Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGR044G0794 Punica granatum HOM05D007441 ORTHO05D009501 2.9e-100 368.6 193 100.0
Atru.chr9.2436 Acer truncatum HOM05D007441 ORTHO05D009501 5.0e-52 208.4 175 65.1
FvH4_5g05090 Fragaria vesca HOM05D007441 ORTHO05D009501 1.1e-51 207.2 181 60.8
RcHm_v2.0_Chr7g0193911 Rosa chinensis HOM05D007441 ORTHO05D009501 1.1e-51 207.2 179 60.9
FAN13G3077 Fragaria x ananassa HOM05D007441 ORTHO05D009501 3.2e-51 205.7 180 59.4
FAN18G4363 Fragaria x ananassa HOM05D007441 ORTHO05D009501 4.2e-51 205.3 180 59.4
GSVIVG01007790001 Vitis vinifera HOM05D007441 ORTHO05D009501 5.5e-51 204.9 189 61.9
Prupe.5G176500 Prunus persica HOM05D007441 ORTHO05D009501 7.2e-51 204.5 183 58.5
FAN04G2715 Fragaria x ananassa HOM05D007441 ORTHO05D009501 1.6e-50 203.4 183 59.0
Hma1.2p1_0176F.1_g077710 Hydrangea macrophylla HOM05D007441 ORTHO05D009501 4.0e-49 198.7 157 65.6
QL10p013655 Quercus lobata HOM05D007441 ORTHO05D009501 4.0e-49 198.7 181 58.0
Thecc.03G008500 Theobroma cacao HOM05D007441 ORTHO05D009501 4.0e-49 198.7 183 60.7
Ciclev10022460m.g Citrus clementina HOM05D007441 ORTHO05D009501 5.2e-49 198.4 187 60.4
MD14G1183800 Malus domestica HOM05D007441 ORTHO05D009501 6.8e-49 198.0 174 57.5
Duzib084G0400 Durio zibethinus HOM05D007441 ORTHO05D009501 2.0e-48 196.4 181 58.6
Glyma.17G091300 Glycine max HOM05D007441 ORTHO05D009501 2.0e-48 196.4 175 56.6
Manes.06G102900 Manihot esculenta HOM05D007441 ORTHO05D009501 9.7e-48 194.1 145 66.9
Sc04g0001930 Simmondsia chinensis HOM05D007441 ORTHO05D009501 1.7e-47 193.4 173 57.8
Actinidia19093 Actinidia chinensis HOM05D007441 ORTHO05D009501 2.2e-47 193.0 140 67.1
Duzib205G0170 Durio zibethinus HOM05D007441 ORTHO05D009501 3.7e-47 192.2 173 59.0
CSS0037538 Camellia sinensis var. sinensis HOM05D007441 ORTHO05D009501 1.8e-46 189.9 152 63.2
CiPaw.11G029400 Carya illinoinensis HOM05D007441 ORTHO05D009501 4.1e-46 188.7 165 60.0
VMungo1215G1307 Vigna mungo HOM05D007441 ORTHO05D009501 5.3e-46 188.3 172 57.0
Potri.012G078400 Populus trichocarpa HOM05D007441 ORTHO05D009501 3.5e-45 185.7 171 58.5
Lj4g0018861 Lotus japonicus HOM05D007441 ORTHO05D009501 1.3e-44 183.7 150 60.7
arahy.Tifrunner.gnm1.ann1.DR4P4T Arachis hypogaea HOM05D007441 ORTHO05D009501 3.8e-44 182.2 156 57.1
Phvul.003G198700 Phaseolus vulgaris HOM05D007441 ORTHO05D009501 3.8e-44 182.2 150 59.3
TWI15G0162 Tripterygium wilfordii HOM05D007441 ORTHO05D009501 6.5e-44 181.4 185 56.2
TAR622G1175 Trochodendron aralioides HOM05D007441 ORTHO05D009501 6.5e-44 181.4 144 63.9
arahy.Tifrunner.gnm1.ann1.01HJP6 Arachis hypogaea HOM05D007441 ORTHO05D009501 1.1e-43 180.6 156 56.4
Sabra12G0056200 Salix brachista HOM05D007441 ORTHO05D009501 1.1e-43 180.6 148 62.2
A09p38770 Brassica napus HOM05D007441 ORTHO05D009501 1.5e-43 180.3 152 61.8
BraA09t39385Z Brassica rapa HOM05D007441 ORTHO05D009501 1.5e-43 180.3 152 61.8
Lsat_1_v5_gn_1_26521 Lactuca sativa HOM05D007441 ORTHO05D009501 2.5e-43 179.5 145 61.4
Lj9A451T94 Lonicera japonica HOM05D007441 ORTHO05D009501 3.2e-43 179.1 179 52.5
Dinv20676 Davidia involucrata HOM05D007441 ORTHO05D009501 5.5e-43 178.3 148 64.2
THA.LOC104809273 Tarenaya hassleriana HOM05D007441 ORTHO05D009501 5.5e-43 178.3 181 56.9
BcaC05g26717 Brassica carinata HOM05D007441 ORTHO05D009501 7.2e-43 177.9 189 55.6
C05p25830 Brassica napus HOM05D007441 ORTHO05D009501 7.2e-43 177.9 175 57.7
ECA247G2439 Erigeron canadensis HOM05D007441 ORTHO05D009501 9.4e-43 177.6 144 61.1
Lalb_Chr07g0182651 Lupinus albus HOM05D007441 ORTHO05D009501 1.2e-42 177.2 145 60.7
SGA_v2.0_scaffold90G27976 Striga asiatica HOM05D007441 ORTHO05D009501 1.2e-42 177.2 176 54.5
Oeu016356.1 Olea europaea HOM05D007441 ORTHO05D009501 1.6e-42 176.8 179 54.7
Potri.015G073900 Populus trichocarpa HOM05D007441 ORTHO05D009501 2.1e-42 176.4 171 58.5
AUR62030992 Chenopodium quinoa HOM05D007441 ORTHO05D009501 4.7e-42 175.3 182 54.4
Nitab4.5_0006831g0010 Nicotiana tabacum HOM05D007441 ORTHO05D009501 8.0e-42 174.5 144 62.5
BolC5t31303H Brassica oleracea HOM05D007441 ORTHO05D009501 1.4e-41 173.7 184 56.0
CANSAT80G2614 Cannabis sativa HOM05D007441 ORTHO05D009501 1.8e-41 173.3 145 60.7
AUR62008240 Chenopodium quinoa HOM05D007441 ORTHO05D009501 1.8e-41 173.3 182 53.3
AT1G24450 Arabidopsis thaliana HOM05D007441 ORTHO05D009501 2.3e-41 172.9 175 57.1
SalBow5G3166 Salvia bowleyana HOM05D007441 ORTHO05D009501 3.0e-41 172.6 142 59.2
AL1G40490 Arabidopsis lyrata HOM05D007441 ORTHO05D009501 5.2e-41 171.8 172 55.8
HanXRQChr02g0037211 Helianthus annuus HOM05D007441 ORTHO05D009501 1.2e-40 170.6 173 52.0
Sp1g23350 Schrenkiella parvula HOM05D007441 ORTHO05D009501 1.2e-40 170.6 177 54.2
Carub.0001s2566 Capsella rubella HOM05D007441 ORTHO05D009501 3.4e-40 169.1 172 57.0
Cpa.g.sc124.33 Carica papaya HOM05D007441 ORTHO05D009501 3.4e-40 169.1 184 51.6
Ca_21905_v3 Cicer arietinum L. HOM05D007441 ORTHO05D009501 3.4e-40 169.1 141 59.6
Ca_21923_v3 Cicer arietinum L. HOM05D007441 ORTHO05D009501 3.4e-40 169.1 141 59.6
Medtr4g106640 Medicago truncatula HOM05D007441 ORTHO05D009501 5.7e-40 168.3 141 58.2
Nn4g22840 Nelumbo nucifera HOM05D007441 ORTHO05D009501 5.7e-40 168.3 174 51.1
Aqoxy3G03040 Aquilegia oxysepala HOM05D007441 ORTHO05D009501 9.8e-40 167.5 149 57.7
Hund02733 Selenicereus undatus HOM05D007441 ORTHO05D009501 9.8e-40 167.5 176 55.1
Nitab4.5_0010542g0040 Nicotiana tabacum HOM05D007441 ORTHO05D001268 2.8e-39 166.0 134 63.4
Psat4g057000 Pisum sativum HOM05D007441 ORTHO05D009501 2.8e-39 166.0 141 57.4
CARHR026680 Cardamine hirsuta HOM05D007441 ORTHO05D009501 6.3e-39 164.9 182 52.2
Rhsim12G0163200 Rhododendron simsii HOM05D007441 ORTHO05D009501 6.3e-39 164.9 137 55.5
PGSC0003DMG400024487 Solanum tuberosum HOM05D007441 ORTHO05D009501 6.3e-39 164.9 174 52.3
Solyc03g114120.3 Solanum lycopersicum HOM05D007441 ORTHO05D009501 1.1e-38 164.1 174 52.3
Sopen03g033180 Solanum pennellii HOM05D007441 ORTHO05D009501 1.1e-38 164.1 174 52.3
Haze_07488 Corylus avellana HOM05D007441 ORTHO05D009501 2.4e-38 162.9 171 56.1
Aa31LG7G9580 Aethionema arabicum HOM05D007441 ORTHO05D009501 5.4e-38 161.8 179 54.2
TPR.G37479 Trifolium pratense HOM05D007441 ORTHO05D009501 5.4e-38 161.8 145 55.2
Thhalv10008862m.g Eutrema salsugineum HOM05D007441 ORTHO05D009501 7.0e-38 161.4 172 53.5
MSTRG.23109 Avicennia marina HOM05D007441 ORTHO05D009501 9.1e-38 161.0 152 54.6
EL10Ac5g10787 Beta vulgaris HOM05D007441 ORTHO05D009501 2.7e-37 159.5 167 52.1
CAN.G4872.1 Capsicum annuum HOM05D007441 ORTHO05D009501 1.3e-36 157.1 127 63.8
BcaC05g26720 Brassica carinata HOM05D007441 ORTHO05D009501 2.9e-36 156.0 184 53.3
PSO832G4588 Papaver somniferum HOM05D007441 ORTHO05D009501 1.5e-35 153.7 168 47.0
DCAR_031307 Daucus carota HOM05D007441 ORTHO05D009501 2.1e-34 149.8 117 59.8
CAN.G781.35 Capsicum annuum HOM05D007441 ORTHO05D009501 1.4e-33 147.1 128 58.6
AUR62029952 Chenopodium quinoa HOM05D007441 ORTHO05D009501 8.9e-33 144.4 124 59.7
BcaC05g26525 Brassica carinata HOM05D007441 ORTHO05D009501 1.3e-31 140.6 121 59.5
BcaC06g35265 Brassica carinata HOM05D007441 ORTHO05D009501 2.4e-30 136.3 109 62.4
C07p18070 Brassica napus HOM05D007441 ORTHO05D009501 1.2e-29 134.0 109 61.5
Peaxi162Scf00017g00269 Petunia axillaris HOM05D007441 ORTHO05D009501 4.6e-29 132.1 116 57.8
ATR1149G031 Amborella trichopoda HOM05D007441 ORTHO05D009501 1.3e-28 130.6 151 45.7
Dinv09163 Davidia involucrata HOM05D007441 ORTHO05D009501 1.9e-27 126.7 95 67.4
MBI15_g31106_MAGBIO Magnolia biondii HOM05D007441 ORTHO05D009501 4.3e-27 125.6 111 55.9
Zm00001eb210540 Zea mays HOM05D007441 ORTHO05D009501 8.0e-26 121.3 141 41.1
BolC7t42316H Brassica oleracea HOM05D007441 ORTHO05D009501 2.2e-23 113.2 104 54.8
AUR62039786 Chenopodium quinoa HOM05D007441 ORTHO05D009501 3.7e-23 112.5 119 52.9
Actinidia34944 Actinidia chinensis HOM05D007441 ORTHO05D009501 2.7e-21 106.3 84 57.1
Medtr4g079220 Medicago truncatula HOM05D007441 ORTHO05D009501 4.7e-18 95.5 71 66.2
Os03g0854400 Oryza sativa ssp. japonica HOM05D007441 ORTHO05D009501 5.2e-17 92.0 151 35.8
AUR62040474 Chenopodium quinoa HOM05D007441 ORTHO05D009501 1.5e-16 90.5 124 44.4
COL.COLO4_16923 Corchorus olitorius HOM05D007441 ORTHO05D009501 2.0e-16 90.1 90 51.1
CAN.G781.34 Capsicum annuum HOM05D007441 ORTHO05D009501 2.6e-16 89.7 80 57.5
SMO118G0028 Selaginella moellendorffii HOM05D007441 ORTHO05D009501 1.2e-13 80.9 123 39.0
Migut.I00040 Erythranthe guttata HOM05D007441 ORTHO05D009501 4.6e-13 79.0 61 57.4
SEGI_24388 Sequoiadendron giganteum HOM05D007441 ORTHO05D009501 1.7e-12 77.0 109 42.2
HPP92_004711 Vanilla planifolia HOM05D007441 ORTHO05D009501 4.0e-09 65.9 96 38.5


User provided reference genes

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