Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGR044G0728 Punica granatum HOM05D007026 ORTHO05D008493 3.9e-151 538.1 276 100.0
QL04p005492 Quercus lobata HOM05D007026 ORTHO05D008493 6.7e-66 255.0 298 55.0
Hma1.2p1_0293F.1_g116330 Hydrangea macrophylla HOM05D007026 ORTHO05D008493 4.0e-63 245.7 294 51.4
Cfa010744 Carpinus fangiana HOM05D007026 ORTHO05D008493 9.0e-63 244.6 188 68.6
TWI09G0295 Tripterygium wilfordii HOM05D007026 ORTHO05D008493 1.3e-61 240.7 194 67.5
Thecc.01G412700 Theobroma cacao HOM05D007026 ORTHO05D008493 2.2e-61 240.0 156 76.3
Prupe.2G010600 Prunus persica HOM05D007026 ORTHO05D008493 3.8e-61 239.2 180 69.4
vmacro21182 Vaccinium macrocarpon HOM05D007026 ORTHO05D008493 4.9e-61 238.8 295 51.2
ClCG09G004280 Citrullus lanatus HOM05D007026 ORTHO05D008493 8.4e-61 238.0 292 52.1
CsaV3_7G031200 Cucumis sativus L. HOM05D007026 ORTHO05D008493 2.4e-60 236.5 279 53.4
Sabra09G0047000 Salix brachista HOM05D007026 ORTHO05D008493 7.1e-60 235.0 318 49.7
Potri.009G063700 Populus trichocarpa HOM05D007026 ORTHO05D008493 1.2e-59 234.2 233 57.5
MD07G1007900 Malus domestica HOM05D007026 ORTHO05D008493 1.6e-59 233.8 196 62.8
Medtr8g036520 Medicago truncatula HOM05D007026 ORTHO05D008493 4.6e-59 232.3 284 52.1
MELO3C023538.2 Cucumis melo HOM05D007026 ORTHO05D008493 6.0e-59 231.9 282 53.2
Nn2g15423 Nelumbo nucifera HOM05D007026 ORTHO05D008493 6.0e-59 231.9 310 49.4
Rhsim01G0130400 Rhododendron simsii HOM05D007026 ORTHO05D008493 6.0e-59 231.9 164 73.2
Cc02_g27730 Coffea canephora HOM05D007026 ORTHO05D008493 1.3e-58 230.7 161 71.4
Ciclev10032288m.g Citrus clementina HOM05D007026 ORTHO05D008493 1.8e-58 230.3 297 48.8
Manes.10G145400 Manihot esculenta HOM05D007026 ORTHO05D008493 1.8e-58 230.3 179 67.6
Potri.001G269000 Populus trichocarpa HOM05D007026 ORTHO05D008493 1.8e-58 230.3 329 46.5
arahy.Tifrunner.gnm1.ann1.VL74DI Arachis hypogaea HOM05D007026 ORTHO05D008493 2.3e-58 229.9 176 68.2
Atru.chr11.2644 Acer truncatum HOM05D007026 ORTHO05D008493 3.9e-58 229.2 292 51.7
Lalb_Chr03g0033971 Lupinus albus HOM05D007026 ORTHO05D008493 5.1e-58 228.8 150 76.0
Cpa.g.sc245.8 Carica papaya HOM05D007026 ORTHO05D008493 6.7e-58 228.4 146 80.1
Haze_03229 Corylus avellana HOM05D007026 ORTHO05D008493 8.7e-58 228.0 169 71.0
CSS0028033 Camellia sinensis var. sinensis HOM05D007026 ORTHO05D008493 1.1e-57 227.6 156 73.7
RcHm_v2.0_Chr1g0315651 Rosa chinensis HOM05D007026 ORTHO05D008493 1.1e-57 227.6 153 75.8
Psat4g148320 Pisum sativum HOM05D007026 ORTHO05D008493 1.9e-57 226.9 293 50.2
THA.LOC104826673 Tarenaya hassleriana HOM05D007026 ORTHO05D008493 9.6e-57 224.6 209 59.8
CANSAT80G1756 Cannabis sativa HOM05D007026 ORTHO05D008493 1.3e-56 224.2 153 70.6
FAN03G2284 Fragaria x ananassa HOM05D007026 ORTHO05D008493 1.6e-56 223.8 170 68.2
Sc11g0009270 Simmondsia chinensis HOM05D007026 ORTHO05D008493 1.6e-56 223.8 158 70.9
FAN06G1399 Fragaria x ananassa HOM05D007026 ORTHO05D008493 3.7e-56 222.6 170 68.8
Duzib268G1513 Durio zibethinus HOM05D007026 ORTHO05D008493 1.1e-55 221.1 168 69.0
Peaxi162Scf00428g00077 Petunia axillaris HOM05D007026 ORTHO05D008493 1.1e-55 221.1 274 50.4
Actinidia21558 Actinidia chinensis HOM05D007026 ORTHO05D008493 1.4e-55 220.7 151 72.8
TAR623G0027 Trochodendron aralioides HOM05D007026 ORTHO05D008493 1.4e-55 220.7 295 48.5
Lj3g0000564 Lotus japonicus HOM05D007026 ORTHO05D008493 1.8e-55 220.3 292 49.3
TAR623G1735 Trochodendron aralioides HOM05D007026 ORTHO05D008493 2.4e-55 219.9 308 50.0
FAN10G3680 Fragaria x ananassa HOM05D007026 ORTHO05D008493 3.1e-55 219.5 170 68.2
Gohir.D08G166400 Gossypium hirsutum HOM05D007026 ORTHO05D008493 9.0e-55 218.0 175 68.6
Gorai.004G173800 Gossypium raimondii HOM05D007026 ORTHO05D008493 9.0e-55 218.0 175 68.6
SGA_v2.0_scaffold4G02258 Striga asiatica HOM05D007026 ORTHO05D008493 9.0e-55 218.0 186 64.0
MD02G1314200 Malus domestica HOM05D007026 ORTHO05D008493 3.4e-54 216.1 189 63.0
DCAR_029660 Daucus carota HOM05D007026 ORTHO05D008493 5.8e-54 215.3 157 70.7
PGSC0003DMG400024551 Solanum tuberosum HOM05D007026 ORTHO05D008493 2.2e-53 213.4 167 64.1
MSTRG.28077 Avicennia marina HOM05D007026 ORTHO05D008493 3.8e-53 212.6 171 66.1
Nitab4.5_0002881g0080 Nicotiana tabacum HOM05D007026 ORTHO05D008493 3.8e-53 212.6 164 65.2
Sopen03g034460 Solanum pennellii HOM05D007026 ORTHO05D008493 6.5e-53 211.8 164 64.0
Solyc03g115460.3 Solanum lycopersicum HOM05D007026 ORTHO05D008493 5.5e-52 208.8 164 62.8
Migut.A00762 Erythranthe guttata HOM05D007026 ORTHO05D008493 2.7e-51 206.5 144 72.9
Aqoxy1G00217 Aquilegia oxysepala HOM05D007026 ORTHO05D008493 1.3e-50 204.1 292 47.3
Migut.N01474 Erythranthe guttata HOM05D007026 ORTHO05D008493 1.8e-50 203.8 142 73.2
BcaC01g04025 Brassica carinata HOM05D007026 ORTHO05D008493 3.9e-50 202.6 188 59.0
BolC3t16854H Brassica oleracea HOM05D007026 ORTHO05D008493 3.9e-50 202.6 188 59.0
Lsat_1_v5_gn_1_108360 Lactuca sativa HOM05D007026 ORTHO05D008493 5.1e-50 202.2 280 45.7
C03p45790 Brassica napus HOM05D007026 ORTHO05D008493 6.7e-50 201.8 158 65.2
Glyma.13G204000 Glycine max HOM05D007026 ORTHO05D008493 4.3e-49 199.1 150 68.7
unitig_0.g1578 Utricularia gibba HOM05D007026 ORTHO05D008493 7.4e-49 198.4 154 64.3
Carub.0003s1200 Capsella rubella HOM05D007026 ORTHO05D008493 1.3e-48 197.6 155 66.5
AL3G24320 Arabidopsis lyrata HOM05D007026 ORTHO05D008493 2.8e-48 196.4 275 49.5
Phvul.011G212500 Phaseolus vulgaris HOM05D007026 ORTHO05D008493 3.7e-48 196.1 204 53.9
ECA248G3415 Erigeron canadensis HOM05D007026 ORTHO05D008493 4.8e-48 195.7 157 65.0
Lj7P569T60 Lonicera japonica HOM05D007026 ORTHO05D008493 4.8e-48 195.7 175 58.3
AT3G12650 Arabidopsis thaliana HOM05D007026 ORTHO05D008493 6.3e-48 195.3 167 64.7
COL.COLO4_23920 Corchorus olitorius HOM05D007026 ORTHO05D008493 6.3e-48 195.3 284 44.0
BcaB04g18713 Brassica carinata HOM05D007026 ORTHO05D008493 1.1e-47 194.5 148 66.9
A05p36850 Brassica napus HOM05D007026 ORTHO05D008493 1.4e-47 194.1 193 58.5
Sp3g10790 Schrenkiella parvula HOM05D007026 ORTHO05D008493 1.4e-47 194.1 165 62.4
VMungo1127G0427 Vigna mungo HOM05D007026 ORTHO05D008493 1.4e-47 194.1 191 56.0
A03p37740 Brassica napus HOM05D007026 ORTHO05D008493 2.4e-47 193.4 271 47.6
BraA03t12929Z Brassica rapa HOM05D007026 ORTHO05D008493 2.4e-47 193.4 271 47.6
BraA05t22486Z Brassica rapa HOM05D007026 ORTHO05D008493 3.1e-47 193.0 193 57.5
CARHR087160 Cardamine hirsuta HOM05D007026 ORTHO05D008493 5.3e-47 192.2 154 63.6
Sed0012425 Sechium edule HOM05D007026 ORTHO05D008493 5.3e-47 192.2 279 48.0
Thhalv10021417m.g Eutrema salsugineum HOM05D007026 ORTHO05D008493 1.2e-46 191.0 162 61.7
HanXRQChr06g0185391 Helianthus annuus HOM05D007026 ORTHO05D008493 2.0e-46 190.3 170 62.4
Aa31LG3G20 Aethionema arabicum HOM05D007026 ORTHO05D008493 7.7e-46 188.3 188 56.9
Nitab4.5_0005198g0030 Nicotiana tabacum HOM05D007026 ORTHO05D008493 1.0e-45 188.0 133 70.7
BcaB06g25527 Brassica carinata HOM05D007026 ORTHO05D008493 3.8e-45 186.0 190 56.8
SHI26926 Sapria himalayana HOM05D007026 ORTHO05D008493 3.2e-44 183.0 129 72.9
MBI01_g27619_MAGBIO Magnolia biondii HOM05D007026 ORTHO05D008493 7.2e-44 181.8 155 60.0
PSO339G4493 Papaver somniferum HOM05D007026 ORTHO05D008493 7.2e-44 181.8 160 58.8
Dinv09365 Davidia involucrata HOM05D007026 ORTHO05D008493 3.6e-43 179.5 254 46.9
ATR0605G064 Amborella trichopoda HOM05D007026 ORTHO05D008493 7.4e-41 171.8 180 52.8
Actinidia20675 Actinidia chinensis HOM05D007026 ORTHO05D008493 1.7e-40 170.6 119 71.4
Eucgr.J01262 Eucalyptus grandis HOM05D007026 ORTHO05D008493 1.7e-40 170.6 117 72.6
Dinv43456 Davidia involucrata HOM05D007026 ORTHO05D008493 6.3e-40 168.7 254 45.3
RcHm_v2.0_Chr1g0315371 Rosa chinensis HOM05D007026 ORTHO05D008493 1.1e-39 167.9 114 75.4
RcHm_v2.0_Chr1g0315191 Rosa chinensis HOM05D007026 ORTHO05D008493 3.1e-39 166.4 114 74.6
FvH4_7g00860 Fragaria vesca HOM05D007026 ORTHO05D008493 6.9e-39 165.2 130 66.2
RcHm_v2.0_Chr1g0315521 Rosa chinensis HOM05D007026 ORTHO05D008493 2.6e-38 163.3 114 73.7
HPP92_022795 Vanilla planifolia HOM05D007026 ORTHO05D008493 3.4e-38 162.9 155 56.1
Gohir.A08G145400 Gossypium hirsutum HOM05D007026 ORTHO05D008493 2.2e-37 160.2 141 61.7
RcHm_v2.0_Chr1g0315011 Rosa chinensis HOM05D007026 ORTHO05D008493 2.9e-37 159.8 114 73.7
BcaC05g29251 Brassica carinata HOM05D007026 ORTHO05D008493 7.9e-35 151.8 125 64.0
EL10Ac2g04312 Beta vulgaris HOM05D007026 ORTHO05D008493 1.1e-33 147.9 164 50.6
BolC5t34196H Brassica oleracea HOM05D007026 ORTHO05D008493 4.8e-32 142.5 116 63.8
PSO384G4663 Papaver somniferum HOM05D007026 ORTHO05D008493 4.1e-31 139.4 217 42.9
BcaB08g35591 Brassica carinata HOM05D007026 ORTHO05D008493 1.7e-29 134.0 144 55.6
Zm00001eb189290 Zea mays HOM05D007026 ORTHO05D008493 1.2e-27 127.9 238 36.6
Os02g0718000 Oryza sativa ssp. japonica HOM05D007026 ORTHO05D008493 2.3e-26 123.6 169 42.0
TPR.G17515 Trifolium pratense HOM05D007026 ORTHO05D008493 7.0e-23 112.1 278 36.0
AL7G43500 Arabidopsis lyrata HOM05D007026 ORTHO05D008493 8.5e-21 105.1 77 67.5
AUR62009374 Chenopodium quinoa HOM05D007026 ORTHO05D008493 1.2e-19 101.3 120 42.5
Nitab4.5_0004511g0060 Nicotiana tabacum HOM05D007026 ORTHO05D008493 1.4e-18 97.8 68 69.1
Pp3c2_10070 Physcomitrium patens HOM05D007026 ORTHO05D008493 2.0e-17 94.0 145 44.1
SMO147G0317 Selaginella moellendorffii HOM05D007026 ORTHO05D008493 8.3e-16 88.6 153 35.3
Nitab4.5_0000052g0150 Nicotiana tabacum HOM05D007026 ORTHO05D008493 9.1e-15 85.1 86 60.5
Mapoly0153s0019 Marchantia polymorpha HOM05D007026 ORTHO05D008493 2.5e-12 77.0 129 39.5
TPR.G28471 Trifolium pratense HOM05D007026 ORTHO05D008493 5.5e-12 75.9 39 92.3
Aqoxy1G00218 Aquilegia oxysepala HOM05D000196 ORTHO05D000279 9.4e-12 75.1 119 38.7
C05p55310 Brassica napus HOM05D007026 ORTHO05D008493 1.5e-09 67.8 51 68.6
AUR62044089 Chenopodium quinoa HOM05D005782 ORTHO05D007436 1.1e-07 61.6 94 37.2


User provided reference genes

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