Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGR044G0740 Punica granatum HOM05D000101 ORTHO05D336496 3.8e-182 641.3 317 100.0
PGR044G0454 Punica granatum HOM05D000101 ORTHO05D000089 3.3e-117 425.6 284 77.1
PGR044G2192 Punica granatum HOM05D000101 ORTHO05D000089 3.7e-113 412.1 284 73.6
PGR044G2196 Punica granatum HOM05D000101 ORTHO05D000089 1.5e-101 373.6 284 68.7
PGR044G0583 Punica granatum HOM05D000101 ORTHO05D000089 1.3e-94 350.5 284 65.1
PGR044G1659 Punica granatum HOM05D000101 ORTHO05D000089 1.8e-78 297.0 287 56.8
PGR044G2236 Punica granatum HOM05D000101 ORTHO05D000089 6.7e-78 295.0 290 55.9
PGR044G2520 Punica granatum HOM05D000101 ORTHO05D000089 4.8e-76 288.9 288 54.5
PGR044G2342 Punica granatum HOM05D000101 ORTHO05D000089 5.5e-72 275.4 290 51.4
PGR044G0438 Punica granatum HOM05D000101 ORTHO05D000089 7.6e-66 255.0 285 49.8
PGR044G0704 Punica granatum HOM05D000101 ORTHO05D000089 1.8e-62 243.8 275 49.8
PGR044G2118 Punica granatum HOM05D000101 ORTHO05D000089 7.9e-47 191.8 146 62.3
PGR132G0003 Punica granatum HOM05D000101 ORTHO05D000089 7.9e-47 191.8 146 62.3
PGR044G2445 Punica granatum HOM05D000101 ORTHO05D000089 6.5e-41 172.2 273 41.8
PGR044G0042 Punica granatum HOM05D000101 ORTHO05D336566 3.0e-38 163.3 249 42.6
PGR102G3083 Punica granatum HOM05D000101 ORTHO05D000089 5.6e-16 89.4 147 36.7
PGR044G0007 Punica granatum HOM05D000101 ORTHO05D336635 1.4e-14 84.7 89 57.3
Manes.11G053000 Manihot esculenta HOM05D000101 ORTHO05D000089 6.8e-14 82.4 200 30.0
Dinv24079 Davidia involucrata HOM05D000101 ORTHO05D000089 5.7e-13 79.3 159 35.2
Dinv11894 Davidia involucrata HOM05D000101 ORTHO05D000089 5.4e-11 72.8 116 35.3
Manes.04G115600 Manihot esculenta HOM05D000101 ORTHO05D000089 5.4e-11 72.8 96 38.5
PGR044G1825 Punica granatum HOM05D000101 ORTHO05D011607 7.8e-10 68.9 160 33.8
Dinv11884 Davidia involucrata HOM05D000101 ORTHO05D000089 1.3e-09 68.2 97 37.1
Ciclev10024832m.g Citrus clementina HOM05D000101 ORTHO05D000089 1.7e-09 67.8 133 32.3
Ciclev10027513m.g Citrus clementina HOM05D000101 ORTHO05D000089 1.7e-09 67.8 116 32.8
Ciclev10024837m.g Citrus clementina HOM05D000101 ORTHO05D000089 3.9e-09 66.6 112 34.8
Ciclev10026964m.g Citrus clementina HOM05D000101 ORTHO05D000089 8.6e-09 65.5 112 33.9
Ciclev10027172m.g Citrus clementina HOM05D000101 ORTHO05D000089 8.6e-09 65.5 116 31.9
Ciclev10027596m.g Citrus clementina HOM05D000101 ORTHO05D000089 1.1e-08 65.1 155 31.0
Duzib235G1014 Durio zibethinus HOM05D000101 ORTHO05D000089 1.5e-08 64.7 138 32.6
Ciclev10027582m.g Citrus clementina HOM05D000101 ORTHO05D000089 2.5e-08 63.9 116 32.8
Ciclev10024831m.g Citrus clementina HOM05D000101 ORTHO05D000089 3.3e-08 63.5 116 32.8
Ciclev10024838m.g Citrus clementina HOM05D000101 ORTHO05D000089 5.6e-08 62.8 116 32.8
Atru.chr2.3786 Acer truncatum HOM05D000101 ORTHO05D000089 1.6e-07 61.2 166 27.7
Atru.chr6.3510 Acer truncatum HOM05D000092 ORTHO05D000042 1.6e-07 61.2 150 30.0
Ciclev10027214m.g Citrus clementina HOM05D000101 ORTHO05D000089 1.6e-07 61.2 116 29.3
Aqoxy4G00407 Aquilegia oxysepala HOM05D000101 ORTHO05D000089 2.1e-07 60.8 148 32.4
AL7G44810 Arabidopsis lyrata HOM05D000101 ORTHO05D000089 2.1e-07 60.8 97 36.1
Ciclev10024835m.g Citrus clementina HOM05D000101 ORTHO05D000089 2.8e-07 60.5 116 29.3
Ciclev10027517m.g Citrus clementina HOM05D000101 ORTHO05D000089 2.8e-07 60.5 106 33.0
Gohir.A01G017150 Gossypium hirsutum HOM05D000101 ORTHO05D000089 3.6e-07 60.1 181 27.6
Lj4g0025142 Lotus japonicus HOM05D000101 ORTHO05D000089 6.2e-07 59.3 128 30.5
Dinv24082 Davidia involucrata HOM05D000101 ORTHO05D000089 8.0e-07 58.9 165 29.7
Medtr4g091380 Medicago truncatula HOM05D000101 ORTHO05D000089 1.1e-06 58.5 127 31.5
Ciclev10027347m.g Citrus clementina HOM05D000101 ORTHO05D000089 1.4e-06 58.2 111 32.4
BolC6t35969H Brassica oleracea HOM05D000101 ORTHO05D000089 2.3e-06 57.4 90 33.3
Sabra06G0116200 Salix brachista HOM05D000101 ORTHO05D000089 3.1e-06 57.0 176 29.0
BolC9t54847H Brassica oleracea HOM05D000101 ORTHO05D011607 5.2e-06 56.2 86 32.6
Prupe.3G080300 Prunus persica HOM05D000101 ORTHO05D000089 5.2e-06 56.2 253 24.5
Nn1g09664 Nelumbo nucifera HOM05D000101 ORTHO05D000089 6.8e-06 55.8 119 30.3


User provided reference genes

Program Settings