Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGR044G0767 Punica granatum HOM05D007078 ORTHO05D008745 5.2e-115 417.9 244 100.0
Eucgr.K03409 Eucalyptus grandis HOM05D007078 ORTHO05D008745 6.1e-79 298.1 242 66.9
Dinv11266 Davidia involucrata HOM05D007078 ORTHO05D008745 2.0e-74 283.1 237 63.7
CiPaw.07G095800 Carya illinoinensis HOM05D007078 ORTHO05D008745 2.2e-73 279.6 145 91.7
Cfa006079 Carpinus fangiana HOM05D007078 ORTHO05D008745 3.8e-73 278.9 145 89.7
QL12p022959 Quercus lobata HOM05D007078 ORTHO05D008745 3.8e-73 278.9 232 63.4
TWI59G1055 Tripterygium wilfordii HOM05D007078 ORTHO05D008745 5.0e-73 278.5 143 91.6
Ciclev10022169m.g Citrus clementina HOM05D007078 ORTHO05D008745 8.5e-73 277.7 217 68.7
Potri.014G137300 Populus trichocarpa HOM05D007078 ORTHO05D008745 8.5e-73 277.7 144 90.3
Manes.05G071800 Manihot esculenta HOM05D007078 ORTHO05D008745 1.9e-72 276.6 144 91.7
arahy.Tifrunner.gnm1.ann1.9GKU3H Arachis hypogaea HOM05D007078 ORTHO05D008745 3.2e-72 275.8 146 88.4
arahy.Tifrunner.gnm1.ann1.ERKA9X Arachis hypogaea HOM05D007078 ORTHO05D008745 3.2e-72 275.8 146 88.4
Duzib138G1888 Durio zibethinus HOM05D007078 ORTHO05D008745 3.2e-72 275.8 145 90.3
PGR142G0265 Punica granatum HOM05D007078 ORTHO05D008745 7.2e-72 274.6 147 91.8
Cpa.g.sc9.128 Carica papaya HOM05D007078 ORTHO05D008745 9.4e-72 274.2 145 89.0
CSS0036917 Camellia sinensis var. sinensis HOM05D007078 ORTHO05D008745 1.6e-71 273.5 142 90.8
CsaV3_7G028490 Cucumis sativus L. HOM05D007078 ORTHO05D008745 2.1e-71 273.1 143 90.9
Nn3g21178 Nelumbo nucifera HOM05D007078 ORTHO05D008745 2.1e-71 273.1 144 87.5
CSS0044942 Camellia sinensis var. sinensis HOM05D007078 ORTHO05D008745 2.7e-71 272.7 142 90.8
Cc09_g03260 Coffea canephora HOM05D007078 ORTHO05D008745 2.7e-71 272.7 142 90.8
Gorai.004G084200 Gossypium raimondii HOM05D007078 ORTHO05D008745 4.7e-71 271.9 230 63.9
TAR362G1057 Trochodendron aralioides HOM05D007078 ORTHO05D008745 7.9e-71 271.2 145 86.9
MELO3C015872.2 Cucumis melo HOM05D007078 ORTHO05D008745 1.0e-70 270.8 143 90.2
Gohir.D08G078400 Gossypium hirsutum HOM05D007078 ORTHO05D008745 1.4e-70 270.4 230 63.5
Sed0016724 Sechium edule HOM05D007078 ORTHO05D008745 1.4e-70 270.4 145 88.3
GSVIVG01011060001 Vitis vinifera HOM05D007078 ORTHO05D008745 1.4e-70 270.4 209 67.0
ATR0626G125 Amborella trichopoda HOM05D007078 ORTHO05D008745 3.9e-70 268.9 147 84.4
CANSAT25G2561 Cannabis sativa HOM05D007078 ORTHO05D008745 3.9e-70 268.9 143 89.5
DCAR_018382 Daucus carota HOM05D007078 ORTHO05D008745 6.7e-70 268.1 146 87.0
VMungo1383G1152 Vigna mungo HOM05D007078 ORTHO05D008745 6.7e-70 268.1 146 85.6
Aqoxy5G00564 Aquilegia oxysepala HOM05D007078 ORTHO05D008745 1.5e-69 266.9 145 85.5
Hma1.2p1_0628F.1_g191760 Hydrangea macrophylla HOM05D007078 ORTHO05D008745 2.6e-69 266.2 143 86.0
Os05g0404400 Oryza sativa ssp. japonica HOM05D007078 ORTHO05D008745 3.3e-69 265.8 147 86.4
Lsat_1_v5_gn_9_1840 Lactuca sativa HOM05D007078 ORTHO05D008745 4.4e-69 265.4 143 88.1
Glyma.19G152600 Glycine max HOM05D007078 ORTHO05D008745 5.7e-69 265.0 223 62.8
Prupe.8G247900 Prunus persica HOM05D007078 ORTHO05D008745 5.7e-69 265.0 140 88.6
THA.LOC104823061 Tarenaya hassleriana HOM05D007078 ORTHO05D008745 5.7e-69 265.0 141 89.4
HanXRQChr15g0466581 Helianthus annuus HOM05D007078 ORTHO05D008745 9.7e-69 264.2 145 86.9
Phvul.001G147500 Phaseolus vulgaris HOM05D007078 ORTHO05D008745 1.7e-68 263.5 146 84.2
Lj1g0026447 Lotus japonicus HOM05D007078 ORTHO05D008745 2.2e-68 263.1 143 85.3
Nitab4.5_0005757g0030 Nicotiana tabacum HOM05D007078 ORTHO05D008745 2.2e-68 263.1 144 86.1
Haze_04771 Corylus avellana HOM05D007078 ORTHO05D008745 2.8e-68 262.7 238 61.3
FvH4_2g24170 Fragaria vesca HOM05D007078 ORTHO05D008745 3.7e-68 262.3 145 86.2
Sp4g29960 Schrenkiella parvula HOM05D007078 ORTHO05D008745 3.7e-68 262.3 145 86.2
Atru.chr5.1330 Acer truncatum HOM05D007078 ORTHO05D008745 4.8e-68 261.9 143 86.7
EL10Ac7g17029 Beta vulgaris HOM05D007078 ORTHO05D008745 4.8e-68 261.9 144 86.1
CDE12G0236 Ceratophyllum demersum HOM05D007078 ORTHO05D008745 4.8e-68 261.9 142 85.9
Migut.D00250 Erythranthe guttata HOM05D007078 ORTHO05D008745 4.8e-68 261.9 144 84.0
FAN27G0292 Fragaria x ananassa HOM05D007078 ORTHO05D008745 4.8e-68 261.9 145 86.2
RcHm_v2.0_Chr6g0291981 Rosa chinensis HOM05D007078 ORTHO05D008745 6.3e-68 261.5 145 85.5
vmacro02537 Vaccinium macrocarpon HOM05D007078 ORTHO05D008745 1.1e-67 260.8 215 62.8
ECA247G1342 Erigeron canadensis HOM05D007078 ORTHO05D008745 1.4e-67 260.4 143 85.3
Thhalv10001627m.g Eutrema salsugineum HOM05D007078 ORTHO05D008745 1.4e-67 260.4 145 85.5
unitig_0.g636 Utricularia gibba HOM05D007078 ORTHO05D008745 1.8e-67 260.0 136 91.9
MD03G1271700 Malus domestica HOM05D007078 ORTHO05D008745 2.4e-67 259.6 143 86.7
PSO210G6132 Papaver somniferum HOM05D007078 ORTHO05D008745 5.3e-67 258.5 146 81.5
AT2G48070 Arabidopsis thaliana HOM05D007078 ORTHO05D008745 7.0e-67 258.1 146 82.9
Ca_08555_v3 Cicer arietinum L. HOM05D007078 ORTHO05D008745 7.0e-67 258.1 143 81.8
CARHR143460 Cardamine hirsuta HOM05D007078 ORTHO05D008745 9.1e-67 257.7 144 83.3
Oeu047893.1 Olea europaea HOM05D007078 ORTHO05D008745 1.5e-66 256.9 136 89.0
PSO832G3632 Papaver somniferum HOM05D007078 ORTHO05D008745 1.5e-66 256.9 146 80.8
Nitab4.5_0001436g0040 Nicotiana tabacum HOM05D007078 ORTHO05D008745 2.0e-66 256.5 243 58.4
AL4G47660 Arabidopsis lyrata HOM05D007078 ORTHO05D008745 2.6e-66 256.1 145 83.4
Medtr7g094220 Medicago truncatula HOM05D007078 ORTHO05D008745 4.5e-66 255.4 143 82.5
Psat3g066400 Pisum sativum HOM05D007078 ORTHO05D008745 5.9e-66 255.0 143 81.8
BcaC02g12558 Brassica carinata HOM05D007078 ORTHO05D008745 1.0e-65 254.2 145 82.8
BolSC55t61232H Brassica oleracea HOM05D007078 ORTHO05D008745 1.0e-65 254.2 145 82.8
Rhsim13G0021200 Rhododendron simsii HOM05D005701 ORTHO05D007058 1.7e-65 253.4 134 88.8
Sc24g0004060 Simmondsia chinensis HOM05D007078 ORTHO05D008745 1.7e-65 253.4 135 89.6
BcaB02g08732 Brassica carinata HOM05D007078 ORTHO05D008745 2.2e-65 253.1 144 82.6
TPR.G32805 Trifolium pratense HOM05D007078 ORTHO05D008745 2.2e-65 253.1 143 81.8
Carub.0004s3077 Capsella rubella HOM05D007078 ORTHO05D008745 2.9e-65 252.7 145 82.8
Glyma.03G149600 Glycine max HOM05D007078 ORTHO05D008745 5.0e-65 251.9 215 67.0
FAN15G0223 Fragaria x ananassa HOM05D007078 ORTHO05D008745 6.5e-65 251.5 138 86.2
Solyc05g055850.3 Solanum lycopersicum HOM05D007078 ORTHO05D008745 6.5e-65 251.5 141 85.1
Sopen05g034250 Solanum pennellii HOM05D007078 ORTHO05D008745 1.4e-64 250.4 138 86.2
Thecc.01G285900 Theobroma cacao HOM05D007078 ORTHO05D008745 2.5e-64 249.6 132 90.2
A05p00060 Brassica napus HOM05D007078 ORTHO05D008745 5.5e-64 248.4 145 82.1
BraA05t19002Z Brassica rapa HOM05D007078 ORTHO05D008745 5.5e-64 248.4 145 82.1
MD11G1292300 Malus domestica HOM05D007078 ORTHO05D008745 5.5e-64 248.4 143 84.6
PGSC0003DMG400023469 Solanum tuberosum HOM05D007078 ORTHO05D008745 3.6e-63 245.7 241 56.8
AUR62006322 Chenopodium quinoa HOM05D007078 ORTHO05D008745 4.7e-63 245.4 137 84.7
Lj1C43T3 Lonicera japonica HOM05D007078 ORTHO05D008745 2.3e-62 243.0 207 61.4
Lalb_Chr01g0020251 Lupinus albus HOM05D007078 ORTHO05D008745 2.3e-62 243.0 139 79.9
Aa31LG1G29480 Aethionema arabicum HOM05D007078 ORTHO05D008745 5.2e-62 241.9 133 86.5
Sabra14G0103700 Salix brachista HOM05D007078 ORTHO05D008745 1.1e-61 240.7 132 86.4
BNapus_Darmor_BZH_scaffold_188p00040 Brassica napus HOM05D007078 ORTHO05D008745 3.3e-61 239.2 173 69.4
Ah.08g209880 Amaranthus hybridus HOM05D007078 ORTHO05D008745 4.8e-60 235.3 128 88.3
FAN24G3201 Fragaria x ananassa HOM05D007078 ORTHO05D008745 6.3e-60 235.0 133 84.2
AUR62026362 Chenopodium quinoa HOM05D007078 ORTHO05D008745 8.2e-60 234.6 129 86.8
AagrBONN_evm.TU.Sc2ySwM_117.1018 Anthoceros agrestis HOM05D007078 ORTHO05D008745 1.1e-59 234.2 141 75.9
Mapoly0037s0112 Marchantia polymorpha HOM05D007078 ORTHO05D008745 9.1e-59 231.1 138 78.3
SMO358G0655 Selaginella moellendorffii HOM05D007078 ORTHO05D008745 2.5e-56 223.0 142 71.8
Pp3c24_17730 Physcomitrium patens HOM05D007078 ORTHO05D008745 3.2e-56 222.6 147 71.4
CBR_g32237 Chara braunii HOM05D007078 ORTHO05D008745 1.1e-51 207.6 139 70.5
CDE01G0430 Ceratophyllum demersum HOM05D007078 ORTHO05D008745 1.0e-46 191.0 98 87.8
Oeu006229.1 Olea europaea HOM05D007078 ORTHO05D008745 1.5e-45 187.2 90 94.4
MCO10G051 Micromonas commoda HOM05D007078 ORTHO05D008745 1.6e-39 167.2 130 60.0
Cre03.g145207 Chlamydomonas reinhardtii HOM05D007078 ORTHO05D008745 2.1e-39 166.8 138 54.3
ClCG09G006760 Citrullus lanatus HOM05D007078 ORTHO05D008745 1.0e-38 164.5 135 64.4
MBI19_g21637_MAGBIO Magnolia biondii HOM05D007078 ORTHO05D008745 1.2e-37 161.0 134 63.4
SGA_v2.0_scaffold11G05787 Striga asiatica HOM05D007078 ORTHO05D008745 2.2e-36 156.8 136 60.3
Actinidia00723 Actinidia chinensis HOM05D007078 ORTHO05D008745 8.3e-36 154.8 75 92.0
Gohir.A08G070800 Gossypium hirsutum HOM05D007078 ORTHO05D008745 2.9e-33 146.4 165 53.3
PGR142G2005 Punica granatum HOM05D007078 ORTHO05D008745 1.1e-32 144.4 81 91.4
Zm00001eb287740 Zea mays HOM05D007078 ORTHO05D008745 1.1e-32 144.4 82 82.9
PRCOL_00000964 Prasinoderma coloniale HOM05D007078 ORTHO05D008745 1.5e-32 144.1 138 55.8
HPP92_019174 Vanilla planifolia HOM05D007078 ORTHO05D008745 2.1e-31 140.2 81 79.0
SEGI_07843 Sequoiadendron giganteum HOM05D007078 ORTHO05D008745 1.8e-30 137.1 80 78.8
Ca_08589_v3 Cicer arietinum L. HOM05D007078 ORTHO05D008745 2.0e-29 133.7 78 76.9
Peaxi162Scf00156g00061 Petunia axillaris HOM05D007078 ORTHO05D008745 9.8e-29 131.3 80 81.2
Actinidia24309 Actinidia chinensis HOM05D007078 ORTHO05D008745 1.6e-26 124.0 68 82.4
Hma1.2p1_0628F.1_g191770 Hydrangea macrophylla HOM05D007078 ORTHO05D008745 4.7e-23 112.5 56 91.1


User provided reference genes

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