Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGR044G0586 Punica granatum HOM05D006020 ORTHO05D007665 1.7e-296 1021.9 512 100.0
Eucgr.K03608 Eucalyptus grandis HOM05D006020 ORTHO05D007665 2.4e-154 549.7 512 56.2
GSVIVG01028621001 Vitis vinifera HOM05D006020 ORTHO05D007665 3.2e-146 522.7 522 56.1
Dinv04657 Davidia involucrata HOM05D006020 ORTHO05D007665 5.4e-146 521.9 521 55.5
Dinv19209 Davidia involucrata HOM05D006020 ORTHO05D007665 1.1e-143 514.2 520 54.0
CiPaw.04G106000 Carya illinoinensis HOM05D006020 ORTHO05D007665 2.0e-140 503.4 520 53.5
TAR365G0939 Trochodendron aralioides HOM05D006020 ORTHO05D007665 1.5e-135 487.3 450 56.0
Duzib133G0822 Durio zibethinus HOM05D006020 ORTHO05D007665 1.9e-135 486.9 526 51.5
Prupe.8G204200 Prunus persica HOM05D006020 ORTHO05D007665 9.6e-135 484.6 519 53.4
RcHm_v2.0_Chr6g0285011 Rosa chinensis HOM05D006020 ORTHO05D007665 6.2e-134 481.9 513 51.9
Thecc.01G227300 Theobroma cacao HOM05D006020 ORTHO05D007665 2.6e-132 476.5 526 52.5
Lj1C84T12 Lonicera japonica HOM05D006020 ORTHO05D007665 5.8e-132 475.3 446 55.8
MD05G1177200 Malus domestica HOM05D006020 ORTHO05D007665 7.6e-132 474.9 518 52.7
Oeu042519.1 Olea europaea HOM05D006020 ORTHO05D007665 7.6e-132 474.9 466 54.9
Actinidia37585 Actinidia chinensis HOM05D006020 ORTHO05D007665 8.4e-131 471.5 522 51.5
Gorai.007G153400 Gossypium raimondii HOM05D006020 ORTHO05D007665 1.1e-130 471.1 529 51.4
FvH4_2g19230 Fragaria vesca HOM05D006020 ORTHO05D007665 1.4e-130 470.7 516 51.0
Gohir.D11G143100 Gossypium hirsutum HOM05D006020 ORTHO05D007665 3.2e-130 469.5 538 51.1
Atru.chr5.2019 Acer truncatum HOM05D006020 ORTHO05D007665 2.7e-129 466.5 523 51.4
Potri.002G241200 Populus trichocarpa HOM05D006020 ORTHO05D007665 3.5e-129 466.1 446 56.3
CANSAT01G2399 Cannabis sativa HOM05D006020 ORTHO05D007665 6.0e-129 465.3 520 49.8
Gohir.A11G136800 Gossypium hirsutum HOM05D006020 ORTHO05D007665 7.9e-129 464.9 529 50.9
FAN27G2268 Fragaria x ananassa HOM05D006020 ORTHO05D007665 1.0e-128 464.5 520 51.3
Migut.N02265 Erythranthe guttata HOM05D006020 ORTHO05D007665 1.3e-128 464.2 446 55.6
Rhsim13G0044300 Rhododendron simsii HOM05D006020 ORTHO05D006855 2.3e-128 463.4 481 52.6
Ciclev10019729m.g Citrus clementina HOM05D006020 ORTHO05D007665 8.7e-128 461.5 526 51.1
TWI75G0236 Tripterygium wilfordii HOM05D006020 ORTHO05D007665 8.7e-128 461.5 488 51.8
Manes.12G041000 Manihot esculenta HOM05D006020 ORTHO05D007665 1.9e-127 460.3 518 50.8
Nn1g07811 Nelumbo nucifera HOM05D006020 ORTHO05D007665 1.9e-127 460.3 528 50.4
Glyma.18G171900 Glycine max HOM05D006020 ORTHO05D007665 7.4e-127 458.4 519 51.3
FAN24G1617 Fragaria x ananassa HOM05D006020 ORTHO05D007665 1.3e-126 457.6 482 52.3
QL04p091507 Quercus lobata HOM05D006020 ORTHO05D007665 1.4e-125 454.1 601 45.4
Sabra02G0183800 Salix brachista HOM05D006020 ORTHO05D007665 3.1e-125 453.0 451 55.2
MSTRG.17550 Avicennia marina HOM05D006020 ORTHO05D007665 1.5e-124 450.7 467 52.2
MBI10_g05712_MAGBIO Magnolia biondii HOM05D006020 ORTHO05D007665 7.6e-124 448.4 445 52.8
Medtr7g058760 Medicago truncatula HOM05D006020 ORTHO05D007665 2.9e-123 446.4 526 48.5
Lj1g0020866 Lotus japonicus HOM05D006020 ORTHO05D007665 1.1e-122 444.5 521 50.7
TPR.G15290 Trifolium pratense HOM05D006020 ORTHO05D007665 1.4e-122 444.1 521 49.3
COL.COLO4_09005 Corchorus olitorius HOM05D006020 ORTHO05D007665 1.2e-121 441.0 578 46.9
Sc05g0002440 Simmondsia chinensis HOM05D006020 ORTHO05D007665 2.1e-121 440.3 477 50.1
Solyc09g061420.3 Solanum lycopersicum HOM05D006020 ORTHO05D007665 2.1e-121 440.3 445 54.6
Lalb_Chr19g0125561 Lupinus albus HOM05D006020 ORTHO05D007665 2.7e-121 439.9 518 48.8
Manes.13G045000 Manihot esculenta HOM05D006020 ORTHO05D007665 4.6e-121 439.1 533 47.7
vmacro02750 Vaccinium macrocarpon HOM05D006020 ORTHO05D007665 4.6e-121 439.1 543 47.7
Cc01_g17190 Coffea canephora HOM05D006020 ORTHO05D007665 6.0e-121 438.7 483 48.2
FAN15G0009 Fragaria x ananassa HOM05D006020 ORTHO05D007665 7.9e-121 438.3 572 46.0
CsaV3_7G025840 Cucumis sativus L. HOM05D006020 ORTHO05D007665 1.5e-119 434.1 505 48.9
Sed0023867 Sechium edule HOM05D006020 ORTHO05D007665 1.5e-119 434.1 473 51.0
Phvul.008G124000 Phaseolus vulgaris HOM05D006020 ORTHO05D007665 5.6e-119 432.2 521 48.8
VMungo1383G1607 Vigna mungo HOM05D006020 ORTHO05D007665 7.4e-119 431.8 521 48.9
Nitab4.5_0002085g0020 Nicotiana tabacum HOM05D006020 ORTHO05D007665 1.4e-117 427.6 441 53.5
ECA236G4144 Erigeron canadensis HOM05D006020 ORTHO05D007665 2.4e-117 426.8 482 48.8
ATR0736G004 Amborella trichopoda HOM05D006020 ORTHO05D007665 1.2e-116 424.5 457 48.1
Nitab4.5_0004922g0030 Nicotiana tabacum HOM05D006020 ORTHO05D007665 2.0e-116 423.7 440 53.0
MELO3C012759.2 Cucumis melo HOM05D006020 ORTHO05D007665 7.6e-116 421.8 483 50.1
A02p37730 Brassica napus HOM05D006020 ORTHO05D007665 1.7e-115 420.6 510 47.3
BraA02t08755Z Brassica rapa HOM05D006020 ORTHO05D007665 3.8e-115 419.5 511 47.6
CAN.G771.64 Capsicum annuum HOM05D006020 ORTHO05D007665 1.4e-114 417.5 437 51.7
Sp2g19230 Schrenkiella parvula HOM05D006020 ORTHO05D007665 4.2e-114 416.0 522 47.1
Nitab4.5_0000045g0010 Nicotiana tabacum HOM05D006020 ORTHO05D007665 2.1e-113 413.7 446 51.6
BolC2t11751H Brassica oleracea HOM05D006020 ORTHO05D007665 1.3e-112 411.0 511 46.2
BcaC03g17676 Brassica carinata HOM05D006020 ORTHO05D007665 1.8e-112 410.6 510 46.5
C02p56820 Brassica napus HOM05D006020 ORTHO05D007665 1.8e-112 410.6 510 46.5
Nitab4.5_0001872g0010 Nicotiana tabacum HOM05D006020 ORTHO05D007665 1.8e-112 410.6 447 51.5
C07p39450 Brassica napus HOM05D006020 ORTHO05D007665 2.3e-112 410.2 475 49.3
Hund05517 Selenicereus undatus HOM05D006020 ORTHO05D007665 2.3e-112 410.2 516 45.2
THA.LOC104818953 Tarenaya hassleriana HOM05D006020 ORTHO05D007665 2.3e-112 410.2 443 49.4
BolC7t44464H Brassica oleracea HOM05D006020 ORTHO05D007665 3.0e-112 409.8 475 49.3
BcaC06g30754 Brassica carinata HOM05D006020 ORTHO05D007665 5.1e-112 409.1 455 50.3
Thhalv10004024m.g Eutrema salsugineum HOM05D006020 ORTHO05D007665 6.7e-112 408.7 464 48.7
Aa31sc866G30 Aethionema arabicum HOM05D006020 ORTHO05D007665 1.1e-111 407.9 441 50.1
HanXRQChr10g0287321 Helianthus annuus HOM05D006020 ORTHO05D007665 1.1e-111 407.9 457 49.0
AT5G48830 Arabidopsis thaliana HOM05D006020 ORTHO05D007665 1.5e-111 407.5 450 50.2
AL8G22000 Arabidopsis lyrata HOM05D006020 ORTHO05D007665 3.3e-111 406.4 443 51.0
Aqoxy5G00068 Aquilegia oxysepala HOM05D006020 ORTHO05D007665 4.3e-111 406.0 443 51.5
Haze_24783 Corylus avellana HOM05D006020 ORTHO05D007665 5.7e-111 405.6 403 54.8
arahy.Tifrunner.gnm1.ann1.PQ4NGV Arachis hypogaea HOM05D006020 ORTHO05D007665 9.6e-111 404.8 469 49.5
A06p38870 Brassica napus HOM05D006020 ORTHO05D007665 2.1e-110 403.7 455 49.0
CARHR182910 Cardamine hirsuta HOM05D006020 ORTHO05D007665 3.7e-110 402.9 452 49.3
Carub.0008s0856 Capsella rubella HOM05D006020 ORTHO05D007665 4.8e-110 402.5 472 48.1
BraA06t26802Z Brassica rapa HOM05D006020 ORTHO05D007665 1.4e-109 401.0 466 48.1
BcaB07g30043 Brassica carinata HOM05D006020 ORTHO05D007665 2.4e-109 400.2 448 49.3
Sopen09g024240 Solanum pennellii HOM05D006020 ORTHO05D007665 2.4e-109 400.2 533 45.4
ClCG09G009100 Citrullus lanatus HOM05D006020 ORTHO05D007665 7.6e-108 395.2 485 47.2
TAR362G0890 Trochodendron aralioides HOM05D006020 ORTHO05D007665 6.5e-107 392.1 353 58.4
SalBow2G1017 Salvia bowleyana HOM05D006020 ORTHO05D007665 8.5e-107 391.7 474 48.5
AUR62031841 Chenopodium quinoa HOM05D006020 ORTHO05D007665 9.3e-106 388.3 527 40.6
Lsat_1_v5_gn_8_90041 Lactuca sativa HOM05D006066 ORTHO05D007720 9.3e-106 388.3 459 49.0
EL10Ac7g17782 Beta vulgaris HOM05D006020 ORTHO05D007665 1.6e-105 387.5 524 42.4
PSO674G0123 Papaver somniferum HOM05D006020 ORTHO05D007665 5.1e-104 382.5 461 47.5
AUR62008869 Chenopodium quinoa HOM05D006020 ORTHO05D007665 1.4e-98 364.4 511 40.5
Glyma.08G355500 Glycine max HOM05D006020 ORTHO05D007665 7.2e-98 362.1 464 45.7
CDE06G1596 Ceratophyllum demersum HOM05D006020 ORTHO05D007665 2.8e-94 350.1 372 49.5
Zm00001eb241910 Zea mays HOM05D006020 ORTHO05D007665 3.6e-89 333.2 452 44.7
PSO170G4604 Papaver somniferum HOM05D006020 ORTHO05D007665 2.6e-87 327.0 420 45.2
Ah.08g213940 Amaranthus hybridus HOM05D006020 ORTHO05D007665 3.3e-87 326.6 381 44.9
MBI19_g27116_MAGBIO Magnolia biondii HOM05D006020 ORTHO05D007665 3.1e-85 320.1 304 54.9
HPP92_017884 Vanilla planifolia HOM05D006020 ORTHO05D007665 9.1e-85 318.5 449 43.0
SEGI_37377 Sequoiadendron giganteum HOM05D006020 ORTHO05D007665 2.9e-75 287.0 441 37.4
Actinidia30087 Actinidia chinensis HOM05D006020 ORTHO05D007665 5.2e-72 276.2 209 67.9
DCAR_018556 Daucus carota HOM05D006066 ORTHO05D007720 4.4e-71 273.1 375 40.5
Peaxi162Scf00107g00133 Petunia axillaris HOM05D006020 ORTHO05D007665 1.5e-66 258.1 443 40.0
SGA_v2.0_scaffold42G16144 Striga asiatica HOM05D006020 ORTHO05D007665 5.7e-63 246.1 315 45.7
arahy.Tifrunner.gnm1.ann1.3CP2KK Arachis hypogaea HOM05D001055 ORTHO05D000867 5.6e-58 229.6 192 62.5
Mapoly0173s0025 Marchantia polymorpha HOM05D006020 ORTHO05D007665 6.8e-56 222.6 454 32.6
MBI01_g07173_MAGBIO Magnolia biondii HOM05D006020 ORTHO05D007665 3.2e-53 213.8 304 40.8
MBI09_g17752_MAGBIO Magnolia biondii HOM05D006020 ORTHO05D007665 8.6e-51 205.7 293 44.0
AagrBONN_evm.TU.Sc2ySwM_344.2296 Anthoceros agrestis HOM05D006020 ORTHO05D007665 1.5e-50 204.9 463 34.1
HPP92_017879 Vanilla planifolia HOM05D006020 ORTHO05D007665 4.3e-50 203.4 333 38.7
Pp3c24_4300 Physcomitrium patens HOM05D006020 ORTHO05D007665 3.1e-48 197.2 467 31.5
Psat3g144000 Pisum sativum HOM05D006020 ORTHO05D007665 8.3e-46 189.1 142 64.8
SEGI_14686 Sequoiadendron giganteum HOM05D006020 ORTHO05D007665 3.5e-44 183.7 232 43.1
SMO115G0313 Selaginella moellendorffii HOM05D006020 ORTHO05D007665 1.7e-43 181.4 447 30.2
FAN15G1634 Fragaria x ananassa HOM05D006020 ORTHO05D007665 9.9e-39 165.6 259 39.0
arahy.Tifrunner.gnm1.ann1.PG1H4F Arachis hypogaea HOM05D006020 ORTHO05D007665 2.1e-36 157.9 310 36.1
unitig_85.g27279 Utricularia gibba HOM05D006020 ORTHO05D007665 4.3e-34 150.2 141 51.8
MBI16_g14987_MAGBIO Magnolia biondii HOM05D006020 ORTHO05D007665 3.6e-33 147.1 125 59.2
Psat3g144040 Pisum sativum HOM05D006020 ORTHO05D007665 5.2e-32 143.3 272 38.2
Cpa.g.sc8.167 Carica papaya HOM05D006020 ORTHO05D007665 1.4e-29 135.2 119 55.5
MBI12_g18650_MAGBIO Magnolia biondii HOM05D006020 ORTHO05D007665 1.2e-25 122.1 158 45.6
CBR_g31943 Chara braunii HOM05D006020 ORTHO05D007665 2.6e-15 87.8 145 37.2
Cpa.g.sc8.168 Carica papaya HOM05D006020 ORTHO05D007665 9.9e-15 85.9 146 38.4
PRCOL_00001532 Prasinoderma coloniale HOM05D006020 ORTHO05D007665 5.4e-13 80.1 237 29.5
MBI12_g40856_MAGBIO Magnolia biondii HOM05D006020 ORTHO05D007665 6.0e-12 76.6 116 38.8
MBI16_g14988_MAGBIO Magnolia biondii HOM05D006020 ORTHO05D007665 1.1e-10 72.4 95 41.1
TAR362G0264 Trochodendron aralioides HOM05D006020 ORTHO05D007665 9.6e-10 69.3 90 44.4
BcaB07g30044 Brassica carinata HOM05D006020 ORTHO05D007665 1.4e-08 65.5 50 60.0
MCO16G349 Micromonas commoda HOM05D006020 ORTHO05D007665 3.1e-08 64.3 63 46.0


User provided reference genes

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