Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGR044G0888 Punica granatum HOM05D002652 ORTHO05D002739 4.7e-143 511.1 250 100.0
Eucgr.F02935 Eucalyptus grandis HOM05D002652 ORTHO05D002739 1.7e-39 167.2 250 40.0
Eucgr.F02936 Eucalyptus grandis HOM05D002652 ORTHO05D002739 1.2e-13 81.3 190 34.2
COL.COLO4_15898 Corchorus olitorius HOM05D002652 ORTHO05D002739 2.7e-13 80.1 154 38.3
TAR174G0001 Trochodendron aralioides HOM05D002652 ORTHO05D002739 1.7e-12 77.4 153 29.4
Cpa.g.sc59.9 Carica papaya HOM05D002652 ORTHO05D002739 2.3e-12 77.0 154 33.1
TAR365G0384 Trochodendron aralioides HOM05D002652 ORTHO05D002739 2.3e-12 77.0 153 33.3
Atru.chr4.1903 Acer truncatum HOM05D002652 ORTHO05D002739 6.5e-12 75.5 152 31.6
DCAR_002582 Daucus carota HOM05D002652 ORTHO05D002739 1.9e-11 73.9 157 29.3
Nn1g00661 Nelumbo nucifera HOM05D002652 ORTHO05D002739 9.5e-11 71.6 153 32.7
COL.COLO4_15901 Corchorus olitorius HOM05D002652 ORTHO05D002739 1.2e-10 71.2 153 34.0
Cpa.g.sc8968.1 Carica papaya HOM05D002652 ORTHO05D002739 1.6e-10 70.9 151 31.8
Cfa021216 Carpinus fangiana HOM05D002652 ORTHO05D002739 1.6e-10 70.9 113 33.6
Potri.T121000 Populus trichocarpa HOM05D002652 ORTHO05D002739 1.6e-10 70.9 165 29.1
Nn1g08811 Nelumbo nucifera HOM05D002652 ORTHO05D002739 2.1e-10 70.5 152 30.9
TAR636G3443 Trochodendron aralioides HOM05D002652 ORTHO05D002739 2.1e-10 70.5 188 29.3
Haze_25448 Corylus avellana HOM05D002652 ORTHO05D002739 4.7e-10 69.3 152 30.3
FvH4_4g04980 Fragaria vesca HOM05D002652 ORTHO05D002739 4.7e-10 69.3 158 30.4
Sabra19G0035100 Salix brachista HOM05D002652 ORTHO05D002739 8.0e-10 68.6 154 29.9
Sabra19G0035500 Salix brachista HOM05D002652 ORTHO05D002739 8.0e-10 68.6 154 29.9
Prupe.1G050000 Prunus persica HOM05D002652 ORTHO05D002739 3.0e-09 66.6 160 31.2
COL.COLO4_15907 Corchorus olitorius HOM05D002652 ORTHO05D002739 5.2e-09 65.9 153 32.7
CiPaw.08G106800 Carya illinoinensis HOM05D002652 ORTHO05D002739 6.8e-09 65.5 154 27.3
CARHR219080 Cardamine hirsuta HOM05D002652 ORTHO05D002739 8.8e-09 65.1 154 32.5
Duzib151G0998 Durio zibethinus HOM05D002652 ORTHO05D002739 8.8e-09 65.1 203 28.6
Rhsim02G0047200 Rhododendron simsii HOM05D002652 ORTHO05D002739 8.8e-09 65.1 156 30.1
Nn1g00657 Nelumbo nucifera HOM05D002652 ORTHO05D002739 1.2e-08 64.7 153 30.7
Haze_11422 Corylus avellana HOM05D001324 ORTHO05D001220 2.0e-08 63.9 157 30.6
Duzib147G0896 Durio zibethinus HOM05D002652 ORTHO05D002739 2.6e-08 63.5 155 27.7
Ciclev10005927m.g Citrus clementina HOM05D002652 ORTHO05D002739 3.4e-08 63.2 156 28.8
Manes.03G158000 Manihot esculenta HOM05D002652 ORTHO05D002739 3.4e-08 63.2 177 28.2
Aa31LG9G4200 Aethionema arabicum HOM05D002652 ORTHO05D002739 5.7e-08 62.4 158 31.0
CDE06G2142 Ceratophyllum demersum HOM05D040691 ORTHO05D002739 7.5e-08 62.0 167 28.7
TAR636G2313 Trochodendron aralioides HOM05D002652 ORTHO05D002739 7.5e-08 62.0 149 29.5
CiPaw.02G106100 Carya illinoinensis HOM05D002652 ORTHO05D002739 1.7e-07 60.8 94 35.1
FvH4_4g04990 Fragaria vesca HOM05D002652 ORTHO05D002739 2.2e-07 60.5 155 28.4
Nn2g14922 Nelumbo nucifera HOM05D002652 ORTHO05D002739 2.8e-07 60.1 151 28.5
Actinidia39934 Actinidia chinensis HOM05D002652 ORTHO05D002739 4.9e-07 59.3 193 25.9
CDE03G0509 Ceratophyllum demersum HOM05D040691 ORTHO05D002739 6.3e-07 58.9 167 28.1
FAN16G2437 Fragaria x ananassa HOM05D002652 ORTHO05D002739 6.3e-07 58.9 160 26.9
FAN21G1568 Fragaria x ananassa HOM05D002652 ORTHO05D002739 6.3e-07 58.9 160 26.9
CDE06G1987 Ceratophyllum demersum HOM05D038143 ORTHO05D002739 8.3e-07 58.5 90 32.2
FvH4_3g15000 Fragaria vesca HOM05D002652 ORTHO05D002739 1.4e-06 57.8 160 26.9
FAN11G1518 Fragaria x ananassa HOM05D002652 ORTHO05D002739 1.4e-06 57.8 160 26.2
FAN22G0933 Fragaria x ananassa HOM05D004511 ORTHO05D005348 1.4e-06 57.8 158 27.2
RhsimUnG0058300 Rhododendron simsii HOM05D002652 ORTHO05D002739 1.4e-06 57.8 184 29.3
RcHm_v2.0_Chr4g0397571 Rosa chinensis HOM05D002652 ORTHO05D002739 2.4e-06 57.0 161 28.0
RcHm_v2.0_Chr4g0395551 Rosa chinensis HOM05D002652 ORTHO05D002739 7.0e-06 55.5 163 29.4
RcHm_v2.0_Chr4g0395751 Rosa chinensis HOM05D002652 ORTHO05D002739 7.0e-06 55.5 101 31.7
RcHm_v2.0_Chr5g0024631 Rosa chinensis HOM05D002652 ORTHO05D002739 7.0e-06 55.5 160 26.2


User provided reference genes

Program Settings