Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGR044G0638 Punica granatum HOM05D007058 ORTHO05D009036 9.7e-234 813.1 422 100.0
Dinv12229 Davidia involucrata HOM05D007058 ORTHO05D009036 2.9e-153 545.8 441 66.4
GSVIVG01008345001 Vitis vinifera HOM05D007058 ORTHO05D009036 4.3e-149 531.9 400 68.0
QL10p026796 Quercus lobata HOM05D007058 ORTHO05D009036 9.6e-149 530.8 426 66.0
Hma1.2p1_2594F.1_g325085 Hydrangea macrophylla HOM05D007058 ORTHO05D009036 2.8e-148 529.3 440 64.3
Lj9A424T33 Lonicera japonica HOM05D007058 ORTHO05D009036 1.4e-147 526.9 391 70.3
Hma1.2p1_1614F.1_g293670 Hydrangea macrophylla HOM05D007058 ORTHO05D009036 1.8e-147 526.6 400 68.0
Actinidia02670 Actinidia chinensis HOM05D007058 ORTHO05D009036 9.9e-146 520.8 414 66.2
Eucgr.K02237 Eucalyptus grandis HOM05D007058 ORTHO05D009036 4.2e-144 515.4 346 74.6
Nn3g17960 Nelumbo nucifera HOM05D007058 ORTHO05D009036 4.6e-143 511.9 429 62.2
Ciclev10020201m.g Citrus clementina HOM05D007058 ORTHO05D009036 6.0e-143 511.5 403 66.7
TAR629G3445 Trochodendron aralioides HOM05D007058 ORTHO05D009036 1.3e-142 510.4 401 64.1
Sc12g0007400 Simmondsia chinensis HOM05D007058 ORTHO05D009036 5.1e-142 508.4 377 68.7
Thecc.03G043100 Theobroma cacao HOM05D007058 ORTHO05D009036 6.7e-142 508.1 411 65.0
TAR535G0005 Trochodendron aralioides HOM05D007058 ORTHO05D009036 1.1e-141 507.3 401 64.1
Prupe.5G225300 Prunus persica HOM05D007058 ORTHO05D009036 1.5e-141 506.9 435 62.5
Atru.chr9.916 Acer truncatum HOM05D007058 ORTHO05D009036 5.6e-141 505.0 407 65.6
MD06G1220900 Malus domestica HOM05D007058 ORTHO05D009036 7.4e-141 504.6 434 62.0
RcHm_v2.0_Chr7g0179381 Rosa chinensis HOM05D007058 ORTHO05D009036 9.6e-141 504.2 391 65.7
FAN08G1503 Fragaria x ananassa HOM05D007058 ORTHO05D009036 1.1e-139 500.7 431 61.3
FAN04G2101 Fragaria x ananassa HOM05D007058 ORTHO05D009036 1.4e-139 500.4 432 61.6
COL.COLO4_38517 Corchorus olitorius HOM05D007058 ORTHO05D009036 2.4e-139 499.6 424 63.4
Gohir.A07G059500 Gossypium hirsutum HOM05D007058 ORTHO05D009036 9.0e-139 497.7 408 63.7
FAN18G2897 Fragaria x ananassa HOM05D007058 ORTHO05D009036 2.0e-138 496.5 432 60.6
Duzib205G0828 Durio zibethinus HOM05D007058 ORTHO05D009036 2.6e-138 496.1 382 67.0
FAN13G1457 Fragaria x ananassa HOM05D007058 ORTHO05D009036 2.6e-138 496.1 431 60.6
Manes.01G015400 Manihot esculenta HOM05D007058 ORTHO05D009036 2.6e-138 496.1 415 63.1
CANSAT80G0903 Cannabis sativa HOM05D007058 ORTHO05D009036 5.8e-138 495.0 407 63.6
Cc04_g06820 Coffea canephora HOM05D007058 ORTHO05D009036 5.8e-138 495.0 393 65.1
MD14G1230300 Malus domestica HOM05D007058 ORTHO05D009036 3.2e-136 489.2 434 61.1
TWI60G0394 Tripterygium wilfordii HOM05D007058 ORTHO05D009036 2.1e-135 486.5 411 63.0
CsaV3_1G006960 Cucumis sativus L. HOM05D007058 ORTHO05D009036 6.0e-135 485.0 436 59.2
MELO3C002112.2 Cucumis melo HOM05D007058 ORTHO05D009036 1.3e-134 483.8 434 59.4
Sabra12G0037400 Salix brachista HOM05D007058 ORTHO05D009036 1.8e-134 483.4 387 64.3
Sed0017039 Sechium edule HOM05D007058 ORTHO05D009036 3.0e-134 482.6 402 63.4
Cpa.g.sc3.458 Carica papaya HOM05D007058 ORTHO05D009036 8.7e-134 481.1 407 61.9
Potri.012G053600 Populus trichocarpa HOM05D007058 ORTHO05D009036 1.1e-133 480.7 410 61.2
Aqoxy3G04055 Aquilegia oxysepala HOM05D007058 ORTHO05D009036 9.7e-133 477.6 376 62.5
arahy.Tifrunner.gnm1.ann1.8NC01M Arachis hypogaea HOM05D007058 ORTHO05D009036 1.3e-132 477.2 401 62.3
TAR371G0970 Trochodendron aralioides HOM05D007058 ORTHO05D009036 2.8e-132 476.1 396 60.6
Peaxi162Scf00683g00337 Petunia axillaris HOM05D007058 ORTHO05D009036 8.2e-132 474.6 398 63.6
arahy.Tifrunner.gnm1.ann1.LC4GJT Arachis hypogaea HOM05D007058 ORTHO05D009036 1.1e-131 474.2 401 62.1
Hund02350 Selenicereus undatus HOM05D007058 ORTHO05D009036 1.4e-131 473.8 378 64.8
Haze_18744 Corylus avellana HOM05D007058 ORTHO05D009036 1.8e-131 473.4 399 63.4
Nitab4.5_0001456g0070 Nicotiana tabacum HOM05D007058 ORTHO05D009036 5.3e-131 471.9 406 62.3
EL10Ac5g11484 Beta vulgaris HOM05D007058 ORTHO05D009036 3.4e-130 469.2 419 58.2
Nitab4.5_0006894g0050 Nicotiana tabacum HOM05D007058 ORTHO05D009036 5.9e-130 468.4 377 65.3
AUR62033787 Chenopodium quinoa HOM05D007058 ORTHO05D009036 2.9e-129 466.1 400 59.8
Migut.I00419 Erythranthe guttata HOM05D007058 ORTHO05D009036 2.9e-129 466.1 407 61.9
THA.LOC104813907 Tarenaya hassleriana HOM05D007058 ORTHO05D009036 2.9e-129 466.1 400 62.8
ClCG04G010870 Citrullus lanatus HOM05D007058 ORTHO05D009036 1.1e-128 464.2 427 58.5
PGSC0003DMG400005667 Solanum tuberosum HOM05D007058 ORTHO05D009036 1.9e-128 463.4 408 61.8
MBI16_g25105_MAGBIO Magnolia biondii HOM05D007058 ORTHO05D009036 7.9e-127 458.0 407 59.0
Solyc03g118860.3 Solanum lycopersicum HOM05D007058 ORTHO05D009036 2.3e-126 456.4 408 60.8
Sopen03g037810 Solanum pennellii HOM05D007058 ORTHO05D009036 2.3e-126 456.4 394 62.4
PSO063G1254 Papaver somniferum HOM05D007058 ORTHO05D009036 3.9e-126 455.7 376 62.2
PSO782G5502 Papaver somniferum HOM05D007058 ORTHO05D009036 1.9e-125 453.4 382 60.5
CAN.G1129.46 Capsicum annuum HOM05D007058 ORTHO05D009036 3.4e-122 442.6 388 61.6
Lj4g0007182 Lotus japonicus HOM05D007058 ORTHO05D009036 3.4e-122 442.6 387 60.5
ATR0681G321 Amborella trichopoda HOM05D007058 ORTHO05D009036 1.0e-121 441.0 376 59.3
VMungo0251G0619 Vigna mungo HOM05D007058 ORTHO05D009036 3.2e-120 436.0 400 58.2
HPP92_023400 Vanilla planifolia HOM05D007058 ORTHO05D009036 1.2e-119 434.1 371 58.0
CARHR066810 Cardamine hirsuta HOM05D007058 ORTHO05D009036 7.4e-117 424.9 428 54.0
Thhalv10018574m.g Eutrema salsugineum HOM05D007058 ORTHO05D009036 2.4e-115 419.9 404 54.5
Sp5g28930 Schrenkiella parvula HOM05D007058 ORTHO05D009036 4.5e-114 415.6 407 53.8
Carub.0002s2049 Capsella rubella HOM05D007058 ORTHO05D009036 5.9e-114 415.2 399 54.9
BraA07t31509Z Brassica rapa HOM05D007058 ORTHO05D009036 7.7e-114 414.8 399 54.6
A07p39600 Brassica napus HOM05D007058 ORTHO05D009036 1.7e-113 413.7 399 54.6
AL2G33550 Arabidopsis lyrata HOM05D007058 ORTHO05D009036 2.9e-113 412.9 400 54.5
Aa31LG4G4070 Aethionema arabicum HOM05D007058 ORTHO05D009036 5.0e-113 412.1 380 57.1
BcaB03g15080 Brassica carinata HOM05D007058 ORTHO05D009036 3.2e-112 409.5 405 54.3
C06p47890 Brassica napus HOM05D007058 ORTHO05D009036 3.2e-112 409.5 399 54.9
BolC6t39824H Brassica oleracea HOM05D007058 ORTHO05D009036 3.2e-112 409.5 399 54.9
AT1G73740 Arabidopsis thaliana HOM05D007058 ORTHO05D009036 7.2e-112 408.3 399 54.1
Oeu017513.1 Olea europaea HOM05D007058 ORTHO05D009036 1.6e-111 407.1 340 63.5
Gorai.001G067900 Gossypium raimondii HOM05D007058 ORTHO05D009036 1.1e-109 401.0 327 63.0
Phvul.002G325300 Phaseolus vulgaris HOM05D007058 ORTHO05D009036 3.7e-108 396.0 342 59.6
HPP92_027335 Vanilla planifolia HOM05D007058 ORTHO05D009036 1.9e-104 383.6 389 52.4
HPP92_017197 Vanilla planifolia HOM05D007058 ORTHO05D009036 1.6e-103 380.6 389 52.2
AUR62029919 Chenopodium quinoa HOM05D007058 ORTHO05D009036 1.8e-99 367.1 320 58.4
Glyma.05G242000 Glycine max HOM05D007058 ORTHO05D009036 1.2e-95 354.4 317 57.4
FvH4_5g16720 Fragaria vesca HOM05D007058 ORTHO05D009036 3.1e-91 339.7 315 56.2
Rhsim08G0129700 Rhododendron simsii HOM05D007058 ORTHO05D009036 1.2e-90 337.8 301 59.8
Mapoly0014s0012 Marchantia polymorpha HOM05D007058 ORTHO05D009036 7.7e-90 335.1 378 47.9
SMO271G0182 Selaginella moellendorffii HOM05D007058 ORTHO05D009036 1.3e-89 334.3 377 48.3
Mapoly0014s0018 Marchantia polymorpha HOM05D007058 ORTHO05D009036 2.0e-82 310.5 346 48.0
SMO308G0041 Selaginella moellendorffii HOM05D007058 ORTHO05D009036 3.5e-82 309.7 413 43.6
Pp3c1_26880 Physcomitrium patens HOM05D007058 ORTHO05D009036 1.5e-80 304.3 400 42.2
AagrBONN_evm.TU.Sc2ySwM_228.2408 Anthoceros agrestis HOM05D007058 ORTHO05D009036 1.3e-76 291.2 321 50.8
Os01g0516700 Oryza sativa ssp. japonica HOM05D007058 ORTHO05D009036 9.2e-67 258.5 307 47.6
MCO02G081 Micromonas commoda HOM05D007058 ORTHO05D009036 5.1e-65 252.7 404 39.1
Gohir.D07G064300 Gossypium hirsutum HOM05D007058 ORTHO05D009036 4.3e-64 249.6 221 58.8
PRCOL_00000956 Prasinoderma coloniale HOM05D007058 ORTHO05D009036 8.6e-57 225.3 388 39.2
CBR_g74658 Chara braunii HOM05D007058 ORTHO05D009036 2.8e-55 220.3 589 28.4
Glyma.08G049500 Glycine max HOM05D007058 ORTHO05D009036 1.8e-54 217.6 225 52.4
Zm00001eb132130 Zea mays HOM05D007058 ORTHO05D009036 2.7e-42 177.2 252 42.5
Glyma.08G049450 Glycine max HOM05D007058 ORTHO05D009036 3.1e-38 163.7 124 66.1
arahy.Tifrunner.gnm1.ann1.4SU3WD Arachis hypogaea HOM05D007058 ORTHO05D009036 2.0e-37 161.0 135 57.8
CAN.G1074.8 Capsicum annuum HOM05D007058 ORTHO05D009036 1.4e-30 138.3 131 54.2
SalBow5G0499 Salvia bowleyana HOM05D007058 ORTHO05D010040 4.6e-26 123.2 135 48.9
CAN.G169.6 Capsicum annuum HOM05D007058 ORTHO05D009036 1.3e-25 121.7 116 59.5
Cre12.g527950 Chlamydomonas reinhardtii HOM05D007058 ORTHO05D009036 7.4e-24 115.9 386 26.9
AUR62029918 Chenopodium quinoa HOM05D007058 ORTHO05D009036 5.8e-21 106.3 78 67.9
SEGI_28231 Sequoiadendron giganteum HOM05D007058 ORTHO05D009036 5.8e-21 106.3 78 65.4
Ah.11g045170 Amaranthus hybridus HOM05D007058 ORTHO05D009036 1.3e-20 105.1 81 69.1
Gorai.001G067800 Gossypium raimondii HOM05D007058 ORTHO05D009036 4.9e-20 103.2 84 66.7
BcaC08g46795 Brassica carinata HOM05D007058 ORTHO05D009036 2.4e-14 84.3 100 46.0
Rhsim08G0129900 Rhododendron simsii HOM05D007058 ORTHO05D009036 6.5e-12 76.3 51 72.5
arahy.Tifrunner.gnm1.ann1.MMR300 Arachis hypogaea HOM05D007058 ORTHO05D009036 2.5e-11 74.3 65 52.3
CAN.G507.4 Capsicum annuum HOM05D006747 ORTHO05D008384 3.2e-11 73.9 55 60.0
Gohir.D07G064250 Gossypium hirsutum HOM05D007058 ORTHO05D009036 4.2e-11 73.6 65 64.6
Rhsim08G0129800 Rhododendron simsii HOM05D007058 ORTHO05D021411 2.5e-08 64.3 37 86.5


User provided reference genes

Program Settings