Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGR044G0956 Punica granatum HOM05D005158 ORTHO05D005510 5.4e-96 354.4 185 100.0
CSS0029687 Camellia sinensis var. sinensis HOM05D005158 ORTHO05D005510 1.4e-40 170.2 332 38.0
Dinv27619 Davidia involucrata HOM05D005158 ORTHO05D005510 8.8e-38 161.0 331 36.9
QL10p028515 Quercus lobata HOM05D005158 ORTHO05D005510 2.0e-37 159.8 333 35.7
Thecc.03G054800 Theobroma cacao HOM05D005158 ORTHO05D005510 7.4e-37 157.9 336 36.0
COL.COLO4_37683 Corchorus olitorius HOM05D000282 ORTHO05D005510 1.3e-36 157.1 336 35.1
RcHm_v2.0_Chr7g0178481 Rosa chinensis HOM05D005158 ORTHO05D005510 1.3e-36 157.1 334 35.3
Ciclev10008271m.g Citrus clementina HOM05D005158 ORTHO05D005510 8.2e-36 154.5 335 34.3
FAN04G1228 Fragaria x ananassa HOM05D005158 ORTHO05D005510 6.9e-35 151.4 333 34.5
Atru.chr9.1740 Acer truncatum HOM05D005158 ORTHO05D005510 4.5e-34 148.7 196 48.0
FvH4_5g17290 Fragaria vesca HOM05D005158 ORTHO05D005510 4.5e-34 148.7 333 34.5
TAR374G1701 Trochodendron aralioides HOM05D005158 ORTHO05D005510 1.3e-33 147.1 333 33.9
MD06G1226600 Malus domestica HOM05D005158 ORTHO05D005510 1.7e-33 146.7 333 34.5
CiPaw.15G143000 Carya illinoinensis HOM05D005158 ORTHO05D005510 2.9e-33 146.0 332 34.9
GSVIVG01008427001 Vitis vinifera HOM05D005158 ORTHO05D005510 1.4e-32 143.7 334 33.5
Duzib251G0375 Durio zibethinus HOM05D005158 ORTHO05D005510 3.2e-32 142.5 329 31.9
QL03p033448 Quercus lobata HOM05D005158 ORTHO05D005510 4.2e-32 142.1 333 33.9
FAN18G0401 Fragaria x ananassa HOM05D005158 ORTHO05D005510 7.2e-32 141.4 196 44.9
Dinv28033 Davidia involucrata HOM05D005158 ORTHO05D005510 1.2e-31 140.6 196 43.4
CSS0029988 Camellia sinensis var. sinensis HOM05D005158 ORTHO05D005510 3.6e-31 139.0 196 44.4
Nn4g24217 Nelumbo nucifera HOM05D005158 ORTHO05D005510 6.1e-31 138.3 196 41.8
COL.COLO4_13149 Corchorus olitorius HOM05D005158 ORTHO05D005510 7.9e-31 137.9 196 41.3
Haze_18844 Corylus avellana HOM05D005158 ORTHO05D005510 1.4e-30 137.1 331 32.6
Duzib205G1388 Durio zibethinus HOM05D005158 ORTHO05D005510 1.8e-30 136.7 336 33.0
Sabra10G0081500 Salix brachista HOM05D005158 ORTHO05D005510 2.3e-30 136.3 333 33.0
Actinidia36249 Actinidia chinensis HOM05D005158 ORTHO05D005510 3.0e-30 136.0 331 32.9
Potri.010G111100 Populus trichocarpa HOM05D005158 ORTHO05D005510 3.0e-30 136.0 196 42.3
Aqoxy3G00071 Aquilegia oxysepala HOM05D005158 ORTHO05D005510 3.9e-30 135.6 332 32.5
GSVIVG01011734001 Vitis vinifera HOM05D005158 ORTHO05D005510 3.9e-30 135.6 332 32.2
Sabra15G0037900 Salix brachista HOM05D005158 ORTHO05D005510 6.7e-30 134.8 196 42.9
Sc14g0007050 Simmondsia chinensis HOM05D005158 ORTHO05D005510 8.8e-30 134.4 194 42.3
CiPaw.05G195800 Carya illinoinensis HOM05D005158 ORTHO05D005510 1.1e-29 134.0 196 40.3
PSO478G5200 Papaver somniferum HOM05D005158 ORTHO05D005510 1.1e-29 134.0 196 40.3
Rhsim09G0065800 Rhododendron simsii HOM05D005158 ORTHO05D005510 1.5e-29 133.7 196 44.4
Rhsim09G0065900 Rhododendron simsii HOM05D005158 ORTHO05D005510 1.5e-29 133.7 196 43.9
RcHm_v2.0_Chr4g0441611 Rosa chinensis HOM05D005158 ORTHO05D005510 3.3e-29 132.5 333 32.4
Sc14g0006290 Simmondsia chinensis HOM05D005158 ORTHO05D005510 3.3e-29 132.5 326 32.8
Prupe.1G327200 Prunus persica HOM05D005158 ORTHO05D005510 4.4e-29 132.1 333 31.2
HanXRQChr08g0212241 Helianthus annuus HOM05D005158 ORTHO05D005510 7.4e-29 131.3 333 31.8
PSO017G1154 Papaver somniferum HOM05D005158 ORTHO05D005510 7.4e-29 131.3 196 39.8
vmacro00408 Vaccinium macrocarpon HOM05D005158 ORTHO05D005510 7.4e-29 131.3 196 42.9
TWI75G0580 Tripterygium wilfordii HOM05D005158 ORTHO05D005510 1.3e-28 130.6 196 40.8
FvH4_4g32690 Fragaria vesca HOM05D005158 ORTHO05D005510 2.2e-28 129.8 333 32.1
Manes.17G078700 Manihot esculenta HOM05D005158 ORTHO05D005510 2.2e-28 129.8 333 30.6
CSS0001942 Camellia sinensis var. sinensis HOM05D005158 ORTHO05D005510 3.7e-28 129.0 196 41.3
Cc04_g06310 Coffea canephora HOM05D005158 ORTHO05D005510 3.7e-28 129.0 196 43.4
Cfa008628 Carpinus fangiana HOM05D005158 ORTHO05D005510 4.8e-28 128.6 196 41.3
Eucgr.G02179 Eucalyptus grandis HOM05D005158 ORTHO05D005510 6.3e-28 128.3 196 40.3
FAN17G2123 Fragaria x ananassa HOM05D005158 ORTHO05D005510 8.2e-28 127.9 333 31.8
FAN12G3950 Fragaria x ananassa HOM05D005158 ORTHO05D005510 1.1e-27 127.5 333 31.8
MD16G1026300 Malus domestica HOM05D005158 ORTHO05D005510 2.4e-27 126.3 328 30.5
Ciclev10015117m.g Citrus clementina HOM05D005158 ORTHO05D005510 3.1e-27 125.9 333 31.8
Lsat_1_v5_gn_8_45001 Lactuca sativa HOM05D005158 ORTHO05D005510 4.1e-27 125.6 197 42.1
CANSAT64G2776 Cannabis sativa HOM05D005158 ORTHO05D005510 7.0e-27 124.8 198 37.9
PGR119G0382 Punica granatum HOM05D005158 ORTHO05D005510 7.0e-27 124.8 330 31.2
Sopen05g014580 Solanum pennellii HOM05D005158 ORTHO05D005510 3.5e-26 122.5 194 39.7
FvH4_5g11940 Fragaria vesca HOM05D005158 ORTHO05D005510 4.5e-26 122.1 197 41.1
Peaxi162Scf00159g01112 Petunia axillaris HOM05D005158 ORTHO05D005510 5.9e-26 121.7 195 39.5
Carub.0002s1765 Capsella rubella HOM05D005158 ORTHO05D005510 7.7e-26 121.3 200 39.0
MSTRG.4576 Avicennia marina HOM05D005158 ORTHO05D005510 1.0e-25 120.9 333 32.1
Solyc05g017900.3 Solanum lycopersicum HOM05D005158 ORTHO05D005510 1.3e-25 120.6 201 39.3
Haze_10977 Corylus avellana HOM05D005158 ORTHO05D005510 2.2e-25 119.8 323 31.6
FAN18G4517 Fragaria x ananassa HOM05D005158 ORTHO05D005510 3.8e-25 119.0 205 39.5
SGA_v2.0_scaffold234G43623 Striga asiatica HOM05D005158 ORTHO05D005510 3.8e-25 119.0 197 39.6
FAN13G2578 Fragaria x ananassa HOM05D005158 ORTHO05D005510 6.5e-25 118.2 183 42.1
Cc11_g08400 Coffea canephora HOM05D005158 ORTHO05D005510 1.5e-24 117.1 196 38.3
HanXRQChr08g0212251 Helianthus annuus HOM05D005158 ORTHO05D005510 2.5e-24 116.3 196 39.3
FAN18G3280 Fragaria x ananassa HOM05D005158 ORTHO05D005510 4.2e-24 115.5 214 37.9
CSS0046275 Camellia sinensis var. sinensis HOM05D005158 ORTHO05D005510 5.5e-24 115.2 262 35.1
AUR62014187 Chenopodium quinoa HOM05D005158 ORTHO05D005510 5.5e-24 115.2 184 40.2
Cc11_g08410 Coffea canephora HOM05D005158 ORTHO05D005510 5.5e-24 115.2 196 37.8
Oeu046166.1 Olea europaea HOM05D005158 ORTHO05D005510 1.2e-23 114.0 329 30.7
Phvul.003G032200 Phaseolus vulgaris HOM05D005158 ORTHO05D005510 1.6e-23 113.6 193 39.4
FAN13G1699 Fragaria x ananassa HOM05D005158 ORTHO05D005510 2.7e-23 112.8 197 39.1
CAN.G236.18 Capsicum annuum HOM05D005158 ORTHO05D005510 3.6e-23 112.5 193 37.8
ATR0665G468 Amborella trichopoda HOM05D005158 ORTHO05D005510 6.1e-23 111.7 199 38.7
SalBow8G1650 Salvia bowleyana HOM05D005158 ORTHO05D005510 6.1e-23 111.7 186 38.2
SalBow8G5629 Salvia bowleyana HOM05D005158 ORTHO05D005510 6.1e-23 111.7 186 38.2
ECA233G1067 Erigeron canadensis HOM05D005158 ORTHO05D005510 8.0e-23 111.3 191 39.8
Lalb_Chr17g0338591 Lupinus albus HOM05D005158 ORTHO05D005510 1.0e-22 110.9 196 37.2
Ah.02g127790 Amaranthus hybridus HOM05D005158 ORTHO05D005510 1.4e-22 110.5 196 38.8
FAN08G3331 Fragaria x ananassa HOM05D005158 ORTHO05D005510 1.4e-22 110.5 197 39.1
Migut.D01553 Erythranthe guttata HOM05D005158 ORTHO05D005510 2.3e-22 109.8 196 39.3
MSTRG.13599 Avicennia marina HOM05D005158 ORTHO05D005510 3.0e-22 109.4 184 39.1
CDE05G1850 Ceratophyllum demersum HOM05D005158 ORTHO05D005510 4.0e-22 109.0 196 38.3
Lj2g0016958 Lotus japonicus HOM05D005158 ORTHO05D005510 4.0e-22 109.0 193 39.9
MELO3C014995.2 Cucumis melo HOM05D005158 ORTHO05D005510 5.2e-22 108.6 193 36.8
ClCG07G007220 Citrullus lanatus HOM05D005158 ORTHO05D005510 8.8e-22 107.8 193 37.3
CsaV3_5G015040 Cucumis sativus L. HOM05D005158 ORTHO05D005510 1.2e-21 107.5 193 36.8
Os03g0707200 Oryza sativa ssp. japonica HOM05D005158 ORTHO05D005510 5.7e-21 105.1 198 37.4
Prupe.5G232900 Prunus persica HOM05D005158 ORTHO05D005510 5.7e-21 105.1 230 33.9
Migut.L00352 Erythranthe guttata HOM05D005158 ORTHO05D005510 9.7e-21 104.4 208 35.6
Sed0000270 Sechium edule HOM05D005158 ORTHO05D005510 1.7e-20 103.6 193 37.3
Lj6A744G51 Lonicera japonica HOM05D005158 ORTHO05D005510 6.3e-20 101.7 284 30.6
Hund20682 Selenicereus undatus HOM05D005158 ORTHO05D005510 8.2e-20 101.3 138 42.8
SalBow1G1317 Salvia bowleyana HOM05D005158 ORTHO05D005510 1.1e-19 100.9 178 41.0
HPP92_016306 Vanilla planifolia HOM05D005158 ORTHO05D005510 1.1e-19 100.9 154 44.2
HPP92_016287 Vanilla planifolia HOM05D005158 ORTHO05D005510 2.7e-18 96.3 183 37.7
AUR62039517 Chenopodium quinoa HOM05D005158 ORTHO05D005510 3.5e-18 95.9 224 33.9
Thecc.02G284700 Theobroma cacao HOM05D005158 ORTHO05D005510 5.5e-16 88.6 93 47.3
FAN22G1395 Fragaria x ananassa HOM05D005158 ORTHO05D005510 9.4e-16 87.8 333 28.2
VMungo1215G0718 Vigna mungo HOM05D005158 ORTHO05D005510 1.6e-15 87.0 253 29.6
SEGI_17459 Sequoiadendron giganteum HOM05D005158 ORTHO05D005510 3.0e-14 82.8 116 42.2
Duzib068G0898 Durio zibethinus HOM05D005158 ORTHO05D005510 4.4e-13 79.0 104 48.1
Zm00001eb054470 Zea mays HOM05D005158 ORTHO05D005510 3.1e-11 72.8 72 51.4
Potri.008G130950 Populus trichocarpa HOM05D005158 ORTHO05D005510 4.5e-10 68.9 173 34.7
Zm00001eb280420 Zea mays HOM05D005158 ORTHO05D005510 6.5e-09 65.1 69 50.7
Oeu014055.2 Olea europaea HOM05D005158 ORTHO05D005510 8.6e-09 64.7 54 57.4
Cpa.g.sc570.2 Carica papaya HOM05D005158 ORTHO05D005510 2.5e-08 63.2 156 34.6
Manes.09G075257 Manihot esculenta HOM05D005158 ORTHO05D005510 4.2e-08 62.4 82 50.0
Dinv14415 Davidia involucrata HOM05D005158 ORTHO05D005510 9.5e-08 61.2 253 28.9
AagrBONN_evm.TU.Sc2ySwM_344.3657 Anthoceros agrestis HOM05D005158 ORTHO05D005510 4.7e-07 58.9 177 28.2
Oeu003374.1 Olea europaea HOM05D005158 ORTHO05D005510 8.0e-07 58.2 87 37.9
FAN07G0555 Fragaria x ananassa HOM05D005158 ORTHO05D005510 5.2e-06 55.5 87 41.4


User provided reference genes

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