Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGR044G0912 Punica granatum HOM05D007388 ORTHO05D009421 1.2e-118 429.9 222 100.0
Gohir.A05G039100 Gossypium hirsutum HOM05D007388 ORTHO05D009421 4.4e-68 261.9 225 62.2
Eucgr.C03150 Eucalyptus grandis HOM05D007388 ORTHO05D009421 1.7e-67 260.0 193 71.0
COL.COLO4_21128 Corchorus olitorius HOM05D007388 ORTHO05D009421 3.7e-67 258.8 226 64.6
Gohir.D05G040600 Gossypium hirsutum HOM05D007388 ORTHO05D009421 3.7e-67 258.8 225 61.8
TAR383G1008 Trochodendron aralioides HOM05D007388 ORTHO05D009421 1.8e-66 256.5 224 63.8
Nn8g38703 Nelumbo nucifera HOM05D007388 ORTHO05D009421 3.1e-66 255.8 227 63.9
Atru.chr7.1857 Acer truncatum HOM05D007388 ORTHO05D009421 1.2e-65 253.8 224 62.9
Duzib168G1804 Durio zibethinus HOM05D007388 ORTHO05D009421 4.2e-63 245.4 227 61.7
Ciclev10009451m.g Citrus clementina HOM05D007388 ORTHO05D009421 5.5e-63 245.0 222 59.9
Manes.16G084900 Manihot esculenta HOM05D007388 ORTHO05D009421 1.0e-61 240.7 225 60.9
QL02p016663 Quercus lobata HOM05D007388 ORTHO05D009421 1.0e-61 240.7 224 61.2
TWI63G1062 Tripterygium wilfordii HOM05D007388 ORTHO05D009421 3.0e-61 239.2 223 59.2
CsaV3_4G036020 Cucumis sativus L. HOM05D007388 ORTHO05D009421 2.6e-60 236.1 206 63.1
Lalb_Chr11g0063321 Lupinus albus HOM05D007388 ORTHO05D009421 2.6e-60 236.1 223 61.9
Cfa018015 Carpinus fangiana HOM05D007388 ORTHO05D009421 3.4e-60 235.7 225 59.6
MELO3C016910.2 Cucumis melo HOM05D007388 ORTHO05D009421 3.4e-60 235.7 173 70.5
Sed0027665 Sechium edule HOM05D007388 ORTHO05D009421 4.4e-60 235.3 204 60.3
MD15G1051600 Malus domestica HOM05D007388 ORTHO05D009421 5.7e-60 235.0 229 59.8
Nitab4.5_0001705g0020 Nicotiana tabacum HOM05D007388 ORTHO05D009421 7.5e-60 234.6 175 67.4
GSVIVG01035454001 Vitis vinifera HOM05D007388 ORTHO05D009421 1.3e-59 233.8 227 59.0
Dinv41838 Davidia involucrata HOM05D007388 ORTHO05D009421 1.7e-59 233.4 187 63.1
Medtr3g104980 Medicago truncatula HOM05D007388 ORTHO05D009421 2.2e-59 233.0 193 60.6
RcHm_v2.0_Chr6g0311651 Rosa chinensis HOM05D007388 ORTHO05D009421 1.1e-58 230.7 226 58.8
Potri.006G221900 Populus trichocarpa HOM05D007388 ORTHO05D009421 1.8e-58 229.9 226 57.1
Peaxi162Scf00596g00105 Petunia axillaris HOM05D007388 ORTHO05D009421 2.4e-58 229.6 205 60.0
ECA240G1505 Erigeron canadensis HOM05D007388 ORTHO05D009421 3.1e-58 229.2 196 60.7
MSTRG.25983 Avicennia marina HOM05D007388 ORTHO05D009421 4.1e-58 228.8 177 65.5
TPR.G3529 Trifolium pratense HOM05D007388 ORTHO05D009421 5.4e-58 228.4 186 61.8
THA.LOC104799581 Tarenaya hassleriana HOM05D007388 ORTHO05D009421 9.2e-58 227.6 174 64.4
Psat5g102720 Pisum sativum HOM05D007388 ORTHO05D009421 1.6e-57 226.9 185 61.1
ClCG05G015710 Citrullus lanatus HOM05D007388 ORTHO05D009421 2.0e-57 226.5 226 57.5
Migut.A00083 Erythranthe guttata HOM05D007388 ORTHO05D009421 3.5e-57 225.7 225 56.0
FvH4_2g31130 Fragaria vesca HOM05D007388 ORTHO05D009421 4.5e-57 225.3 191 63.4
CSS0004113 Camellia sinensis var. sinensis HOM05D007388 ORTHO05D009421 7.7e-57 224.6 175 62.3
ATR0598G070 Amborella trichopoda HOM05D007388 ORTHO05D009421 1.0e-56 224.2 144 73.6
Lj1g0010451 Lotus japonicus HOM05D007388 ORTHO05D009421 1.0e-56 224.2 220 55.9
Thecc.09G062100 Theobroma cacao HOM05D007388 ORTHO05D009421 1.3e-56 223.8 227 59.0
Glyma.04G055400 Glycine max HOM05D007388 ORTHO05D009421 2.9e-56 222.6 224 58.0
FAN20G0472 Fragaria x ananassa HOM05D007388 ORTHO05D009421 6.6e-56 221.5 195 61.5
Glyma.06G055600 Glycine max HOM05D007388 ORTHO05D009421 1.1e-55 220.7 188 63.3
Sabra06G0171500 Salix brachista HOM05D007388 ORTHO05D009421 1.1e-55 220.7 226 56.6
AUR62009088 Chenopodium quinoa HOM05D007388 ORTHO05D009421 1.5e-55 220.3 162 68.5
FAN24G3326 Fragaria x ananassa HOM05D007388 ORTHO05D009421 1.9e-55 219.9 191 62.3
BcaB08g36472 Brassica carinata HOM05D007388 ORTHO05D009421 2.5e-55 219.5 172 64.5
Phvul.009G081500 Phaseolus vulgaris HOM05D007388 ORTHO05D009421 3.3e-55 219.2 186 62.9
A10p18840 Brassica napus HOM05D007388 ORTHO05D009421 4.3e-55 218.8 174 63.8
AUR62020582 Chenopodium quinoa HOM05D007388 ORTHO05D009421 9.5e-55 217.6 162 67.3
Thhalv10014636m.g Eutrema salsugineum HOM05D007388 ORTHO05D009421 9.5e-55 217.6 174 64.4
BraA10t43964Z Brassica rapa HOM05D007388 ORTHO05D009421 1.6e-54 216.9 174 63.8
CiPaw.16G070200 Carya illinoinensis HOM05D007388 ORTHO05D009421 1.6e-54 216.9 227 57.3
AL6G32850 Arabidopsis lyrata HOM05D007388 ORTHO05D009421 2.1e-54 216.5 174 63.8
BcaC04g19512 Brassica carinata HOM05D007388 ORTHO05D009421 2.8e-54 216.1 174 63.8
C09p54850 Brassica napus HOM05D007388 ORTHO05D009421 2.8e-54 216.1 174 63.8
BolC9t58346H Brassica oleracea HOM05D007388 ORTHO05D009421 2.8e-54 216.1 174 63.8
MBI19_g11844_MAGBIO Magnolia biondii HOM05D007388 ORTHO05D009421 8.0e-54 214.5 175 62.9
AT5G21430 Arabidopsis thaliana HOM05D007388 ORTHO05D009421 1.0e-53 214.2 216 54.6
CARHR191660 Cardamine hirsuta HOM05D007388 ORTHO05D009421 1.4e-53 213.8 175 64.0
HanXRQChr04g0097861 Helianthus annuus HOM05D007388 ORTHO05D009421 1.4e-53 213.8 216 57.4
Carub.0006s1952 Capsella rubella HOM05D007388 ORTHO05D009421 1.8e-53 213.4 216 54.6
Aa31LG1G13520 Aethionema arabicum HOM05D007388 ORTHO05D009421 3.0e-53 212.6 191 59.7
Actinidia25694 Actinidia chinensis HOM05D007388 ORTHO05D009421 4.0e-53 212.2 158 67.1
CAN.G246.5 Capsicum annuum HOM05D007388 ORTHO05D009421 5.2e-53 211.8 172 63.4
Sopen06g034360 Solanum pennellii HOM05D007388 ORTHO05D009421 6.8e-53 211.5 169 65.7
PGSC0003DMG400027673 Solanum tuberosum HOM05D007388 ORTHO05D009421 6.8e-53 211.5 200 58.5
Solyc06g082970.3 Solanum lycopersicum HOM05D007388 ORTHO05D009421 8.9e-53 211.1 169 65.1
FAN27G0155 Fragaria x ananassa HOM05D007388 ORTHO05D009421 2.0e-52 209.9 199 57.3
Sp6g23310 Schrenkiella parvula HOM05D007388 ORTHO05D009421 7.5e-52 208.0 174 60.3
Gorai.009G041100 Gossypium raimondii HOM05D007388 ORTHO05D009421 9.8e-52 207.6 195 57.9
Atru.BG.20.p Acer truncatum HOM05D007388 ORTHO05D009421 1.8e-50 203.4 128 75.0
VMungo1309G3057 Vigna mungo HOM05D007388 ORTHO05D009421 1.8e-50 203.4 225 55.1
Oeu000765.1 Olea europaea HOM05D007388 ORTHO05D009421 5.4e-50 201.8 304 42.1
CDE06G1148 Ceratophyllum demersum HOM05D007388 ORTHO05D009421 1.2e-49 200.7 208 53.4
CANSAT25G2576 Cannabis sativa HOM05D007388 ORTHO05D009421 1.6e-49 200.3 154 64.9
PSO421G0687 Papaver somniferum HOM05D007388 ORTHO05D009421 1.0e-48 197.6 155 64.5
DCAR_003716 Daucus carota HOM05D007388 ORTHO05D009421 3.9e-48 195.7 231 48.5
arahy.Tifrunner.gnm1.ann1.P6UV73 Arachis hypogaea HOM05D007388 ORTHO05D009421 5.0e-48 195.3 230 52.6
EL10Ac2g03792 Beta vulgaris HOM05D007388 ORTHO05D009421 3.3e-47 192.6 128 73.4
Cc08_g01260 Coffea canephora HOM05D007388 ORTHO05D009421 2.8e-46 189.5 154 65.6
Lsat_1_v5_gn_7_58400 Lactuca sativa HOM05D007388 ORTHO05D009421 2.8e-46 189.5 161 63.4
arahy.Tifrunner.gnm1.ann1.044LWD Arachis hypogaea HOM05D000560 ORTHO05D000417 1.4e-45 187.2 230 51.3
Os12g0498500 Oryza sativa ssp. japonica HOM05D007388 ORTHO05D009421 1.5e-44 183.7 172 56.4
Zm00001eb409580 Zea mays HOM05D007388 ORTHO05D009421 1.5e-44 183.7 172 57.0
Rhsim10G0152000 Rhododendron simsii HOM05D007388 ORTHO05D009421 4.4e-44 182.2 147 58.5
Nitab4.5_0000268g0090 Nicotiana tabacum HOM05D007388 ORTHO05D009421 1.4e-42 177.2 227 47.6
CDE07G0202 Ceratophyllum demersum HOM05D007388 ORTHO05D001048 1.9e-42 176.8 159 57.9
Aqoxy7G01075 Aquilegia oxysepala HOM05D007388 ORTHO05D009421 2.7e-41 172.9 194 55.2
Lj7C227T7 Lonicera japonica HOM05D007388 ORTHO05D009421 4.6e-41 172.2 188 52.1
Prupe.1G405600 Prunus persica HOM05D007388 ORTHO05D009421 4.6e-41 172.2 192 53.6
Ca_15836_v3 Cicer arietinum L. HOM05D007388 ORTHO05D009421 1.0e-40 171.0 197 50.3
vmacro12914 Vaccinium macrocarpon HOM05D007388 ORTHO05D009421 4.0e-37 159.1 153 54.2
Lj7C225T7 Lonicera japonica HOM05D007388 ORTHO05D009421 3.4e-36 156.0 188 49.5
AagrBONN_evm.TU.Sc2ySwM_368.3296 Anthoceros agrestis HOM05D007388 ORTHO05D009421 3.3e-23 112.8 164 42.1
Pp3c12_9640 Physcomitrium patens HOM05D007388 ORTHO05D009421 8.9e-21 104.8 174 42.0
Pp3c4_14700 Physcomitrium patens HOM05D007388 ORTHO05D009421 3.4e-20 102.8 176 39.8
unitig_4.g30329 Utricularia gibba HOM05D007388 ORTHO05D009421 4.4e-20 102.4 195 40.5
Hma1.2p1_0231F.1_g097390 Hydrangea macrophylla HOM05D007388 ORTHO05D009421 2.2e-19 100.1 99 52.5
Mapoly0129s0003 Marchantia polymorpha HOM05D007388 ORTHO05D009421 1.9e-15 87.0 179 35.2
BNapus_Darmor_BZH_scaffold_38p01020 Brassica napus HOM05D007388 ORTHO05D009421 2.0e-12 77.0 66 57.6
Haze_18114 Corylus avellana HOM05D007388 ORTHO05D009421 1.1e-07 61.2 103 45.6
SMO223G0044 Selaginella moellendorffii HOM05D007480 ORTHO05D009460 4.8e-06 55.8 97 35.1


User provided reference genes

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