Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGR044G0668 Punica granatum HOM05D007596 ORTHO05D009672 2.8e-154 548.5 265 100.0
Eucgr.K02859 Eucalyptus grandis HOM05D007596 ORTHO05D009672 2.6e-120 435.6 267 78.3
CiPaw.11G029100 Carya illinoinensis HOM05D007596 ORTHO05D009672 2.0e-112 409.5 260 74.2
TWI15G1048 Tripterygium wilfordii HOM05D007596 ORTHO05D009672 1.2e-109 400.2 266 71.4
Potri.012G078600 Populus trichocarpa HOM05D007596 ORTHO05D009672 2.1e-109 399.4 256 73.4
CANSAT80G2510 Cannabis sativa HOM05D007596 ORTHO05D009672 2.7e-109 399.1 266 72.2
Thecc.03G008700 Theobroma cacao HOM05D007596 ORTHO05D009672 2.7e-109 399.1 266 71.1
Duzib205G0154 Durio zibethinus HOM05D007596 ORTHO05D009672 4.0e-108 395.2 266 70.7
Lj4g0018893 Lotus japonicus HOM05D007596 ORTHO05D009672 5.2e-108 394.8 266 69.5
Ciclev10021737m.g Citrus clementina HOM05D007596 ORTHO05D009672 4.4e-107 391.7 265 71.7
Gohir.A09G169500 Gossypium hirsutum HOM05D007596 ORTHO05D009672 1.3e-106 390.2 266 69.5
Lj9A451T97 Lonicera japonica HOM05D007596 ORTHO05D009672 2.2e-106 389.4 256 71.5
Gorai.006G187000 Gossypium raimondii HOM05D007596 ORTHO05D009672 2.8e-106 389.0 266 68.8
Manes.06G103100 Manihot esculenta HOM05D007596 ORTHO05D009672 3.7e-106 388.7 266 69.9
Rhsim12G0163300 Rhododendron simsii HOM05D007596 ORTHO05D009672 8.3e-106 387.5 268 69.0
Phvul.003G198900 Phaseolus vulgaris HOM05D007596 ORTHO05D009672 1.2e-104 383.6 266 68.0
Sed0010804 Sechium edule HOM05D007596 ORTHO05D009672 1.2e-104 383.6 266 68.0
CSS0015692 Camellia sinensis var. sinensis HOM05D007596 ORTHO05D009672 4.5e-104 381.7 256 69.5
Psat4g056920 Pisum sativum HOM05D007596 ORTHO05D009672 1.0e-103 380.6 267 67.0
arahy.Tifrunner.gnm1.ann1.8F9XT7 Arachis hypogaea HOM05D007596 ORTHO05D009672 1.3e-103 380.2 266 68.0
vmacro16599 Vaccinium macrocarpon HOM05D007596 ORTHO05D009672 1.3e-103 380.2 268 68.3
TAR374G1438 Trochodendron aralioides HOM05D007596 ORTHO05D009672 2.2e-103 379.4 268 67.2
CsaV3_1G008350 Cucumis sativus L. HOM05D007596 ORTHO05D009672 2.9e-103 379.0 266 68.0
MD06G1177600 Malus domestica HOM05D007596 ORTHO05D009672 2.9e-103 379.0 261 70.5
RcHm_v2.0_Chr7g0193891 Rosa chinensis HOM05D007596 ORTHO05D009672 3.8e-103 378.6 263 68.8
ClCG01G013000 Citrullus lanatus HOM05D007596 ORTHO05D009672 8.5e-103 377.5 266 67.7
GSVIVG01007788001 Vitis vinifera HOM05D007596 ORTHO05D009672 8.5e-103 377.5 256 69.1
Atru.chr9.2439 Acer truncatum HOM05D007596 ORTHO05D009672 3.2e-102 375.6 256 69.9
Sabra12G0056400 Salix brachista HOM05D007596 ORTHO05D009672 5.5e-102 374.8 298 61.7
arahy.Tifrunner.gnm1.ann1.3E9X4W Arachis hypogaea HOM05D007596 ORTHO05D009672 7.2e-102 374.4 266 67.7
Nn4g22825 Nelumbo nucifera HOM05D007596 ORTHO05D009672 4.7e-101 371.7 257 69.6
EL10Ac5g10784 Beta vulgaris HOM05D007596 ORTHO05D009672 1.8e-100 369.8 268 65.7
Lalb_Chr13g0297881 Lupinus albus HOM05D007596 ORTHO05D009672 1.8e-100 369.8 266 64.7
Cc04_g12800 Coffea canephora HOM05D007596 ORTHO05D009672 3.0e-100 369.0 268 65.7
Glyma.05G036200 Glycine max HOM05D007596 ORTHO05D009672 3.0e-100 369.0 256 66.0
Nitab4.5_0000003g0490 Nicotiana tabacum HOM05D007596 ORTHO05D009672 2.0e-99 366.3 265 66.8
FAN13G0067 Fragaria x ananassa HOM05D007596 ORTHO05D009672 2.6e-99 365.9 257 67.7
FAN18G0106 Fragaria x ananassa HOM05D007596 ORTHO05D009672 3.4e-99 365.5 257 67.7
SGA_v2.0_scaffold90G27960 Striga asiatica HOM05D007596 ORTHO05D009672 3.4e-99 365.5 268 66.8
FvH4_5g05110 Fragaria vesca HOM05D007596 ORTHO05D009672 4.4e-99 365.2 257 67.7
Nitab4.5_0007803g0020 Nicotiana tabacum HOM05D007596 ORTHO05D009672 5.7e-99 364.8 265 67.2
FAN08G2413 Fragaria x ananassa HOM05D007596 ORTHO05D009672 1.3e-98 363.6 255 67.8
PGSC0003DMG400027097 Solanum tuberosum HOM05D007596 ORTHO05D009672 1.7e-98 363.2 265 66.8
Sopen06g027660 Solanum pennellii HOM05D007596 ORTHO05D009672 3.7e-98 362.1 265 66.8
DCAR_026124 Daucus carota HOM05D007596 ORTHO05D009672 1.8e-97 359.8 254 66.1
Oeu041561.1 Olea europaea HOM05D007596 ORTHO05D009672 4.1e-97 358.6 256 66.0
Solyc06g071380.3 Solanum lycopersicum HOM05D007596 ORTHO05D009672 4.1e-97 358.6 265 66.4
Hma1.2p1_0701F.1_g205970 Hydrangea macrophylla HOM05D007596 ORTHO05D009672 9.1e-97 357.5 258 67.1
Medtr4g106630 Medicago truncatula HOM05D007596 ORTHO05D009672 2.0e-96 356.3 261 64.0
Aqoxy3G00967 Aquilegia oxysepala HOM05D007596 ORTHO05D009672 4.5e-96 355.1 266 63.9
COL.COLO4_34057 Corchorus olitorius HOM05D007596 ORTHO05D009672 8.6e-95 350.9 269 64.3
PSO063G6591 Papaver somniferum HOM05D007596 ORTHO05D009672 8.6e-95 350.9 268 62.3
Hund02735 Selenicereus undatus HOM05D007596 ORTHO05D009672 1.9e-94 349.7 265 64.9
ECA232G2922 Erigeron canadensis HOM05D007596 ORTHO05D009672 1.6e-93 346.7 254 62.6
HanXRQChr16g0503661 Helianthus annuus HOM05D007596 ORTHO05D009672 2.8e-93 345.9 265 62.6
HPP92_019181 Vanilla planifolia HOM05D007596 ORTHO05D009672 2.8e-93 345.9 265 63.8
FAN18G0038 Fragaria x ananassa HOM05D007596 ORTHO05D009672 6.1e-93 344.7 249 66.3
SalBow5G3112 Salvia bowleyana HOM05D007596 ORTHO05D009672 1.0e-92 344.0 267 65.2
Migut.I00032 Erythranthe guttata HOM05D007596 ORTHO05D009672 1.4e-92 343.6 256 68.0
MBI15_g31109_MAGBIO Magnolia biondii HOM05D007596 ORTHO05D009672 1.4e-92 343.6 257 63.8
TPR.G37562 Trifolium pratense HOM05D007596 ORTHO05D009672 4.0e-92 342.0 267 61.8
MSTRG.11436 Avicennia marina HOM05D007596 ORTHO05D009672 5.2e-92 341.7 268 64.9
Gohir.D09G165200 Gossypium hirsutum HOM05D007596 ORTHO05D009672 2.0e-91 339.7 266 62.8
Cfa019092 Carpinus fangiana HOM05D007596 ORTHO05D009672 5.7e-91 338.2 217 74.7
Dinv20674 Davidia involucrata HOM05D007596 ORTHO05D009672 6.3e-90 334.7 224 70.5
Psat4g101560 Pisum sativum HOM05D007596 ORTHO05D009672 4.5e-88 328.6 254 62.2
Peaxi162Scf00689g00036 Petunia axillaris HOM05D007596 ORTHO05D009672 7.5e-83 311.2 265 59.6
PSO832G1789 Papaver somniferum HOM05D007596 ORTHO05D009672 2.0e-80 303.1 229 61.1
Lsat_1_v5_gn_4_73100 Lactuca sativa HOM05D007596 ORTHO05D009672 7.8e-80 301.2 265 56.2
VMungo1215G2651 Vigna mungo HOM05D007596 ORTHO05D009672 3.0e-79 299.3 267 56.9
ATR0691G114 Amborella trichopoda HOM05D007596 ORTHO05D009672 1.3e-74 283.9 224 60.3
Os04g0465800 Oryza sativa ssp. japonica HOM05D007596 ORTHO05D009672 3.2e-73 279.3 228 57.9
Zm00001eb080350 Zea mays HOM05D007596 ORTHO05D009672 7.0e-73 278.1 228 59.6
Prupe.5G176300 Prunus persica HOM05D007596 ORTHO05D009672 4.0e-68 262.3 182 69.8
Ca_21906_v3 Cicer arietinum L. HOM05D007596 ORTHO05D009672 1.9e-62 243.4 175 64.6
Ca_21924_v3 Cicer arietinum L. HOM05D007596 ORTHO05D009672 1.9e-62 243.4 175 64.6
Sc04g0001910 Simmondsia chinensis HOM05D007596 ORTHO05D009672 1.1e-60 237.7 183 62.8
QL10p012241 Quercus lobata HOM05D007596 ORTHO05D009672 2.6e-51 206.5 136 72.1
CiPaw.11G029000 Carya illinoinensis HOM05D007596 ORTHO05D009672 4.4e-51 205.7 124 73.4
Glyma.17G091200 Glycine max HOM05D007596 ORTHO05D009672 7.6e-51 204.9 201 50.7
unitig_26.g8797 Utricularia gibba HOM05D007596 ORTHO05D009672 2.9e-50 203.0 286 43.7
Ah.13g077910 Amaranthus hybridus HOM05D007596 ORTHO05D004562 3.8e-50 202.6 182 53.3
SMO347G0014 Selaginella moellendorffii HOM05D007596 ORTHO05D009672 1.5e-46 190.7 183 51.4
Haze_07490 Corylus avellana HOM05D007596 ORTHO05D009672 4.5e-43 179.1 135 68.1
SGA_v2.0_scaffold90G27962 Striga asiatica HOM05D007596 ORTHO05D009672 4.5e-43 179.1 165 55.2
CBR_g18641 Chara braunii HOM05D007596 ORTHO05D009672 7.1e-41 171.8 143 56.6
AUR62030990 Chenopodium quinoa HOM05D007596 ORTHO05D009672 1.7e-34 150.6 133 56.4
FAN04G0664 Fragaria x ananassa HOM05D007596 ORTHO05D009672 1.7e-34 150.6 131 57.3
COL.COLO4_33480 Corchorus olitorius HOM05D007596 ORTHO05D009672 3.8e-34 149.4 110 65.5
FvH4_5g16630 Fragaria vesca HOM05D007596 ORTHO05D009672 5.7e-30 135.6 312 30.8
FAN18G2080 Fragaria x ananassa HOM05D007596 ORTHO05D009672 1.6e-29 134.0 312 30.8
Cpa.g.c40406 Carica papaya HOM05D007596 ORTHO05D009672 3.1e-28 129.8 105 60.0
SGA_v2.0_scaffold90G27967 Striga asiatica HOM05D007596 ORTHO05D009672 8.8e-15 85.1 75 57.3
EL10Ac4g09605 Beta vulgaris HOM05D004918 ORTHO05D005706 1.1e-14 84.7 111 45.0
SGA_v2.0_scaffold90G27974 Striga asiatica HOM05D001155 ORTHO05D001080 9.7e-14 81.6 75 53.3
Sc11g0005570 Simmondsia chinensis HOM05D007596 ORTHO05D009672 2.2e-13 80.5 59 61.0
Sc11g0005890 Simmondsia chinensis HOM05D007596 ORTHO05D009672 3.7e-13 79.7 59 61.0


User provided reference genes

Program Settings