 184 56.5
CsaV3_1G002440 Cucumis sativus L. HOM05D007067 ORTHO05D008864 8.1e-51 204.1 184 57.1
RcHm_v2.0_Chr7g0181701 Rosa chinensis HOM05D007067 ORTHO05D008864 8.1e-51 204.1 113 85.0
MD06G1195600 Malus domestica HOM05D007067 ORTHO05D008864 1.8e-50 203.0 113 84.1
MD14G1202700 Malus domestica HOM05D007067 ORTHO05D008864 1.8e-50 203.0 113 84.1
Migut.D01803 Erythranthe guttata HOM05D007067 ORTHO05D008864 2.4e-50 202.6 188 58.0
MBI02_g12272_MAGBIO Magnolia biondii HOM05D007067 ORTHO05D008864 2.4e-50 202.6 127 74.8
FAN08G0270 Fragaria x ananassa HOM05D007067 ORTHO05D008864 4.0e-50 201.8 113 83.2
FAN13G0188 Fragaria x ananassa HOM05D007067 ORTHO05D008864 4.0e-50 201.8 113 83.2
FAN18G1220 Fragaria x ananassa HOM05D007067 ORTHO05D008864 4.0e-50 201.8 113 83.2
Solyc12g036170.2 Solanum lycopersicum HOM05D007067 ORTHO05D008864 4.0e-50 201.8 155 65.2
HanXRQChr05g0156061 Helianthus annuus HOM05D007067 ORTHO05D008864 5.3e-50 201.4 179 60.9
Sopen12g016290 Solanum pennellii HOM05D007067 ORTHO05D008864 6.9e-50 201.1 152 64.5
CANSAT56G4102 Cannabis sativa HOM05D007067 ORTHO05D008864 1.2e-49 200.3 185 57.3
SalBow3G2729 Salvia bowleyana HOM05D007067 ORTHO05D008864 1.2e-49 200.3 175 60.0
PGSC0003DMG400021933 Solanum tuberosum HOM05D007067 ORTHO05D008864 2.6e-49 199.1 127 74.0
CiPaw.11G046200 Carya illinoinensis HOM05D007067 ORTHO05D008864 4.4e-49 198.4 188 59.0
arahy.Tifrunner.gnm1.ann1.V8ZK3N Arachis hypogaea HOM05D007067 ORTHO05D008864 5.8e-49 198.0 177 58.8
Peaxi162Scf00106g00326 Petunia axillaris HOM05D007067 ORTHO05D008864 5.8e-49 198.0 113 80.5
Lsat_1_v5_gn_5_20880 Lactuca sativa HOM05D007067 ORTHO05D008864 7.6e-49 197.6 127 74.0
Sed0012968 Sechium edule HOM05D007067 ORTHO05D008864 1.3e-48 196.8 183 56.8
unitig_0.g778 Utricularia gibba HOM05D007067 ORTHO05D008864 1.3e-48 196.8 110 81.8
arahy.Tifrunner.gnm1.ann1.JMB3VF Arachis hypogaea HOM05D007067 ORTHO05D008864 2.2e-48 196.1 180 58.3
CDE09G1053 Ceratophyllum demersum HOM05D007067 ORTHO05D008864 2.9e-48 195.7 148 66.2
ECA246G0430 Erigeron canadensis HOM05D007067 ORTHO05D008864 2.9e-48 195.7 131 71.0
PSO063G5395 Papaver somniferum HOM05D007067 ORTHO05D008864 4.9e-48 194.9 149 65.1
PSO832G0421 Papaver somniferum HOM05D007067 ORTHO05D008864 4.9e-48 194.9 149 65.1
Peaxi162Scf00106g00037 Petunia axillaris HOM05D007067 ORTHO05D008864 1.1e-47 193.7 111 80.2
Ca_27682_v3 Cicer arietinum L. HOM05D007067 ORTHO05D008864 1.9e-47 193.0 181 56.4
THA.LOC104808257 Tarenaya hassleriana HOM05D007067 ORTHO05D008864 1.9e-47 193.0 135 68.1
Lj5A109T72 Lonicera japonica HOM05D007067 ORTHO05D008864 3.2e-47 192.2 127 72.4
MBI02_g23462_MAGBIO Magnolia biondii HOM05D007067 ORTHO05D008864 4.2e-47 191.8 107 78.5
A06p14840 Brassica napus HOM05D007067 ORTHO05D008864 9.3e-47 190.7 182 56.6
BraA06t24606Z Brassica rapa HOM05D007067 ORTHO05D008864 9.3e-47 190.7 182 56.6
TPR.G11876 Trifolium pratense HOM05D007067 ORTHO05D008864 1.6e-46 189.9 181 55.2
AL1G31200 Arabidopsis lyrata HOM05D007067 ORTHO05D008864 2.7e-46 189.1 182 56.6
BcaC05g25773 Brassica carinata HOM05D007067 ORTHO05D008864 2.7e-46 189.1 160 60.6
C05p17040 Brassica napus HOM05D007067 ORTHO05D008864 4.6e-46 188.3 182 56.0
BolC5t30410H Brassica oleracea HOM05D007067 ORTHO05D008864 4.6e-46 188.3 182 56.0
BcaB07g31890 Brassica carinata HOM05D007067 ORTHO05D008864 1.3e-45 186.8 126 71.4
Thhalv10008902m.g Eutrema salsugineum HOM05D007067 ORTHO05D008864 1.3e-45 186.8 126 71.4
Sp1g16740 Schrenkiella parvula HOM05D007067 ORTHO05D008864 1.3e-45 186.8 126 71.4
AT1G18730 Arabidopsis thaliana HOM05D007067 ORTHO05D008864 1.7e-45 186.4 126 71.4
BcaB03g14481 Brassica carinata HOM05D007067 ORTHO05D008864 1.7e-45 186.4 126 71.4
C08p43060 Brassica napus HOM05D007067 ORTHO05D008864 1.7e-45 186.4 126 71.4
Carub.0001s1838 Capsella rubella HOM05D007067 ORTHO05D008864 1.7e-45 186.4 126 71.4
Phvul.009G186200 Phaseolus vulgaris HOM05D007067 ORTHO05D008864 2.3e-45 186.0 181 55.2
Lalb_Chr08g0235641 Lupinus albus HOM05D007067 ORTHO05D008864 3.0e-45 185.7 160 57.5
CARHR019370 Cardamine hirsuta HOM05D007067 ORTHO05D008864 3.9e-45 185.3 126 70.6
Glyma.04G167400 Glycine max HOM05D007067 ORTHO05D008864 3.9e-45 185.3 138 65.2
Glyma.06G195200 Glycine max HOM05D007067 ORTHO05D008864 5.1e-45 184.9 151 62.3
Lj1g0007284 Lotus japonicus HOM05D007067 ORTHO05D008864 5.1e-45 184.9 187 54.0
A09p59720 Brassica napus HOM05D007067 ORTHO05D008864 8.7e-45 184.1 126 70.6
BraA09t41348Z Brassica rapa HOM05D007067 ORTHO05D008864 8.7e-45 184.1 126 70.6
ATR0564G121 Amborella trichopoda HOM05D007067 ORTHO05D008864 1.1e-44 183.7 119 72.3
Medtr3g435320 Medicago truncatula HOM05D007067 ORTHO05D008864 1.1e-44 183.7 176 56.2
Aa31LG7G3520 Aethionema arabicum HOM05D007067 ORTHO05D008864 3.3e-44 182.2 114 73.7
BolC8t51861H Brassica oleracea HOM05D007067 ORTHO05D008864 2.1e-43 179.5 127 70.1
Psat5g201280 Pisum sativum HOM05D007067 ORTHO05D008864 2.8e-43 179.1 131 65.6
Zm00001eb254450 Zea mays HOM05D007067 ORTHO05D008864 7.6e-41 171.0 138 60.9
Os02g0744000 Oryza sativa ssp. japonica HOM05D007067 ORTHO05D008864 4.9e-40 168.3 140 61.4
COL.COLO4_28333 Corchorus olitorius HOM05D007067 ORTHO05D008864 1.9e-36 156.4 170 54.1
AUR62021654 Chenopodium quinoa HOM05D007067 ORTHO05D008864 1.4e-34 150.2 112 63.4
SEGI_39094 Sequoiadendron giganteum HOM05D007067 ORTHO05D008864 5.1e-29 131.7 129 53.5
BcaC07g41296 Brassica carinata HOM05D007067 ORTHO05D008864 3.3e-28 129.0 89 64.0
Rhsim08G0153500 Rhododendron simsii HOM05D007067 ORTHO05D008864 4.2e-23 112.1 64 82.8
CBR_g30507 Chara braunii HOM05D007067 ORTHO05D008864 1.5e-20 103.6 85 55.3
Mapoly0149s0008 Marchantia polymorpha HOM05D007067 ORTHO05D008864 9.7e-20 100.9 100 44.0
Pp3c16_3930 Physcomitrium patens HOM05D007067 ORTHO05D008864 4.8e-19 98.6 147 38.1
Ciclev10022880m.g Citrus clementina HOM05D007067 ORTHO05D008864 4.1e-18 95.5 87 54.0
FvH4_5g14690 Fragaria vesca HOM05D007067 ORTHO05D008864 2.0e-17 93.2 52 80.8
COL.COLO4_28352 Corchorus olitorius HOM05D004600 ORTHO05D005471 4.1e-10 68.9 52 73.1
Ah.11g048310 Amaranthus hybridus HOM05D007067 ORTHO05D008864 5.0e-08 62.0 90 42.2
Rhsim08G0168600 Rhododendron simsii HOM05D000306 ORTHO05D023263 9.4e-07 57.8 37 81.1


User provided reference genes

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