Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGR044G1277 Punica granatum HOM05D004617 ORTHO05D005531 2.5e-165 585.5 319 100.0
Eucgr.K02817 Eucalyptus grandis HOM05D004617 ORTHO05D005531 3.2e-88 329.3 333 58.6
TAR629G3522 Trochodendron aralioides HOM05D004617 ORTHO05D005531 1.3e-84 317.4 316 58.9
Haze_07552 Corylus avellana HOM05D004617 ORTHO05D005531 1.3e-81 307.4 340 55.0
Dinv38556 Davidia involucrata HOM05D004617 ORTHO05D005531 6.5e-81 305.1 314 54.8
CSS0013084 Camellia sinensis var. sinensis HOM05D004617 ORTHO05D005531 1.4e-80 303.9 314 56.4
TWI39G0523 Tripterygium wilfordii HOM05D004617 ORTHO05D005531 1.2e-79 300.8 323 53.6
CiPaw.12G028900 Carya illinoinensis HOM05D004617 ORTHO05D005531 3.6e-79 299.3 316 54.4
Ciclev10020950m.g Citrus clementina HOM05D004617 ORTHO05D005531 3.6e-79 299.3 340 52.4
GSVIVG01007687001 Vitis vinifera HOM05D004617 ORTHO05D005531 4.6e-79 298.9 315 54.3
Thecc.03G024100 Theobroma cacao HOM05D004617 ORTHO05D005531 7.9e-79 298.1 292 56.8
CSS0042906 Camellia sinensis var. sinensis HOM05D004617 ORTHO05D005531 1.0e-78 297.7 314 55.1
Atru.chr9.2539 Acer truncatum HOM05D004617 ORTHO05D005531 1.4e-78 297.4 346 51.2
Dinv20620 Davidia involucrata HOM05D004617 ORTHO05D005531 5.1e-78 295.4 320 54.4
Cpa.g.sc153.19 Carica papaya HOM05D004617 ORTHO05D005531 1.1e-77 294.3 303 56.4
MD06G1170100 Malus domestica HOM05D004617 ORTHO05D005531 9.7e-77 291.2 312 52.6
QL10p008526 Quercus lobata HOM05D004617 ORTHO05D005531 2.2e-76 290.0 316 52.8
QL10p008663 Quercus lobata HOM05D004617 ORTHO05D005531 2.8e-76 289.7 315 53.3
Nitab4.5_0011992g0040 Nicotiana tabacum HOM05D004617 ORTHO05D005531 1.1e-75 287.7 308 53.2
Sopen03g031610 Solanum pennellii HOM05D004617 ORTHO05D005531 3.1e-75 286.2 314 51.9
Solyc03g112550.3 Solanum lycopersicum HOM05D004617 ORTHO05D005531 4.1e-75 285.8 314 51.9
Cc04_g12560 Coffea canephora HOM05D004617 ORTHO05D005531 2.0e-74 283.5 302 54.3
COL.COLO4_30121 Corchorus olitorius HOM05D004617 ORTHO05D005531 2.0e-74 283.5 280 57.1
MD14G1175700 Malus domestica HOM05D004617 ORTHO05D005531 2.0e-74 283.5 312 52.6
Potri.015G080900 Populus trichocarpa HOM05D004617 ORTHO05D005531 3.4e-74 282.7 314 52.5
Nitab4.5_0001284g0070 Nicotiana tabacum HOM05D004617 ORTHO05D005531 7.7e-74 281.6 308 51.6
Sc04g0001670 Simmondsia chinensis HOM05D004617 ORTHO05D005531 1.0e-73 281.2 313 52.1
Duzib205G1820 Durio zibethinus HOM05D004617 ORTHO05D005531 1.3e-73 280.8 292 54.1
TWI23G0363 Tripterygium wilfordii HOM05D004617 ORTHO05D005531 1.7e-73 280.4 282 55.0
Potri.012G088000 Populus trichocarpa HOM05D004617 ORTHO05D005531 2.9e-73 279.6 314 52.5
RcHm_v2.0_Chr7g0193001 Rosa chinensis HOM05D004617 ORTHO05D005531 2.9e-73 279.6 320 51.9
Manes.06G108000 Manihot esculenta HOM05D004617 ORTHO05D005531 5.0e-73 278.9 305 56.1
Rhsim12G0166500 Rhododendron simsii HOM05D004617 ORTHO05D005531 5.0e-73 278.9 352 48.3
PGSC0003DMG400018106 Solanum tuberosum HOM05D004617 ORTHO05D005531 1.1e-72 277.7 302 51.3
Gohir.A12G272900 Gossypium hirsutum HOM05D004617 ORTHO05D005531 4.2e-72 275.8 292 52.7
Hund09456 Selenicereus undatus HOM05D004617 ORTHO05D005531 9.4e-72 274.6 312 51.0
Gorai.008G294000 Gossypium raimondii HOM05D004617 ORTHO05D005531 1.6e-71 273.9 292 52.4
vmacro16629 Vaccinium macrocarpon HOM05D004617 ORTHO05D005531 1.6e-71 273.9 337 49.6
Sed0022669 Sechium edule HOM05D004617 ORTHO05D005531 2.1e-71 273.5 314 51.6
CANSAT80G0933 Cannabis sativa HOM05D004617 ORTHO05D005531 5.1e-70 268.9 309 52.1
MELO3C026277.2 Cucumis melo HOM05D004617 ORTHO05D005531 5.1e-70 268.9 321 52.3
Gohir.D12G273600 Gossypium hirsutum HOM05D004617 ORTHO05D005531 5.1e-70 268.9 292 51.0
Gohir.A09G172500 Gossypium hirsutum HOM05D004617 ORTHO05D005531 6.7e-70 268.5 290 53.4
CAN.G338.4 Capsicum annuum HOM05D004617 ORTHO05D005531 8.8e-70 268.1 305 49.5
Potri.T124408 Populus trichocarpa HOM05D004617 ORTHO05D005531 8.8e-70 268.1 306 52.9
Nn4g22667 Nelumbo nucifera HOM05D004617 ORTHO05D005531 2.0e-69 266.9 293 52.6
CsaV3_1G001290 Cucumis sativus L. HOM05D004617 ORTHO05D005531 2.6e-69 266.5 321 51.7
FvH4_5g05820 Fragaria vesca HOM05D004617 ORTHO05D005531 9.7e-69 264.6 319 49.8
FAN08G0972 Fragaria x ananassa HOM05D004617 ORTHO05D005531 9.7e-69 264.6 312 51.0
Gorai.006G189800 Gossypium raimondii HOM05D004617 ORTHO05D005531 1.3e-68 264.2 290 53.4
ClCG06G017200 Citrullus lanatus HOM05D004617 ORTHO05D005531 2.4e-67 260.0 315 50.8
Hma1.2p1_0046F.1_g026830 Hydrangea macrophylla HOM05D004617 ORTHO05D005531 4.1e-67 259.2 332 49.1
MSTRG.23154 Avicennia marina HOM05D004617 ORTHO05D005531 5.3e-67 258.8 314 49.4
FAN05G0977 Fragaria x ananassa HOM05D004617 ORTHO05D005531 5.3e-67 258.8 310 49.7
CiPaw.11G022700 Carya illinoinensis HOM05D004617 ORTHO05D005531 7.0e-67 258.5 309 52.4
FvH4_6g24101 Fragaria vesca HOM05D004617 ORTHO05D005531 3.5e-66 256.1 309 49.8
Sc12g0005180 Simmondsia chinensis HOM05D004617 ORTHO05D005531 5.0e-65 252.3 341 46.0
arahy.Tifrunner.gnm1.ann1.P4R84V Arachis hypogaea HOM05D004617 ORTHO05D005531 8.5e-65 251.5 299 47.2
Sabra12G0062800 Salix brachista HOM05D004617 ORTHO05D005531 2.5e-64 250.0 347 46.4
HanXRQChr05g0154591 Helianthus annuus HOM05D004617 ORTHO05D005531 3.2e-64 249.6 318 47.2
PSO478G3702 Papaver somniferum HOM05D004617 ORTHO05D005531 5.5e-64 248.8 302 49.3
arahy.Tifrunner.gnm1.ann1.B97T9I Arachis hypogaea HOM05D004617 ORTHO05D005531 2.1e-63 246.9 299 46.5
Migut.O00131 Erythranthe guttata HOM05D004617 ORTHO05D005531 2.7e-63 246.5 314 50.0
ECA246G2887 Erigeron canadensis HOM05D004617 ORTHO05D005531 6.1e-63 245.4 315 48.3
Oeu001681.1 Olea europaea HOM05D004617 ORTHO05D005531 6.1e-63 245.4 318 49.4
Lalb_Chr23g0273321 Lupinus albus HOM05D004617 ORTHO05D005531 8.0e-63 245.0 294 49.3
Glyma.05G040000 Glycine max HOM05D004617 ORTHO05D005531 1.0e-62 244.6 301 49.2
Aqoxy3G01097 Aquilegia oxysepala HOM05D004617 ORTHO05D005531 2.3e-62 243.4 307 48.2
DCAR_021575 Daucus carota HOM05D004617 ORTHO05D005531 2.3e-62 243.4 309 46.6
FAN13G0632 Fragaria x ananassa HOM05D004617 ORTHO05D005531 4.0e-62 242.7 262 51.5
Lsat_1_v5_gn_5_15901 Lactuca sativa HOM05D004617 ORTHO05D005531 4.0e-62 242.7 307 48.9
Sopen06g027890 Solanum pennellii HOM05D004617 ORTHO05D005531 6.7e-62 241.9 310 47.4
Peaxi162Scf00089g01634 Petunia axillaris HOM05D004617 ORTHO05D005531 8.8e-62 241.5 308 47.1
Sabra15G0104900 Salix brachista HOM05D004617 ORTHO05D005531 1.1e-61 241.1 302 48.0
Lj4g0013782 Lotus japonicus HOM05D004617 ORTHO05D005531 5.7e-61 238.8 302 46.4
EL10Ac5g10692 Beta vulgaris HOM05D004617 ORTHO05D005531 9.7e-61 238.0 234 54.3
PGSC0003DMG400027080 Solanum tuberosum HOM05D004617 ORTHO05D005531 2.2e-60 236.9 306 47.4
MSTRG.11480 Avicennia marina HOM05D004617 ORTHO05D005531 2.8e-60 236.5 309 48.5
Prupe.5G169600 Prunus persica HOM05D004617 ORTHO05D005531 2.8e-60 236.5 319 48.0
Solyc06g071600.3 Solanum lycopersicum HOM05D004617 ORTHO05D005531 2.8e-60 236.5 310 46.1
Lj9A445T80 Lonicera japonica HOM05D004617 ORTHO05D005531 3.7e-60 236.1 366 43.2
VMungo1215G2409 Vigna mungo HOM05D004617 ORTHO05D005531 1.1e-59 234.6 301 46.8
Phvul.003G203200 Phaseolus vulgaris HOM05D004617 ORTHO05D005531 1.4e-59 234.2 301 47.5
FAN18G1615 Fragaria x ananassa HOM05D004617 ORTHO05D005531 2.4e-59 233.4 235 53.6
PSO017G2275 Papaver somniferum HOM05D004617 ORTHO05D005531 7.0e-59 231.9 302 48.0
AUR62029851 Chenopodium quinoa HOM05D004617 ORTHO05D005531 1.6e-58 230.7 296 44.6
THA.LOC104818211 Tarenaya hassleriana HOM05D004617 ORTHO05D005531 1.0e-57 228.0 314 45.2
Phvul.009G175700 Phaseolus vulgaris HOM05D004617 ORTHO05D005531 6.5e-57 225.3 295 44.7
AUR62008173 Chenopodium quinoa HOM05D004617 ORTHO05D005531 8.5e-57 224.9 257 47.9
MBI16_g23858_MAGBIO Magnolia biondii HOM05D004617 ORTHO05D005531 1.5e-56 224.2 323 46.4
CARHR156970 Cardamine hirsuta HOM05D004617 ORTHO05D005531 2.5e-56 223.4 317 45.1
Lj5A127T55 Lonicera japonica HOM05D004617 ORTHO05D005531 9.4e-56 221.5 260 51.2
Aa31LG4G16830 Aethionema arabicum HOM05D004617 ORTHO05D005531 3.6e-55 219.5 310 45.8
Carub.0005s1437 Capsella rubella HOM05D004617 ORTHO05D005531 1.4e-54 217.6 306 44.4
Thhalv10010559m.g Eutrema salsugineum HOM05D004617 ORTHO05D005531 1.4e-54 217.6 305 43.6
TPR.G37539 Trifolium pratense HOM05D004617 ORTHO05D005531 1.4e-54 217.6 295 46.4
AL5G27600 Arabidopsis lyrata HOM05D004617 ORTHO05D005531 3.0e-54 216.5 308 42.9
Sp5g13810 Schrenkiella parvula HOM05D004617 ORTHO05D005531 3.0e-54 216.5 302 44.4
Actinidia19118 Actinidia chinensis HOM05D004617 ORTHO05D005531 6.8e-54 215.3 236 55.5
AUR62028750 Chenopodium quinoa HOM05D004617 ORTHO05D005531 1.2e-53 214.5 288 43.8
THA.LOC104798968 Tarenaya hassleriana HOM05D004617 ORTHO05D005531 1.2e-53 214.5 276 45.7
C03p66610 Brassica napus HOM05D004617 ORTHO05D005531 1.5e-53 214.2 308 41.9
Ca_21946_v3 Cicer arietinum L. HOM05D004617 ORTHO05D005531 1.5e-53 214.2 324 42.3
BcaC01g02324 Brassica carinata HOM05D004617 ORTHO05D005531 2.0e-53 213.8 308 41.9
BolC3t18931H Brassica oleracea HOM05D004617 ORTHO05D005531 2.0e-53 213.8 308 41.9
CAN.G993.37 Capsicum annuum HOM05D004617 ORTHO05D005531 2.6e-53 213.4 312 42.6
Thhalv10010553m.g Eutrema salsugineum HOM05D004617 ORTHO05D005531 2.6e-53 213.4 305 43.6
AT3G48210 Arabidopsis thaliana HOM05D004617 ORTHO05D005531 7.5e-53 211.8 309 42.4
Gohir.D09G168200 Gossypium hirsutum HOM05D004617 ORTHO05D005531 2.2e-52 210.3 290 47.9
Nitab4.5_0003918g0030 Nicotiana tabacum HOM05D004617 ORTHO05D005531 4.8e-52 209.1 306 43.1
SGA_v2.0_scaffold90G27877 Striga asiatica HOM05D004617 ORTHO05D005531 1.8e-51 207.2 309 42.7
Ca_29672_v3 Cicer arietinum L. HOM05D004617 ORTHO05D005531 5.4e-51 205.7 289 43.6
VMungo1309G0654 Vigna mungo HOM05D004617 ORTHO05D005531 1.6e-50 204.1 318 41.2
BraA06t25690Z Brassica rapa HOM05D004617 ORTHO05D005531 2.7e-50 203.4 311 41.5
BcaB02g10666 Brassica carinata HOM05D004617 ORTHO05D005531 3.5e-50 203.0 308 40.9
A06p27500 Brassica napus HOM05D004617 ORTHO05D005531 3.5e-50 203.0 311 41.2
Medtr4g105330 Medicago truncatula HOM05D004617 ORTHO05D005531 3.8e-49 199.5 293 43.0
TAR371G0263 Trochodendron aralioides HOM05D004617 ORTHO05D005531 1.9e-48 197.2 190 56.3
Psat4g059160 Pisum sativum HOM05D004617 ORTHO05D005531 9.4e-48 194.9 292 42.5
SalBow5G0770 Salvia bowleyana HOM05D004617 ORTHO05D005531 5.2e-46 189.1 244 48.8
SalBow5G2990 Salvia bowleyana HOM05D004617 ORTHO05D005531 8.8e-46 188.3 239 48.5
DCAR_004467 Daucus carota HOM05D004617 ORTHO05D005531 1.8e-43 180.6 223 45.7
HPP92_011588 Vanilla planifolia HOM05D004617 ORTHO05D005531 1.7e-41 174.1 309 38.8
ATR1152G034 Amborella trichopoda HOM05D004617 ORTHO05D005531 6.6e-41 172.2 223 42.6
Cpa.g.sc153.20 Carica papaya HOM05D004617 ORTHO05D005531 1.1e-40 171.4 193 52.3
unitig_0.g2533 Utricularia gibba HOM05D004617 ORTHO05D005531 2.1e-39 167.2 246 43.1
CDE05G2613 Ceratophyllum demersum HOM05D004617 ORTHO05D005531 1.3e-36 157.9 231 39.8
Os05g0110700 Oryza sativa ssp. japonica HOM05D004617 ORTHO05D005531 3.7e-36 156.4 300 37.3
Os01g0973200 Oryza sativa ssp. japonica HOM05D004617 ORTHO05D005531 4.1e-35 152.9 305 34.8
Psat4g095560 Pisum sativum HOM05D004617 ORTHO05D005531 3.5e-34 149.8 323 36.2
SEGI_25965 Sequoiadendron giganteum HOM05D004617 ORTHO05D005531 3.9e-33 146.4 213 39.0
Zm00001eb139780 Zea mays HOM05D004617 ORTHO05D005531 3.3e-32 143.3 224 37.5
FAN02G3554 Fragaria x ananassa HOM05D004617 ORTHO05D005531 1.6e-31 141.0 137 51.1
CDE02G4133 Ceratophyllum demersum HOM05D004617 ORTHO05D005531 6.2e-31 139.0 221 40.3
Zm00001eb362200 Zea mays HOM05D004617 ORTHO05D005531 1.7e-28 131.0 224 35.3
Glyma.04G186200 Glycine max HOM05D004617 ORTHO05D005531 8.3e-28 128.6 152 42.1
A06p19470 Brassica napus HOM05D004617 ORTHO05D005531 7.8e-26 122.1 251 36.3
BraA06t25026Z Brassica rapa HOM05D004617 ORTHO05D005531 8.6e-25 118.6 238 36.6
arahy.Tifrunner.gnm1.ann1.H09BLY Arachis hypogaea HOM05D004617 ORTHO05D005531 2.5e-24 117.1 147 45.6
Aqoxy5G01948 Aquilegia oxysepala HOM05D004617 ORTHO05D005531 2.1e-23 114.0 188 42.6
Glyma.06G179933 Glycine max HOM05D004617 ORTHO05D005531 2.3e-22 110.5 149 39.6
BcaC07g39309 Brassica carinata HOM05D004617 ORTHO05D005531 4.4e-21 106.3 180 39.4
C08p23230 Brassica napus HOM05D004617 ORTHO05D005531 1.9e-19 100.9 194 36.6
Atru.chr9.2524 Acer truncatum HOM05D004617 ORTHO05D005531 5.1e-17 92.8 98 56.1
Zm00001eb355840 Zea mays HOM05D004617 ORTHO05D005531 4.3e-16 89.7 213 30.5
Pp3c3_37370 Physcomitrium patens HOM05D004617 ORTHO05D005531 3.1e-14 83.6 220 29.5
vmacro20892 Vaccinium macrocarpon HOM05D000448 ORTHO05D000291 7.6e-13 79.0 67 59.7
Pp3c8_1270 Physcomitrium patens HOM05D004617 ORTHO05D005531 1.7e-12 77.8 169 30.2
SMO200G0114 Selaginella moellendorffii HOM05D004617 ORTHO05D005531 2.2e-12 77.4 99 41.4
Mapoly0029s0121 Marchantia polymorpha HOM05D004617 ORTHO05D005531 4.1e-11 73.2 223 28.3
arahy.Tifrunner.gnm1.ann1.8UC028 Arachis hypogaea HOM05D004617 ORTHO05D005531 1.2e-07 61.6 100 39.0
Glyma.17G086900 Glycine max HOM05D004617 ORTHO05D005531 2.8e-07 60.5 78 44.9
PRCOL_00005442 Prasinoderma coloniale HOM05D004617 ORTHO05D005531 3.1e-06 57.0 222 25.7


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