Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGR044G1116 Punica granatum HOM05D007112 ORTHO05D008930 1.8e-136 489.2 235 100.0
Eucgr.K02360 Eucalyptus grandis HOM05D007112 ORTHO05D008930 1.2e-68 263.8 223 59.2
TWI36G0064 Tripterygium wilfordii HOM05D007112 ORTHO05D008930 5.5e-61 238.4 233 51.1
Migut.D00774 Erythranthe guttata HOM05D007112 ORTHO05D008930 5.1e-59 231.9 226 50.4
Cfa017735 Carpinus fangiana HOM05D007112 ORTHO05D008930 8.8e-59 231.1 221 51.1
MD05G1153700 Malus domestica HOM05D007112 ORTHO05D008930 2.0e-58 229.9 229 52.4
Duzib133G1446 Durio zibethinus HOM05D007112 ORTHO05D008930 2.5e-58 229.6 233 50.2
FvH4_2g17490 Fragaria vesca HOM05D007112 ORTHO05D008930 4.3e-58 228.8 226 53.5
Prupe.8G187100 Prunus persica HOM05D007112 ORTHO05D008930 7.4e-58 228.0 235 51.5
TAR362G0557 Trochodendron aralioides HOM05D007112 ORTHO05D008930 7.4e-58 228.0 229 49.3
RcHm_v2.0_Chr6g0282211 Rosa chinensis HOM05D007112 ORTHO05D008930 1.3e-57 227.3 226 52.7
COL.COLO4_34270 Corchorus olitorius HOM05D007112 ORTHO05D008930 2.8e-57 226.1 227 49.8
CANSAT01G1474 Cannabis sativa HOM05D007112 ORTHO05D008930 3.7e-57 225.7 244 51.6
Gohir.A07G195600 Gossypium hirsutum HOM05D007112 ORTHO05D008930 4.8e-57 225.3 234 50.0
Hma1.2p1_1043F.1_g251280 Hydrangea macrophylla HOM05D007112 ORTHO05D008930 6.3e-57 224.9 231 49.8
FAN15G3611 Fragaria x ananassa HOM05D007112 ORTHO05D008930 8.2e-57 224.6 226 51.8
Rhsim01G0247600 Rhododendron simsii HOM05D007112 ORTHO05D008930 8.2e-57 224.6 229 52.0
Atru.chr6.3529 Acer truncatum HOM05D007112 ORTHO05D008930 1.1e-56 224.2 235 47.7
Gorai.001G227200 Gossypium raimondii HOM05D007112 ORTHO05D008930 1.8e-56 223.4 231 49.4
GSVIVG01001529001 Vitis vinifera HOM05D007112 ORTHO05D008930 1.8e-56 223.4 234 48.3
Sabra14G0134200 Salix brachista HOM05D007112 ORTHO05D008930 2.4e-56 223.0 231 48.9
ClCG09G008370 Citrullus lanatus HOM05D007112 ORTHO05D008930 4.1e-56 222.2 235 47.7
Gohir.D07G202200 Gossypium hirsutum HOM05D007112 ORTHO05D008930 5.3e-56 221.9 231 49.8
CsaV3_7G026720 Cucumis sativus L. HOM05D007112 ORTHO05D008930 9.1e-56 221.1 230 49.6
arahy.Tifrunner.gnm1.ann1.T2R7SH Arachis hypogaea HOM05D007112 ORTHO05D008930 1.7e-54 216.9 223 48.4
Ciclev10016325m.g Citrus clementina HOM05D007112 ORTHO05D008930 1.7e-54 216.9 236 47.0
Dinv28792 Davidia involucrata HOM05D007112 ORTHO05D008930 2.2e-54 216.5 229 48.9
Oeu013523.1 Olea europaea HOM05D007112 ORTHO05D008930 2.9e-54 216.1 230 48.7
Peaxi162Scf02239g00022 Petunia axillaris HOM05D007112 ORTHO05D008930 5.0e-54 215.3 236 44.9
vmacro14688 Vaccinium macrocarpon HOM05D007112 ORTHO05D008930 5.0e-54 215.3 208 51.4
SalBow3G4154 Salvia bowleyana HOM05D007112 ORTHO05D008930 6.5e-54 214.9 230 50.0
Thecc.01G207600 Theobroma cacao HOM05D007112 ORTHO05D008930 1.1e-53 214.2 239 47.3
LjContig00389g0002281 Lotus japonicus HOM05D007112 ORTHO05D008930 1.4e-53 213.8 222 50.0
VMungo0331G1777 Vigna mungo HOM05D007112 ORTHO05D008930 1.4e-53 213.8 222 48.6
Sed0011312 Sechium edule HOM05D007112 ORTHO05D008930 4.2e-53 212.2 226 49.6
AUR62008068 Chenopodium quinoa HOM05D007112 ORTHO05D008930 5.5e-53 211.8 228 50.4
Medtr8g010140 Medicago truncatula HOM05D007112 ORTHO05D008930 7.2e-53 211.5 224 49.6
Nitab4.5_0010469g0020 Nicotiana tabacum HOM05D007112 ORTHO05D008930 7.2e-53 211.5 232 44.8
AUR62028645 Chenopodium quinoa HOM05D007112 ORTHO05D008930 9.4e-53 211.1 228 50.9
Actinidia23803 Actinidia chinensis HOM05D007112 ORTHO05D008930 2.7e-52 209.5 229 49.8
Psat4g208280 Pisum sativum HOM05D007112 ORTHO05D008930 2.7e-52 209.5 232 46.1
Nitab4.5_0000038g0350 Nicotiana tabacum HOM05D007112 ORTHO05D008930 4.7e-52 208.8 232 45.3
QL05p089159 Quercus lobata HOM05D007112 ORTHO05D008930 6.1e-52 208.4 222 49.1
Hund02806 Selenicereus undatus HOM05D007112 ORTHO05D008930 1.4e-51 207.2 228 48.2
Aqoxy5G04050 Aquilegia oxysepala HOM05D007112 ORTHO05D008930 1.8e-51 206.8 224 48.2
Lj2A1111T23 Lonicera japonica HOM05D007112 ORTHO05D008930 2.3e-51 206.5 232 47.0
TPR.G17379 Trifolium pratense HOM05D007112 ORTHO05D008930 2.3e-51 206.5 222 49.1
PSO675G4719 Papaver somniferum HOM05D007112 ORTHO05D008930 6.7e-51 204.9 250 46.8
Cc01_g15870 Coffea canephora HOM05D007112 ORTHO05D008930 8.8e-51 204.5 233 45.5
CSS0005940 Camellia sinensis var. sinensis HOM05D007112 ORTHO05D008930 1.1e-50 204.1 235 46.4
FAN24G0137 Fragaria x ananassa HOM05D007112 ORTHO05D008930 1.1e-50 204.1 231 49.8
THA.LOC104819012 Tarenaya hassleriana HOM05D007112 ORTHO05D008930 1.1e-50 204.1 233 47.6
Manes.13G056200 Manihot esculenta HOM05D007112 ORTHO05D008930 1.5e-50 203.8 172 58.1
PGSC0003DMG400021909 Solanum tuberosum HOM05D007112 ORTHO05D008930 2.0e-50 203.4 221 43.0
ECA247G2139 Erigeron canadensis HOM05D000092 ORTHO05D008930 3.3e-50 202.6 237 46.8
MSTRG.18505 Avicennia marina HOM05D007112 ORTHO05D008930 4.4e-50 202.2 232 47.8
HanXRQChr08g0231791 Helianthus annuus HOM05D007112 ORTHO05D008930 4.4e-50 202.2 224 47.3
Lalb_Chr07g0194661 Lupinus albus HOM05D007112 ORTHO05D008930 5.7e-50 201.8 226 47.3
Carub.0003s0707 Capsella rubella HOM05D007112 ORTHO05D008930 9.7e-50 201.1 228 47.8
Solyc09g047840.3 Solanum lycopersicum HOM05D007112 ORTHO05D008930 9.7e-50 201.1 228 43.0
Sopen09g015950 Solanum pennellii HOM05D007112 ORTHO05D008930 1.3e-49 200.7 228 42.5
Ca_23159_v3 Cicer arietinum L. HOM05D007112 ORTHO05D008930 2.8e-49 199.5 228 47.4
BraA05t22800Z Brassica rapa HOM05D007112 ORTHO05D008930 3.7e-49 199.1 223 48.4
Sp3g06430 Schrenkiella parvula HOM05D007112 ORTHO05D008930 3.7e-49 199.1 228 46.1
Glyma.03G097000 Glycine max HOM05D007112 ORTHO05D008930 6.3e-49 198.4 226 46.5
Phvul.010G036300 Phaseolus vulgaris HOM05D007112 ORTHO05D008930 8.2e-49 198.0 222 45.5
PSO732G0401 Papaver somniferum HOM05D007112 ORTHO05D008930 1.4e-48 197.2 247 44.9
BcaC05g29544 Brassica carinata HOM05D007112 ORTHO05D008930 3.1e-48 196.1 221 48.9
CiPaw.14G038400 Carya illinoinensis HOM05D007112 ORTHO05D008930 3.1e-48 196.1 192 52.6
A05p40690 Brassica napus HOM05D007112 ORTHO05D008930 4.1e-48 195.7 224 47.8
Glyma.07G124300 Glycine max HOM05D007112 ORTHO05D008930 9.1e-48 194.5 226 44.2
Aa31LG5G18060 Aethionema arabicum HOM05D007112 ORTHO05D008930 1.6e-47 193.7 238 47.9
CARHR082180 Cardamine hirsuta HOM05D007112 ORTHO05D008930 1.6e-47 193.7 223 48.0
SHI30551 Sapria himalayana HOM05D007112 ORTHO05D008930 2.0e-47 193.4 230 43.5
Thhalv10022158m.g Eutrema salsugineum HOM05D007112 ORTHO05D008930 4.5e-47 192.2 224 49.1
BolC5t34634H Brassica oleracea HOM05D007112 ORTHO05D008930 1.3e-46 190.7 224 48.2
Lsat_1_v5_gn_9_16901 Lactuca sativa HOM05D007112 ORTHO05D008930 1.7e-46 190.3 228 43.9
arahy.Tifrunner.gnm1.ann1.X2Q8CL Arachis hypogaea HOM05D007112 ORTHO05D008930 2.2e-46 189.9 223 43.9
Hma1.2p1_1043F.1_g251290 Hydrangea macrophylla HOM05D007112 ORTHO05D008930 5.0e-46 188.7 136 64.0
ATR0752G208 Amborella trichopoda HOM05D007112 ORTHO05D008930 1.1e-45 187.6 214 46.7
Nn7g37436 Nelumbo nucifera HOM05D007112 ORTHO05D008930 1.5e-45 187.2 175 53.7
C05p59800 Brassica napus HOM05D007112 ORTHO05D008930 7.2e-45 184.9 224 47.8
Sc24g0003360 Simmondsia chinensis HOM05D007112 ORTHO05D008930 2.1e-44 183.3 219 45.7
AT3G07525 Arabidopsis thaliana HOM05D007112 ORTHO05D008930 2.7e-44 183.0 223 43.9
unitig_60.g25572 Utricularia gibba HOM05D007112 ORTHO05D008930 8.0e-44 181.4 225 43.6
MELO3C021125.2 Cucumis melo HOM05D007112 ORTHO05D008930 1.0e-43 181.0 159 53.5
Ah.11g050810 Amaranthus hybridus HOM05D007112 ORTHO05D008930 7.5e-42 174.9 220 43.2
Zm00001eb425740 Zea mays HOM05D007112 ORTHO05D008930 7.0e-40 168.3 232 40.9
HPP92_001291 Vanilla planifolia HOM05D007112 ORTHO05D008930 5.5e-37 158.7 223 40.4
CDE05G1497 Ceratophyllum demersum HOM05D007112 ORTHO05D008930 1.2e-34 151.0 135 54.1
CAN.G50.11 Capsicum annuum HOM05D007112 ORTHO05D008930 4.4e-34 149.1 113 58.4
DCAR_018609 Daucus carota HOM05D007112 ORTHO05D008930 4.5e-31 139.0 169 46.7
Os04g0497350 Oryza sativa ssp. japonica HOM05D007112 ORTHO05D008930 4.2e-29 132.5 218 37.2
HanXRQChr03g0082541 Helianthus annuus HOM05D007112 ORTHO05D008930 3.6e-28 129.4 109 57.8
AagrBONN_evm.TU.Sc2ySwM_344.2017 Anthoceros agrestis HOM05D007112 ORTHO05D008930 6.1e-28 128.6 194 37.6
MBI10_g35388_MAGBIO Magnolia biondii HOM05D007112 ORTHO05D008930 2.3e-27 126.7 265 31.3
Pp3c26_2050 Physcomitrium patens HOM05D007112 ORTHO05D008930 2.8e-25 119.8 185 38.4
Mapoly0002s0314 Marchantia polymorpha HOM05D007112 ORTHO05D008930 7.0e-24 115.2 184 33.2
Haze_03375 Corylus avellana HOM05D007112 ORTHO05D008930 5.0e-22 109.0 150 38.7
EL10Ac5g10586 Beta vulgaris HOM05D007112 ORTHO05D008930 2.0e-18 97.1 88 54.5
Cpa.g.sc8.40 Carica papaya HOM05D007112 ORTHO05D008930 4.4e-18 95.9 140 42.9
MD10G1148000 Malus domestica HOM05D007112 ORTHO05D008930 4.9e-17 92.4 125 44.0
SMO141G0021 Selaginella moellendorffii HOM05D007112 ORTHO05D008930 1.2e-15 87.8 233 27.9
SGA_v2.0_scaffold29G12307 Striga asiatica HOM05D007112 ORTHO05D008930 1.5e-13 80.9 150 36.0
CDE05G2169 Ceratophyllum demersum HOM05D007112 ORTHO05D008930 3.6e-12 76.3 142 36.6
EL10Ac5g10588 Beta vulgaris HOM05D007112 ORTHO05D008930 4.7e-12 75.9 62 56.5
Haze_03371 Corylus avellana HOM05D007112 ORTHO05D008930 2.0e-07 60.5 103 35.9
Haze_03374 Corylus avellana HOM05D000072 ORTHO05D000026 1.7e-06 57.4 108 34.3


User provided reference genes

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