Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGR044G0982 Punica granatum HOM05D001111 ORTHO05D000939 6.6e-142 507.3 243 100.0
Cpa.g.sc76.61 Carica papaya HOM05D001111 ORTHO05D000939 2.0e-13 80.5 158 36.1
PGSC0003DMG400045223 Solanum tuberosum HOM05D001111 ORTHO05D000939 2.0e-13 80.5 202 33.2
SalBow5G0542 Salvia bowleyana HOM05D001111 ORTHO05D000939 4.4e-13 79.3 186 34.4
Duzib205G1255 Durio zibethinus HOM05D001111 ORTHO05D000939 7.5e-13 78.6 189 30.7
Migut.I00012 Erythranthe guttata HOM05D001111 ORTHO05D000939 7.5e-13 78.6 195 34.4
MSTRG.11451 Avicennia marina HOM05D001111 ORTHO05D000939 9.8e-13 78.2 157 37.6
SalBow5G1950 Salvia bowleyana HOM05D001111 ORTHO05D000939 1.3e-12 77.8 186 33.9
Lj9P449T21 Lonicera japonica HOM05D001111 ORTHO05D000939 3.7e-12 76.3 139 38.8
CiPaw.05G151600 Carya illinoinensis HOM05D001111 ORTHO05D000939 6.4e-12 75.5 154 33.1
DCAR_021569 Daucus carota HOM05D001111 ORTHO05D000939 1.9e-11 73.9 178 33.7
Potri.015G076400 Populus trichocarpa HOM05D001111 ORTHO05D000939 1.9e-11 73.9 146 35.6
MSTRG.23129 Avicennia marina HOM05D001111 ORTHO05D000939 2.0e-10 70.5 154 33.8
Dinv02893 Davidia involucrata HOM05D001111 ORTHO05D000939 2.0e-10 70.5 218 33.5
Lalb_Chr23g0273221 Lupinus albus HOM05D001111 ORTHO05D000939 2.0e-10 70.5 184 34.2
Manes.14G065800 Manihot esculenta HOM05D001111 ORTHO05D000939 2.0e-10 70.5 163 32.5
MBI16_g32208_MAGBIO Magnolia biondii HOM05D001111 ORTHO05D000939 2.7e-10 70.1 199 31.7
PGR083G0859 Punica granatum HOM05D001111 ORTHO05D000939 2.7e-10 70.1 158 34.2
Duzib068G0287 Durio zibethinus HOM05D001111 ORTHO05D000939 3.5e-10 69.7 158 34.2
TWI23G0219 Tripterygium wilfordii HOM05D001111 ORTHO05D000939 3.5e-10 69.7 198 34.8
FAN17G1475 Fragaria x ananassa HOM05D001111 ORTHO05D000939 4.6e-10 69.3 148 36.5
Manes.06G104800 Manihot esculenta HOM05D001111 ORTHO05D000939 4.6e-10 69.3 156 34.0
TWI31G0459 Tripterygium wilfordii HOM05D001111 ORTHO05D000939 4.6e-10 69.3 180 33.3
CARHR276560 Cardamine hirsuta HOM05D001111 ORTHO05D000939 1.3e-09 67.8 152 29.6
SGA_v2.0_scaffold25G10842 Striga asiatica HOM05D001111 ORTHO05D000939 1.3e-09 67.8 160 36.2
THA.LOC104818236 Tarenaya hassleriana HOM05D001111 ORTHO05D000939 1.3e-09 67.8 206 29.6
Sc04g0001810 Simmondsia chinensis HOM05D001111 ORTHO05D000939 2.3e-09 67.0 155 33.5
Cc04_g14080 Coffea canephora HOM05D001111 ORTHO05D000939 3.0e-09 66.6 154 33.1
DCAR_016484 Daucus carota HOM05D001111 ORTHO05D000939 3.0e-09 66.6 146 35.6
Prupe.1G253100 Prunus persica HOM05D001111 ORTHO05D000939 3.0e-09 66.6 156 35.3
Sabra15G0101500 Salix brachista HOM05D001111 ORTHO05D000939 3.0e-09 66.6 147 35.4
SGA_v2.0_scaffold90G27938 Striga asiatica HOM05D001111 ORTHO05D000939 3.0e-09 66.6 147 34.0
Oeu040830.1 Olea europaea HOM05D001111 ORTHO05D000939 3.9e-09 66.2 155 35.5
Oeu040831.1 Olea europaea HOM05D001111 ORTHO05D000939 3.9e-09 66.2 155 35.5
Thecc.03G012600 Theobroma cacao HOM05D001111 ORTHO05D000939 3.9e-09 66.2 235 28.5
Atru.chr9.2477 Acer truncatum HOM05D001111 ORTHO05D000939 5.0e-09 65.9 150 33.3
CiPaw.12G026500 Carya illinoinensis HOM05D001111 ORTHO05D000939 5.0e-09 65.9 141 31.2
Carub.0008s2350 Capsella rubella HOM05D001111 ORTHO05D000939 8.6e-09 65.1 148 30.4
Nitab4.5_0001017g0090 Nicotiana tabacum HOM05D001111 ORTHO05D000939 8.6e-09 65.1 217 32.3
Potri.012G081000 Populus trichocarpa HOM05D001111 ORTHO05D000939 8.6e-09 65.1 147 34.7
Sopen06g027760 Solanum pennellii HOM05D001111 ORTHO05D000939 8.6e-09 65.1 143 33.6
BolC9t53796H Brassica oleracea HOM05D001111 ORTHO05D000939 1.1e-08 64.7 154 28.6
Eucgr.B00315 Eucalyptus grandis HOM05D001111 ORTHO05D000939 1.1e-08 64.7 147 34.0
Phvul.009G178600 Phaseolus vulgaris HOM05D001111 ORTHO05D000939 1.1e-08 64.7 160 35.0
HanXRQChr05g0156231 Helianthus annuus HOM05D001111 ORTHO05D000939 1.5e-08 64.3 143 33.6
TWI39G0739 Tripterygium wilfordii HOM05D001111 ORTHO05D000939 1.5e-08 64.3 180 32.2
Aqoxy3G02945 Aquilegia oxysepala HOM05D001111 ORTHO05D000939 1.9e-08 63.9 140 35.0
BcaC01g02520 Brassica carinata HOM05D001111 ORTHO05D000939 1.9e-08 63.9 217 30.0
C03p63950 Brassica napus HOM05D001111 ORTHO05D000939 1.9e-08 63.9 217 30.0
BolC3t18649H Brassica oleracea HOM05D001111 ORTHO05D000939 1.9e-08 63.9 217 30.0
FAN04G3199 Fragaria x ananassa HOM05D001111 ORTHO05D000939 1.9e-08 63.9 173 31.8
FAN22G0614 Fragaria x ananassa HOM05D001111 ORTHO05D000939 1.9e-08 63.9 142 35.9
Oeu022162.1 Olea europaea HOM05D001111 ORTHO05D000939 1.9e-08 63.9 157 33.1
FvH4_4g34370 Fragaria vesca HOM05D001111 ORTHO05D000939 2.5e-08 63.5 142 35.9
FAN08G1819 Fragaria x ananassa HOM05D001111 ORTHO05D000939 2.5e-08 63.5 170 31.8
FAN12G3240 Fragaria x ananassa HOM05D001111 ORTHO05D000939 2.5e-08 63.5 142 35.9
MSTRG.4373 Avicennia marina HOM05D001111 ORTHO05D000939 3.3e-08 63.2 156 31.4
DCAR_026134 Daucus carota HOM05D001111 ORTHO05D000939 4.3e-08 62.8 156 31.4
Hma1.2p1_0176F.1_g077400 Hydrangea macrophylla HOM05D001111 ORTHO05D000939 4.3e-08 62.8 136 33.1
C09p08840 Brassica napus HOM05D001111 ORTHO05D000939 5.6e-08 62.4 154 28.6
Sabra12G0057900 Salix brachista HOM05D001111 ORTHO05D000939 5.6e-08 62.4 139 35.3
FAN07G0616 Fragaria x ananassa HOM05D001111 ORTHO05D000939 7.3e-08 62.0 141 34.8
BcaC04g23394 Brassica carinata HOM05D001111 ORTHO05D000939 9.5e-08 61.6 154 28.6
ECA246G3140 Erigeron canadensis HOM05D001111 ORTHO05D000939 9.5e-08 61.6 145 32.4
FvH4_5g05310 Fragaria vesca HOM05D001111 ORTHO05D000939 9.5e-08 61.6 165 30.9
FAN18G1119 Fragaria x ananassa HOM05D001111 ORTHO05D000939 9.5e-08 61.6 165 30.9
Ah.02g110500 Amaranthus hybridus HOM05D001111 ORTHO05D000939 1.2e-07 61.2 158 31.0
CiPaw.11G026300 Carya illinoinensis HOM05D001111 ORTHO05D000939 1.2e-07 61.2 146 32.9
AL8G39740 Arabidopsis lyrata HOM05D001111 ORTHO05D000939 1.6e-07 60.8 217 27.6
CAN.G781.10 Capsicum annuum HOM05D001111 ORTHO05D000939 1.6e-07 60.8 156 34.0
QL03p060170 Quercus lobata HOM05D001111 ORTHO05D000939 1.6e-07 60.8 143 35.7
Ciclev10021025m.g Citrus clementina HOM05D001111 ORTHO05D000939 2.1e-07 60.5 160 28.8
COL.COLO4_30037 Corchorus olitorius HOM05D001111 ORTHO05D000939 2.1e-07 60.5 165 30.3
FAN18G2882 Fragaria x ananassa HOM05D001111 ORTHO05D000939 2.1e-07 60.5 163 31.3
TAR629G2362 Trochodendron aralioides HOM05D001111 ORTHO05D000939 2.1e-07 60.5 204 31.4
VMungo1309G2238 Vigna mungo HOM05D001111 ORTHO05D000939 2.8e-07 60.1 157 33.1
ClCG01G013130 Citrullus lanatus HOM05D001111 ORTHO05D000939 3.6e-07 59.7 168 33.3
Glyma.04G183300 Glycine max HOM05D001111 ORTHO05D000939 3.6e-07 59.7 149 33.6
Aa31LG11G910 Aethionema arabicum HOM05D001111 ORTHO05D000939 4.7e-07 59.3 216 30.1
CAN.G628.80 Capsicum annuum HOM05D001111 ORTHO05D000939 4.7e-07 59.3 139 29.5
MELO3C002262.2 Cucumis melo HOM05D001111 ORTHO05D000939 4.7e-07 59.3 169 31.4
TAR371G1086 Trochodendron aralioides HOM05D001111 ORTHO05D000939 4.7e-07 59.3 140 33.6
Lj5P124T59 Lonicera japonica HOM05D001111 ORTHO05D000939 6.2e-07 58.9 137 35.8
Nn4g22768 Nelumbo nucifera HOM05D001111 ORTHO05D000939 6.2e-07 58.9 128 34.4
Rhsim08G0172000 Rhododendron simsii HOM05D001111 ORTHO05D000939 6.2e-07 58.9 155 31.0
A09p07840 Brassica napus HOM05D001111 ORTHO05D000939 8.0e-07 58.5 153 29.4
CsaV3_1G008460 Cucumis sativus L. HOM05D001111 ORTHO05D000939 8.0e-07 58.5 170 31.8
MD16G1093500 Malus domestica HOM05D001111 ORTHO05D000939 8.0e-07 58.5 155 34.2
Nitab4.5_0007719g0040 Nicotiana tabacum HOM05D001111 ORTHO05D000939 8.0e-07 58.5 142 34.5
CANSAT01G0717 Cannabis sativa HOM05D001111 ORTHO05D000939 1.1e-06 58.2 177 31.1
Nitab4.5_0009783g0040 Nicotiana tabacum HOM05D001111 ORTHO05D000939 1.1e-06 58.2 143 33.6
TAR622G0132 Trochodendron aralioides HOM05D001111 ORTHO05D000939 1.4e-06 57.8 140 33.6
Oeu060136.1 Olea europaea HOM05D001111 ORTHO05D000939 1.8e-06 57.4 139 30.9
THA.LOC104821458 Tarenaya hassleriana HOM05D001111 ORTHO05D000939 1.8e-06 57.4 167 26.9
CSS0041124 Camellia sinensis var. sinensis HOM05D001111 ORTHO05D000939 2.3e-06 57.0 151 31.8
CDE04G3478 Ceratophyllum demersum HOM05D000875 ORTHO05D000684 2.3e-06 57.0 170 30.0
Solyc03g114350.1 Solanum lycopersicum HOM05D001111 ORTHO05D000939 2.3e-06 57.0 152 34.2
SGA_v2.0_scaffold7G04133 Striga asiatica HOM05D001111 ORTHO05D000939 2.3e-06 57.0 163 35.0
AT5G62770 Arabidopsis thaliana HOM05D001111 ORTHO05D000939 3.1e-06 56.6 220 26.4
PGSC0003DMG400024504 Solanum tuberosum HOM05D001111 ORTHO05D000939 3.1e-06 56.6 142 35.2
BcaC01g02521 Brassica carinata HOM05D001111 ORTHO05D000939 5.2e-06 55.8 174 32.8
CDE06G1645 Ceratophyllum demersum HOM05D000875 ORTHO05D000939 5.2e-06 55.8 159 30.2
Thhalv10005715m.g Eutrema salsugineum HOM05D001111 ORTHO05D000939 6.8e-06 55.5 218 29.4
Sopen03g033450 Solanum pennellii HOM05D001111 ORTHO05D000939 6.8e-06 55.5 142 35.2
CDE07G0471 Ceratophyllum demersum HOM05D001111 ORTHO05D000939 8.9e-06 55.1 156 30.1
Sp5g25500 Schrenkiella parvula HOM05D001111 ORTHO05D000939 8.9e-06 55.1 144 29.9
HPP92_020279 Vanilla planifolia HOM05D001111 ORTHO05D000939 8.9e-06 55.1 188 26.6


User provided reference genes

Program Settings