Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGR044G1209 Punica granatum HOM05D006768 ORTHO05D008436 5.7e-47 190.7 102 100.0
Nitab4.5_0010364g0020 Nicotiana tabacum HOM05D006768 ORTHO05D008436 1.2e-41 172.9 102 85.3
Hma1.2p1_0009F.1_g006320 Hydrangea macrophylla HOM05D006768 ORTHO05D008436 2.1e-41 172.2 104 87.5
Potri.005G174700 Populus trichocarpa HOM05D006768 ORTHO05D008436 3.6e-41 171.4 102 86.3
Sed0001868 Sechium edule HOM05D006768 ORTHO05D008436 3.6e-41 171.4 102 80.4
MELO3C011580.2 Cucumis melo HOM05D006768 ORTHO05D008436 6.1e-41 170.6 102 80.4
ClCG08G005390 Citrullus lanatus HOM05D006768 ORTHO05D008436 8.0e-41 170.2 102 80.4
Manes.02G160800 Manihot esculenta HOM05D006768 ORTHO05D008436 1.4e-40 169.5 102 82.4
Solyc11g013100.2 Solanum lycopersicum HOM05D006768 ORTHO05D008436 1.4e-40 169.5 102 81.4
Sopen11g008160 Solanum pennellii HOM05D006768 ORTHO05D008436 1.4e-40 169.5 102 81.4
Manes.18G074850 Manihot esculenta HOM05D006768 ORTHO05D008436 2.3e-40 168.7 102 81.4
Dinv27347 Davidia involucrata HOM05D006768 ORTHO05D008436 1.2e-39 166.4 94 93.6
Potri.002G086600 Populus trichocarpa HOM05D006768 ORTHO05D008436 1.2e-39 166.4 102 83.3
GSVIVG01008909001 Vitis vinifera HOM05D006768 ORTHO05D008436 1.5e-39 166.0 110 84.5
Duzib116G0009 Durio zibethinus HOM05D006768 ORTHO05D008436 5.7e-39 164.1 102 81.4
COL.COLO4_38328 Corchorus olitorius HOM05D006768 ORTHO05D008436 1.3e-38 162.9 104 82.7
MSTRG.25394 Avicennia marina HOM05D006768 ORTHO05D008436 1.7e-38 162.5 102 84.3
Thecc.08G120600 Theobroma cacao HOM05D006768 ORTHO05D008436 1.7e-38 162.5 103 82.5
Gohir.D02G081200 Gossypium hirsutum HOM05D006768 ORTHO05D008436 3.7e-38 161.4 103 79.6
CSS0001196 Camellia sinensis var. sinensis HOM05D006768 ORTHO05D008436 4.8e-38 161.0 111 76.6
CSS0006116 Camellia sinensis var. sinensis HOM05D006768 ORTHO05D008436 8.2e-38 160.2 102 80.4
Gohir.A05G233000 Gossypium hirsutum HOM05D006768 ORTHO05D008436 8.2e-38 160.2 103 81.6
Nitab4.5_0005357g0030 Nicotiana tabacum HOM05D006768 ORTHO05D008436 1.1e-37 159.8 96 83.3
Duzib041G0323 Durio zibethinus HOM05D006768 ORTHO05D008436 1.4e-37 159.5 103 81.6
Hma1.2p1_0073F.1_g038410 Hydrangea macrophylla HOM05D006768 ORTHO05D008436 1.4e-37 159.5 101 86.1
Cpa.g.sc36.24 Carica papaya HOM05D006768 ORTHO05D008436 1.8e-37 159.1 104 79.8
CsaV3_6G003570 Cucumis sativus L. HOM05D006768 ORTHO05D008436 3.1e-37 158.3 96 79.2
CAN.G342.8 Capsicum annuum HOM05D006768 ORTHO05D008436 9.1e-37 156.8 102 78.4
Aqoxy6G00156 Aquilegia oxysepala HOM05D006768 ORTHO05D008436 1.2e-36 156.4 101 77.2
FvH4_2g26460 Fragaria vesca HOM05D006768 ORTHO05D008436 1.2e-36 156.4 102 84.3
FAN24G3387 Fragaria x ananassa HOM05D006768 ORTHO05D008436 1.2e-36 156.4 102 85.3
Gohir.D05G235400 Gossypium hirsutum HOM05D006768 ORTHO05D008436 1.2e-36 156.4 103 76.7
RcHm_v2.0_Chr6g0295131 Rosa chinensis HOM05D006768 ORTHO05D008436 1.2e-36 156.4 102 84.3
Prupe.1G502600 Prunus persica HOM05D006768 ORTHO05D008436 2.7e-36 155.2 102 85.3
PGSC0003DMG400014092 Solanum tuberosum HOM05D006768 ORTHO05D008436 4.5e-36 154.5 102 77.5
Gohir.A02G074000 Gossypium hirsutum HOM05D006768 ORTHO05D008436 5.9e-36 154.1 103 80.6
TWI56G0584 Tripterygium wilfordii HOM05D006768 ORTHO05D008436 1.0e-35 153.3 105 81.9
CAN.G2.37 Capsicum annuum HOM05D006768 ORTHO05D008436 1.7e-35 152.5 102 76.5
TAR625G0411 Trochodendron aralioides HOM05D006768 ORTHO05D008436 2.9e-35 151.8 101 78.2
Gorai.005G090800 Gossypium raimondii HOM05D006768 ORTHO05D008436 5.0e-35 151.0 104 76.0
SalBow7G0914 Salvia bowleyana HOM05D006768 ORTHO05D008436 5.0e-35 151.0 95 76.8
SalBow7G4665 Salvia bowleyana HOM05D006768 ORTHO05D008436 5.0e-35 151.0 95 76.8
Migut.C01157 Erythranthe guttata HOM05D006768 ORTHO05D008436 6.5e-35 150.6 111 71.2
RhsimUnG0095400 Rhododendron simsii HOM05D006768 ORTHO05D008436 8.5e-35 150.2 95 85.3
Sabra02G0068000 Salix brachista HOM05D006768 ORTHO05D008436 8.5e-35 150.2 96 81.2
Ciclev10002911m.g Citrus clementina HOM05D006768 ORTHO05D008436 1.1e-34 149.8 108 73.1
Lsat_1_v5_gn_4_25061 Lactuca sativa HOM05D006768 ORTHO05D008436 4.2e-34 147.9 108 72.2
EL10Ac1g00013 Beta vulgaris HOM05D006768 ORTHO05D008436 5.5e-34 147.5 107 71.0
Cc10_g11060 Coffea canephora HOM05D006768 ORTHO05D008436 5.5e-34 147.5 96 76.0
FAN15G1404 Fragaria x ananassa HOM05D006768 ORTHO05D008436 1.2e-33 146.4 97 83.5
HanXRQChr08g0223691 Helianthus annuus HOM05D006768 ORTHO05D008436 1.2e-33 146.4 102 77.5
TAR376G1039 Trochodendron aralioides HOM05D000018 ORTHO05D001920 3.6e-33 144.8 91 80.2
CiPaw.06G026900 Carya illinoinensis HOM05D006768 ORTHO05D008436 6.1e-33 144.1 108 70.4
vmacro00812 Vaccinium macrocarpon HOM05D006768 ORTHO05D008436 6.1e-33 144.1 103 72.8
HanXRQChr16g0527071 Helianthus annuus HOM05D006768 ORTHO05D008436 1.4e-32 142.9 101 80.2
arahy.Tifrunner.gnm1.ann1.BFT67J Arachis hypogaea HOM05D006768 ORTHO05D008436 5.2e-32 141.0 113 65.5
arahy.Tifrunner.gnm1.ann1.V4QE5E Arachis hypogaea HOM05D006768 ORTHO05D008436 5.2e-32 141.0 113 65.5
ECA234G1078 Erigeron canadensis HOM05D006768 ORTHO05D008436 8.8e-32 140.2 112 67.0
Gorai.009G243700 Gossypium raimondii HOM05D006768 ORTHO05D008436 8.8e-32 140.2 98 72.4
CANSAT25G0473 Cannabis sativa HOM05D006768 ORTHO05D008436 2.6e-31 138.7 112 67.9
PSO170G4432 Papaver somniferum HOM05D006768 ORTHO05D008436 2.6e-31 138.7 103 79.6
PSO528G0064 Papaver somniferum HOM05D006768 ORTHO05D008436 2.6e-31 138.7 103 79.6
TWI12G0503 Tripterygium wilfordii HOM05D006768 ORTHO05D008436 5.7e-31 137.5 106 77.4
ECA233G5727 Erigeron canadensis HOM05D006768 ORTHO05D008436 7.5e-31 137.1 101 74.3
unitig_21.g20584 Utricularia gibba HOM05D006768 ORTHO05D008436 7.5e-31 137.1 101 65.3
AUR62004718 Chenopodium quinoa HOM05D006768 ORTHO05D008436 1.3e-30 136.3 113 64.6
Psat2g079320 Pisum sativum HOM05D006768 ORTHO05D008436 2.8e-30 135.2 117 65.8
Sabra05G0131800 Salix brachista HOM05D006768 ORTHO05D008436 2.8e-30 135.2 85 81.2
Atru.chr13.1393 Acer truncatum HOM05D006768 ORTHO05D008436 6.3e-30 134.0 107 70.1
MBI06_g02573_MAGBIO Magnolia biondii HOM05D006768 ORTHO05D008436 6.3e-30 134.0 94 78.7
Glyma.13G082200 Glycine max HOM05D006768 ORTHO05D008436 8.3e-30 133.7 111 67.6
Glyma.14G163200 Glycine max HOM05D006768 ORTHO05D008436 1.4e-29 132.9 111 67.6
Phvul.008G165800 Phaseolus vulgaris HOM05D006768 ORTHO05D008436 1.4e-29 132.9 114 64.9
MD08G1168400 Malus domestica HOM05D006768 ORTHO05D008436 1.8e-29 132.5 107 69.2
Thhalv10029535m.g Eutrema salsugineum HOM05D006768 ORTHO05D008436 2.4e-29 132.1 110 63.6
BcaB01g02871 Brassica carinata HOM05D006768 ORTHO05D008436 4.1e-29 131.3 110 64.5
Lalb_Chr04g0253331 Lupinus albus HOM05D006768 ORTHO05D008436 1.2e-28 129.8 118 61.0
CARHR259330 Cardamine hirsuta HOM05D006768 ORTHO05D008436 2.0e-28 129.0 111 62.2
Sp6g09840 Schrenkiella parvula HOM05D006768 ORTHO05D008436 2.0e-28 129.0 120 60.0
BcaC01g04777 Brassica carinata HOM05D006768 ORTHO05D008436 2.7e-28 128.6 118 60.2
BolC3t15699H Brassica oleracea HOM05D006768 ORTHO05D008436 2.7e-28 128.6 118 60.2
Eucgr.F04346 Eucalyptus grandis HOM05D006768 ORTHO05D008436 2.7e-28 128.6 86 79.1
BraA03t12013Z Brassica rapa HOM05D006768 ORTHO05D008436 3.5e-28 128.3 119 59.7
TPR.G8510 Trifolium pratense HOM05D006768 ORTHO05D008436 5.9e-28 127.5 114 61.4
Haze_00489 Corylus avellana HOM05D006768 ORTHO05D008436 1.0e-27 126.7 84 76.2
QL09p036660 Quercus lobata HOM05D006768 ORTHO05D008436 1.3e-27 126.3 118 60.2
Hund27041 Selenicereus undatus HOM05D006768 ORTHO05D008436 1.7e-27 125.9 109 61.5
THA.LOC104817125 Tarenaya hassleriana HOM05D006768 ORTHO05D008436 2.9e-27 125.2 114 61.4
SGA_v2.0_scaffold24G10479 Striga asiatica HOM05D006768 ORTHO05D008436 1.9e-26 122.5 101 59.4
Sc23g0000800 Simmondsia chinensis HOM05D006768 ORTHO05D008436 4.2e-26 121.3 89 73.0
FAN20G0213 Fragaria x ananassa HOM05D000048 ORTHO05D004674 7.2e-26 120.6 89 77.5
Medtr5g059100 Medicago truncatula HOM05D006768 ORTHO05D008436 7.2e-26 120.6 111 62.2
A03p28000 Brassica napus HOM05D006768 ORTHO05D008436 1.6e-25 119.4 112 58.9
C03p33820 Brassica napus HOM05D006768 ORTHO05D008436 1.6e-25 119.4 112 58.9
VMungo0647G1658 Vigna mungo HOM05D006768 ORTHO05D008436 2.8e-25 118.6 107 61.7
Lj1g0025240 Lotus japonicus HOM05D006768 ORTHO05D008436 4.7e-25 117.9 121 57.0
HPP92_011177 Vanilla planifolia HOM05D006768 ORTHO05D008436 1.4e-24 116.3 101 63.4
CSS0018251 Camellia sinensis var. sinensis HOM05D006768 ORTHO05D008436 2.3e-24 115.5 66 86.4
AT4G08230 Arabidopsis thaliana HOM05D006768 ORTHO05D008436 4.0e-24 114.8 115 58.3
AL6G41870 Arabidopsis lyrata HOM05D006768 ORTHO05D008436 6.8e-24 114.0 117 56.4
Carub.0006s2676 Capsella rubella HOM05D006768 ORTHO05D008436 6.8e-24 114.0 119 55.5
THA.LOC104806813 Tarenaya hassleriana HOM05D006768 ORTHO05D008436 1.2e-23 113.2 109 61.5
Zm00001eb398080 Zea mays HOM05D006768 ORTHO05D008436 1.2e-23 113.2 122 51.6
CDE04G1345 Ceratophyllum demersum HOM05D006768 ORTHO05D008436 1.5e-23 112.8 111 54.1
Os03g0263700 Oryza sativa ssp. japonica HOM05D006768 ORTHO05D008436 2.6e-23 112.1 108 64.8
CDE08G1444 Ceratophyllum demersum HOM05D006768 ORTHO05D008436 7.5e-23 110.5 115 55.7
Zm00001eb011610 Zea mays HOM05D006768 ORTHO05D008436 6.3e-22 107.5 121 51.2
Peaxi162Scf00000g61010 Petunia axillaris HOM05D006768 ORTHO05D008436 2.4e-21 105.5 64 84.4
FAN27G1871 Fragaria x ananassa HOM05D000048 ORTHO05D004674 3.1e-21 105.1 78 79.5
SEGI_37020 Sequoiadendron giganteum HOM05D006768 ORTHO05D008436 1.8e-16 89.4 103 50.5
Aa31LG9G14330 Aethionema arabicum HOM05D006768 ORTHO05D008436 2.6e-15 85.5 58 70.7
Nitab4.5_0001142g0120 Nicotiana tabacum HOM05D006768 ORTHO05D008436 7.5e-15 84.0 94 50.0
AUR62023633 Chenopodium quinoa HOM05D006768 ORTHO05D008436 1.1e-13 80.1 75 61.3
Ca_28007_v3 Cicer arietinum L. HOM05D006768 ORTHO05D008436 1.8e-13 79.3 87 55.2
Sabra05G0131600 Salix brachista HOM05D006768 ORTHO05D008436 3.2e-13 78.6 56 76.8
Nn1g08704 Nelumbo nucifera HOM05D006768 ORTHO05D008436 4.1e-13 78.2 50 88.0
Mapoly0043s0020 Marchantia polymorpha HOM05D006768 ORTHO05D008436 7.8e-12 73.9 115 47.0
AagrBONN_evm.TU.Sc2ySwM_344.1603 Anthoceros agrestis HOM05D006768 ORTHO05D008436 1.5e-10 69.7 104 45.2
Pp3c13_12030 Physcomitrium patens HOM05D006768 ORTHO05D008436 3.6e-09 65.1 101 43.6
DCAR_014111 Daucus carota HOM05D006768 ORTHO05D008436 4.9e-06 54.7 55 65.5
SMO308G0024 Selaginella moellendorffii HOM05D006768 ORTHO05D008436 4.9e-06 54.7 103 42.7


User provided reference genes

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