Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGR044G0714 Punica granatum HOM05D007522 ORTHO05D009518 7.0e-185 650.6 353 100.0
Eucgr.C02839 Eucalyptus grandis HOM05D007522 ORTHO05D009518 1.6e-80 303.9 262 62.6
Gorai.013G238600 Gossypium raimondii HOM05D007522 ORTHO05D009518 1.3e-77 294.3 275 57.5
Eucgr.C02850 Eucalyptus grandis HOM05D007522 ORTHO05D009518 3.7e-77 292.7 253 62.5
Gohir.A13G204200 Gossypium hirsutum HOM05D007522 ORTHO05D009518 1.4e-76 290.8 278 57.2
Gohir.D13G209500 Gossypium hirsutum HOM05D007522 ORTHO05D009518 3.1e-76 289.7 275 57.1
GSVIVG01035795001 Vitis vinifera HOM05D007522 ORTHO05D009518 6.5e-74 282.0 287 54.7
COL.COLO4_24044 Corchorus olitorius HOM05D007522 ORTHO05D009518 3.2e-73 279.6 265 57.7
TAR383G0977 Trochodendron aralioides HOM05D007522 ORTHO05D009518 2.7e-72 276.6 313 51.8
arahy.Tifrunner.gnm1.ann1.J4BCXN Arachis hypogaea HOM05D007522 ORTHO05D009518 8.8e-71 271.6 282 53.2
Potri.006G247900 Populus trichocarpa HOM05D007522 ORTHO05D009518 2.2e-69 266.9 287 54.0
Sabra06G0193900 Salix brachista HOM05D007522 ORTHO05D009518 1.1e-68 264.6 275 55.3
Thecc.09G145600 Theobroma cacao HOM05D007522 ORTHO05D009518 4.1e-68 262.7 244 59.8
CSS0007980 Camellia sinensis var. sinensis HOM05D007522 ORTHO05D009518 2.6e-67 260.0 286 51.0
Glyma.06G072500 Glycine max HOM05D007522 ORTHO05D009518 7.7e-67 258.5 267 53.2
Manes.03G065616 Manihot esculenta HOM05D007522 ORTHO05D009518 1.0e-66 258.1 283 51.2
QL12p031480 Quercus lobata HOM05D007522 ORTHO05D009518 1.3e-66 257.7 373 46.6
Actinidia13430 Actinidia chinensis HOM05D007522 ORTHO05D009518 2.2e-66 256.9 310 50.0
Duzib187G1360 Durio zibethinus HOM05D007522 ORTHO05D009518 3.8e-66 256.1 245 58.4
Lj1g0002015 Lotus japonicus HOM05D007522 ORTHO05D009518 8.5e-66 255.0 261 53.3
Ciclev10009234m.g Citrus clementina HOM05D007522 ORTHO05D009518 2.5e-65 253.4 245 60.4
FAN15G2839 Fragaria x ananassa HOM05D007522 ORTHO05D009518 3.2e-65 253.1 256 56.2
FvH4_2g30000 Fragaria vesca HOM05D007522 ORTHO05D009518 7.2e-65 251.9 256 55.9
RcHm_v2.0_Chr6g0312911 Rosa chinensis HOM05D007522 ORTHO05D009518 9.4e-65 251.5 256 55.9
Eucgr.C02843 Eucalyptus grandis HOM05D007522 ORTHO05D009518 1.6e-64 250.8 290 52.8
Prupe.1G467900 Prunus persica HOM05D007522 ORTHO05D009518 2.1e-64 250.4 256 55.9
CiPaw.07G218500 Carya illinoinensis HOM05D007522 ORTHO05D009518 2.7e-64 250.0 257 54.1
C01p06400 Brassica napus HOM05D007522 ORTHO05D009518 1.4e-63 247.7 268 53.0
BolC1t00636H Brassica oleracea HOM05D007522 ORTHO05D009518 1.4e-63 247.7 268 53.0
THA.LOC104819887 Tarenaya hassleriana HOM05D007522 ORTHO05D009518 1.4e-63 247.7 318 47.5
MD15G1116400 Malus domestica HOM05D007522 ORTHO05D009518 4.0e-63 246.1 266 52.6
PSO782G1743 Papaver somniferum HOM05D007522 ORTHO05D009518 4.0e-63 246.1 286 52.4
Ca_15704_v3 Cicer arietinum L. HOM05D000186 ORTHO05D001124 6.7e-63 245.4 265 52.1
BcaC09g52047 Brassica carinata HOM05D007522 ORTHO05D009518 2.0e-62 243.8 287 49.1
BraA01t00551Z Brassica rapa HOM05D007522 ORTHO05D009518 3.3e-62 243.0 292 49.0
Oeu014660.1 Olea europaea HOM05D007522 ORTHO05D009518 3.3e-62 243.0 278 51.4
A01p05830 Brassica napus HOM05D007522 ORTHO05D009518 7.5e-62 241.9 292 49.0
Carub.0007s0799 Capsella rubella HOM05D007522 ORTHO05D009518 9.7e-62 241.5 300 47.3
Eucgr.C02854 Eucalyptus grandis HOM05D007522 ORTHO05D009518 9.7e-62 241.5 231 60.2
Lalb_Chr08g0243841 Lupinus albus HOM05D007522 ORTHO05D009518 1.3e-61 241.1 289 49.5
AT4G32560 Arabidopsis thaliana HOM05D007522 ORTHO05D009518 2.2e-61 240.4 300 46.7
Phvul.009G097000 Phaseolus vulgaris HOM05D007522 ORTHO05D009518 2.8e-61 240.0 281 47.7
FAN24G0147 Fragaria x ananassa HOM05D007522 ORTHO05D009518 4.8e-61 239.2 246 54.9
Aa31LG4G11730 Aethionema arabicum HOM05D007522 ORTHO05D009518 8.2e-61 238.4 302 46.7
Thhalv10025779m.g Eutrema salsugineum HOM05D007522 ORTHO05D009518 8.2e-61 238.4 286 47.6
AL7G19200 Arabidopsis lyrata HOM05D007522 ORTHO05D009518 1.1e-60 238.0 308 45.8
TPR.G34679 Trifolium pratense HOM05D007522 ORTHO05D009518 1.4e-60 237.7 276 51.8
CARHR240530 Cardamine hirsuta HOM05D007522 ORTHO05D009518 1.8e-60 237.3 266 50.4
PSO063G3677 Papaver somniferum HOM05D007522 ORTHO05D009518 2.4e-60 236.9 276 52.5
ATR0083G062 Amborella trichopoda HOM05D007522 ORTHO05D009518 1.6e-59 234.2 320 44.7
Sp7g30340 Schrenkiella parvula HOM05D007522 ORTHO05D009518 1.6e-59 234.2 280 48.9
arahy.Tifrunner.gnm1.ann1.EE81AI Arachis hypogaea HOM05D007522 ORTHO05D009518 2.0e-59 233.8 221 56.6
Eucgr.L02345 Eucalyptus grandis HOM05D007522 ORTHO05D009518 2.7e-59 233.4 224 59.4
VMungo1309G1471 Vigna mungo HOM05D007522 ORTHO05D009518 2.7e-59 233.4 244 52.5
Medtr3g108530 Medicago truncatula HOM05D007522 ORTHO05D009518 4.5e-59 232.6 264 51.1
CsaV3_2G031690 Cucumis sativus L. HOM05D007522 ORTHO05D009518 5.0e-58 229.2 255 51.0
Sed0015375 Sechium edule HOM05D007522 ORTHO05D009518 4.2e-57 226.1 270 47.8
MELO3C011219.2 Cucumis melo HOM05D007522 ORTHO05D009518 5.5e-57 225.7 262 48.5
Aqoxy2G01954 Aquilegia oxysepala HOM05D007522 ORTHO05D009518 1.6e-56 224.2 264 51.9
MSTRG.25867 Avicennia marina HOM05D007522 ORTHO05D009518 2.1e-56 223.8 258 50.0
HanXRQChr13g0402121 Helianthus annuus HOM05D007522 ORTHO05D009518 5.2e-55 219.2 263 46.0
EL10Ac2g02553 Beta vulgaris HOM05D007522 ORTHO05D009518 3.4e-54 216.5 241 51.5
Solyc06g011403.1 Solanum lycopersicum HOM05D007522 ORTHO05D009518 3.4e-54 216.5 252 49.6
Sopen06g006080 Solanum pennellii HOM05D007522 ORTHO05D009518 3.4e-54 216.5 252 50.0
Cc11_g01290 Coffea canephora HOM05D007522 ORTHO05D009518 7.5e-54 215.3 236 51.3
Peaxi162Scf00267g00097 Petunia axillaris HOM05D007522 ORTHO05D009518 9.8e-54 214.9 256 49.6
FAN27G1610 Fragaria x ananassa HOM05D007522 ORTHO05D009518 2.2e-53 213.8 220 55.9
ECA233G0736 Erigeron canadensis HOM05D007522 ORTHO05D009518 2.8e-53 213.4 260 46.5
Rhsim02G0189000 Rhododendron simsii HOM05D007522 ORTHO05D009518 4.1e-52 209.5 239 52.7
Nn8g39310 Nelumbo nucifera HOM05D007522 ORTHO05D009518 2.0e-51 207.2 291 45.7
Atru.chr7.2341 Acer truncatum HOM05D007522 ORTHO05D009518 5.0e-50 202.6 197 58.4
Migut.A00284 Erythranthe guttata HOM05D007522 ORTHO05D009518 2.5e-49 200.3 258 47.3
Psat0s1782g0120 Pisum sativum HOM05D007522 ORTHO05D009518 1.4e-47 194.5 226 51.3
Lsat_1_v5_gn_6_22860 Lactuca sativa HOM05D007522 ORTHO05D009518 4.0e-47 193.0 264 43.9
AUR62032367 Chenopodium quinoa HOM05D007522 ORTHO05D009518 3.7e-45 186.4 205 53.2
Dinv30202 Davidia involucrata HOM05D007522 ORTHO05D009518 4.9e-45 186.0 207 53.1
CANSAT11G2673 Cannabis sativa HOM05D007522 ORTHO05D009518 1.1e-44 184.9 193 52.8
Pp3c10_19840 Physcomitrium patens HOM05D007522 ORTHO05D009518 4.5e-43 179.5 282 39.4
AagrBONN_evm.TU.Sc2ySwM_117.2977 Anthoceros agrestis HOM05D007522 ORTHO05D009518 4.3e-41 172.9 302 37.4
vmacro11126 Vaccinium macrocarpon HOM05D007522 ORTHO05D009518 2.1e-40 170.6 357 36.1
Cpa.g.sc91.26 Carica papaya HOM05D007522 ORTHO05D009518 4.9e-37 159.5 355 38.6
Mapoly0015s0053 Marchantia polymorpha HOM05D007522 ORTHO05D009518 2.4e-36 157.1 289 33.2
HPP92_008699 Vanilla planifolia HOM05D002348 ORTHO05D002512 3.5e-35 153.3 286 38.1
Ah.10g025820 Amaranthus hybridus HOM05D007522 ORTHO05D009518 6.0e-35 152.5 163 55.8
AUR62024852 Chenopodium quinoa HOM05D007522 ORTHO05D009518 1.7e-34 151.0 254 43.3
CDE02G2364 Ceratophyllum demersum HOM05D007522 ORTHO05D009518 1.2e-30 138.3 246 39.0
Haze_21613 Corylus avellana HOM05D007522 ORTHO05D009518 3.4e-30 136.7 335 34.9
SalBow8G3415 Salvia bowleyana HOM05D007522 ORTHO05D009518 3.7e-29 133.3 107 64.5
CBR_g51241 Chara braunii HOM05D007522 ORTHO05D009518 4.7e-24 116.3 271 31.0
MD08G1138500 Malus domestica HOM05D007522 ORTHO05D009518 4.7e-24 116.3 92 65.2
Glyma.04G070700 Glycine max HOM05D007522 ORTHO05D009518 4.9e-21 106.3 133 45.1
CBR_g75925 Chara braunii HOM05D007522 ORTHO05D009518 3.0e-18 97.1 136 39.7
MD08G1138600 Malus domestica HOM05D007522 ORTHO05D009518 3.3e-17 93.6 122 45.1
Cfa021321 Carpinus fangiana HOM05D007522 ORTHO05D009518 1.9e-12 77.8 87 50.6
SEGI_07807 Sequoiadendron giganteum HOM05D007522 ORTHO05D009518 1.0e-10 72.0 75 48.0
Glyma.04G070800 Glycine max HOM05D007522 ORTHO05D009518 5.8e-06 56.2 51 51.0


User provided reference genes

Program Settings