Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGR044G0970 Punica granatum HOM05D007806 ORTHO05D009818 2.9e-229 798.1 375 100.0
QL10p035646 Quercus lobata HOM05D007806 ORTHO05D009818 4.5e-166 588.2 372 72.0
Cfa017816 Carpinus fangiana HOM05D007806 ORTHO05D009818 1.3e-160 570.1 371 71.4
RcHm_v2.0_Chr7g0176861 Rosa chinensis HOM05D007806 ORTHO05D009818 3.1e-159 565.5 371 69.3
GSVIVG01024230001 Vitis vinifera HOM05D007806 ORTHO05D009818 3.8e-157 558.5 379 68.9
MD06G1241600 Malus domestica HOM05D007806 ORTHO05D009818 1.1e-156 557.0 339 73.5
Glyma.16G209900 Glycine max HOM05D007806 ORTHO05D009818 4.2e-156 555.1 339 74.0
Manes.01G159900 Manihot esculenta HOM05D007806 ORTHO05D009818 4.2e-156 555.1 361 70.9
Prupe.5G246200 Prunus persica HOM05D007806 ORTHO05D009818 4.2e-156 555.1 339 73.5
Duzib084G0683 Durio zibethinus HOM05D007806 ORTHO05D009818 1.6e-155 553.1 359 71.0
Ca_25289_v3 Cicer arietinum L. HOM05D007806 ORTHO05D009818 2.1e-155 552.7 339 73.2
DCAR_011398 Daucus carota HOM05D007806 ORTHO05D009818 6.1e-155 551.2 333 73.3
Medtr6g069050 Medicago truncatula HOM05D007806 ORTHO05D009818 6.1e-155 551.2 349 70.5
Nn3g18521 Nelumbo nucifera HOM05D007806 ORTHO05D009818 6.1e-155 551.2 371 68.7
Cpa.g.sc829.2 Carica papaya HOM05D007806 ORTHO05D009818 1.4e-154 550.1 369 68.6
Haze_18394 Corylus avellana HOM05D007806 ORTHO05D009818 1.8e-154 549.7 409 64.5
Lj2g0014387 Lotus japonicus HOM05D007806 ORTHO05D009818 1.8e-154 549.7 378 69.3
Psat1g118160 Pisum sativum HOM05D007806 ORTHO05D009818 4.0e-154 548.5 345 71.6
Potri.017G154900 Populus trichocarpa HOM05D007806 ORTHO05D009818 8.8e-154 547.4 322 75.5
Gorai.008G293400 Gossypium raimondii HOM05D007806 ORTHO05D009818 9.7e-153 543.9 343 70.8
Phvul.004G135900 Phaseolus vulgaris HOM05D007806 ORTHO05D009818 9.7e-153 543.9 344 71.2
Lalb_Chr22g0354101 Lupinus albus HOM05D007806 ORTHO05D009818 1.7e-152 543.1 347 70.0
Sed0012569 Sechium edule HOM05D007806 ORTHO05D009818 2.8e-152 542.3 337 72.1
VMungo0464G0928 Vigna mungo HOM05D007806 ORTHO05D009818 3.7e-152 542.0 387 65.1
ClCG01G014670 Citrullus lanatus HOM05D007806 ORTHO05D009818 8.3e-152 540.8 335 71.6
Peaxi162Scf00171g00027 Petunia axillaris HOM05D007806 ORTHO05D009818 7.0e-151 537.7 372 66.4
FAN13G2940 Fragaria x ananassa HOM05D007806 ORTHO05D009818 9.1e-151 537.3 339 70.5
FAN08G1708 Fragaria x ananassa HOM05D007806 ORTHO05D009818 1.6e-150 536.6 339 69.9
PSO782G4489 Papaver somniferum HOM05D007806 ORTHO05D009818 2.2e-149 532.7 354 67.5
PSO063G6352 Papaver somniferum HOM05D007806 ORTHO05D009818 8.5e-149 530.8 353 67.4
Aqoxy3G04345 Aquilegia oxysepala HOM05D007806 ORTHO05D009818 1.1e-148 530.4 326 72.7
Oeu034419.1 Olea europaea HOM05D007806 ORTHO05D009818 1.9e-148 529.6 382 65.2
MSTRG.4314 Avicennia marina HOM05D007806 ORTHO05D009818 3.2e-148 528.9 338 71.3
CAN.G861.15 Capsicum annuum HOM05D007806 ORTHO05D009818 4.2e-148 528.5 352 67.3
SalBow2G1738 Salvia bowleyana HOM05D007806 ORTHO05D009818 9.4e-148 527.3 350 67.4
PGSC0003DMG400015208 Solanum tuberosum HOM05D007806 ORTHO05D009818 3.0e-146 522.3 347 67.1
Sopen03g029810 Solanum pennellii HOM05D007806 ORTHO05D009818 4.0e-146 521.9 347 66.9
CiPaw.16G075900 Carya illinoinensis HOM05D007806 ORTHO05D009818 1.2e-145 520.4 301 74.8
Migut.C00455 Erythranthe guttata HOM05D007806 ORTHO05D009818 1.2e-145 520.4 337 70.9
Solyc03g019810.3 Solanum lycopersicum HOM05D007806 ORTHO05D009818 1.2e-145 520.4 347 66.9
Nitab4.5_0004170g0010 Nicotiana tabacum HOM05D007806 ORTHO05D009818 2.0e-145 519.6 373 65.7
Nitab4.5_0009307g0070 Nicotiana tabacum HOM05D007806 ORTHO05D009818 2.8e-144 515.8 392 62.5
Sc18g0002780 Simmondsia chinensis HOM05D007806 ORTHO05D009818 1.4e-143 513.5 374 64.7
arahy.Tifrunner.gnm1.ann1.T8W9V5 Arachis hypogaea HOM05D007806 ORTHO05D009818 4.1e-143 511.9 378 66.7
MELO3C002184.2 Cucumis melo HOM05D007806 ORTHO05D009818 2.0e-142 509.6 407 60.7
ATR0124G050 Amborella trichopoda HOM05D007806 ORTHO05D009818 8.6e-141 504.2 322 69.6
TAR629G0023 Trochodendron aralioides HOM05D007806 ORTHO05D009818 9.5e-140 500.7 300 73.7
EL10Ac8g18997 Beta vulgaris HOM05D007806 ORTHO05D009818 6.1e-139 498.0 346 65.3
Gohir.A12G272200 Gossypium hirsutum HOM05D007806 ORTHO05D009818 3.0e-138 495.7 344 66.9
MBI06_g39055_MAGBIO Magnolia biondii HOM05D007806 ORTHO05D009818 2.0e-137 493.0 328 69.5
AUR62028303 Chenopodium quinoa HOM05D007806 ORTHO05D009818 2.3e-133 479.6 356 61.8
CsaV3_1G007660 Cucumis sativus L. HOM05D007806 ORTHO05D009818 3.1e-130 469.2 319 68.0
Cc00_g01520 Coffea canephora HOM05D007806 ORTHO05D009818 2.9e-128 462.6 272 74.6
Thecc.03G069700 Theobroma cacao HOM05D007806 ORTHO05D009818 1.9e-127 459.9 310 69.7
Dinv11740 Davidia involucrata HOM05D007806 ORTHO05D009818 3.2e-127 459.1 368 60.6
Gohir.D12G273000 Gossypium hirsutum HOM05D007806 ORTHO05D009818 7.0e-127 458.0 296 70.9
Os10g0492800 Oryza sativa ssp. japonica HOM05D007806 ORTHO05D009818 4.6e-126 455.3 327 63.6
FAN04G0377 Fragaria x ananassa HOM05D007806 ORTHO05D009818 5.0e-125 451.8 323 65.9
Sabra17G0126600 Salix brachista HOM05D007806 ORTHO05D009818 5.0e-125 451.8 388 58.2
Zm00001eb044870 Zea mays HOM05D007806 ORTHO05D009818 2.3e-122 443.0 320 64.4
Zm00001eb221100 Zea mays HOM05D007806 ORTHO05D009818 5.2e-122 441.8 320 64.1
Lj5A169T96 Lonicera japonica HOM05D007806 ORTHO05D009818 3.7e-120 435.6 306 67.3
Ciclev10021108m.g Citrus clementina HOM05D007806 ORTHO05D009818 1.1e-119 434.1 373 59.5
AUR62025297 Chenopodium quinoa HOM05D007806 ORTHO05D009818 1.4e-119 433.7 329 60.2
FAN18G2497 Fragaria x ananassa HOM05D007806 ORTHO05D009818 7.1e-119 431.4 358 58.9
Pp3c4_4360 Physcomitrium patens HOM05D007806 ORTHO05D009818 5.8e-113 411.8 321 57.9
AagrBONN_evm.TU.Sc2ySwM_228.2978 Anthoceros agrestis HOM05D007806 ORTHO05D009818 1.1e-111 407.5 358 53.4
Mapoly0132s0022 Marchantia polymorpha HOM05D007806 ORTHO05D009818 4.1e-111 405.6 334 51.8
SMO358G0653 Selaginella moellendorffii HOM05D007806 ORTHO05D009818 1.1e-103 380.9 315 54.3
Ah.14g084760 Amaranthus hybridus HOM05D007806 ORTHO05D009818 9.3e-103 377.9 241 69.7
arahy.Tifrunner.gnm1.ann1.L8FXMQ Arachis hypogaea HOM05D007806 ORTHO05D009818 1.6e-102 377.1 313 61.7
MCO09G069 Micromonas commoda HOM05D007806 ORTHO05D009818 1.3e-72 277.7 343 41.1
TPR.G13520 Trifolium pratense HOM05D007806 ORTHO05D009818 6.1e-70 268.9 146 78.8
PRCOL_00005749 Prasinoderma coloniale HOM05D007806 ORTHO05D009818 5.9e-65 252.3 395 35.9
TPR.G35264 Trifolium pratense HOM05D007806 ORTHO05D009818 1.2e-62 244.6 172 66.9
COL.COLO4_22320 Corchorus olitorius HOM05D007806 ORTHO05D009818 2.4e-58 230.3 168 65.5
Hund08555 Selenicereus undatus HOM05D007806 ORTHO05D009818 3.0e-53 213.4 128 73.4
SEGI_35085 Sequoiadendron giganteum HOM05D007806 ORTHO05D009818 1.8e-50 204.1 138 65.2
arahy.Tifrunner.gnm1.ann1.XB21YC Arachis hypogaea HOM05D007806 ORTHO05D009818 1.2e-38 164.9 135 57.8
TWI81G0807 Tripterygium wilfordii HOM05D007806 ORTHO05D009818 3.0e-37 160.2 132 60.6
PRCOL_00003744 Prasinoderma coloniale HOM05D007806 ORTHO05D009818 1.1e-34 151.8 350 31.1
Atru.chr9.53 Acer truncatum HOM05D007806 ORTHO05D009818 1.7e-27 127.9 83 68.7
Cre07.g339450 Chlamydomonas reinhardtii HOM05D007806 ORTHO05D009818 6.3e-27 125.9 301 28.2
Atru.chr9.50 Acer truncatum HOM05D007806 ORTHO05D009818 3.8e-24 116.7 59 84.7
Cre06.g271188 Chlamydomonas reinhardtii HOM05D007806 ORTHO05D009818 3.9e-16 90.1 163 35.0
arahy.Tifrunner.gnm1.ann1.GAXP8C Arachis hypogaea HOM05D007806 ORTHO05D009818 3.2e-10 70.5 42 73.8
GSVIVG01024233001 Vitis vinifera HOM05D000001 ORTHO05D000003 1.3e-08 65.1 43 69.8
Atru.chr9.51 Acer truncatum HOM05D007806 ORTHO05D009818 2.1e-06 57.8 41 58.5


User provided reference genes

Program Settings