Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGR044G0517 Punica granatum HOM05D007479 ORTHO05D009416 2.8e-100 368.6 186 100.0
Cfa006037 Carpinus fangiana HOM05D007479 ORTHO05D009416 4.7e-47 191.8 166 64.5
GSVIVG01011009001 Vitis vinifera HOM05D007479 ORTHO05D009416 2.3e-46 189.5 116 79.3
ClCG09G006510 Citrullus lanatus HOM05D007479 ORTHO05D009416 5.2e-46 188.3 114 78.1
MELO3C015894.2 Cucumis melo HOM05D007479 ORTHO05D009416 6.7e-46 188.0 114 78.9
QL12p023941 Quercus lobata HOM05D007479 ORTHO05D009416 8.8e-46 187.6 125 75.2
Sed0025615 Sechium edule HOM05D007479 ORTHO05D009416 3.3e-45 185.7 114 77.2
CsaV3_7G028280 Cucumis sativus L. HOM05D007479 ORTHO05D009416 5.7e-45 184.9 114 77.2
Manes.01G213600 Manihot esculenta HOM05D007479 ORTHO05D009416 5.7e-45 184.9 120 75.0
CiPaw.07G099900 Carya illinoinensis HOM05D007479 ORTHO05D009416 7.4e-45 184.5 112 78.6
Eucgr.K03432 Eucalyptus grandis HOM05D007479 ORTHO05D009416 1.3e-44 183.7 116 78.4
Duzib133G1271 Durio zibethinus HOM05D007479 ORTHO05D009416 4.8e-44 181.8 115 74.8
FvH4_2g24710 Fragaria vesca HOM05D007479 ORTHO05D009416 1.1e-43 180.6 120 75.0
FAN20G0962 Fragaria x ananassa HOM05D007479 ORTHO05D009416 1.1e-43 180.6 120 75.0
FAN24G3263 Fragaria x ananassa HOM05D000112 ORTHO05D000564 1.1e-43 180.6 120 75.0
Thecc.01G290200 Theobroma cacao HOM05D007479 ORTHO05D009416 1.4e-43 180.3 144 67.4
TWI59G0977 Tripterygium wilfordii HOM05D007479 ORTHO05D009416 1.8e-43 179.9 134 67.9
TWI59G1446 Tripterygium wilfordii HOM05D007479 ORTHO05D009416 1.8e-43 179.9 134 67.9
Haze_04810 Corylus avellana HOM05D007479 ORTHO05D009416 2.4e-43 179.5 183 57.9
Gohir.D08G080200 Gossypium hirsutum HOM05D007479 ORTHO05D009416 2.4e-43 179.5 130 70.8
Gorai.004G085300 Gossypium raimondii HOM05D007479 ORTHO05D009416 2.4e-43 179.5 130 70.8
Gohir.A08G072000 Gossypium hirsutum HOM05D007479 ORTHO05D009416 3.1e-43 179.1 120 73.3
TAR362G0341 Trochodendron aralioides HOM05D007479 ORTHO05D009416 3.1e-43 179.1 140 64.3
Ciclev10022531m.g Citrus clementina HOM05D007479 ORTHO05D009416 5.3e-43 178.3 166 63.3
COL.COLO4_08032 Corchorus olitorius HOM05D007479 ORTHO05D009416 5.3e-43 178.3 122 73.0
Phvul.001G201900 Phaseolus vulgaris HOM05D007479 ORTHO05D009416 5.3e-43 178.3 126 65.9
CSS0010600 Camellia sinensis var. sinensis HOM05D007479 ORTHO05D009416 7.0e-43 177.9 147 63.9
CSS0014944 Camellia sinensis var. sinensis HOM05D007479 ORTHO05D009416 7.0e-43 177.9 147 63.9
FAN27G0664 Fragaria x ananassa HOM05D007479 ORTHO05D009416 9.1e-43 177.6 120 73.3
RcHm_v2.0_Chr6g0292541 Rosa chinensis HOM05D007479 ORTHO05D009416 9.1e-43 177.6 113 76.1
MD00G1056400 Malus domestica HOM05D007479 ORTHO05D009416 1.6e-42 176.8 129 70.5
VMungo1383G0484 Vigna mungo HOM05D007479 ORTHO05D009416 1.6e-42 176.8 126 65.1
Atru.chr5.1282 Acer truncatum HOM05D007479 ORTHO05D009416 3.5e-42 175.6 152 60.5
Hma1.2p1_0209F.1_g089100 Hydrangea macrophylla HOM05D007479 ORTHO05D009416 4.5e-42 175.3 122 73.0
CANSAT25G0138 Cannabis sativa HOM05D007479 ORTHO05D009416 1.7e-41 173.3 165 56.4
Glyma.19G206000 Glycine max HOM05D007479 ORTHO05D009416 1.7e-41 173.3 169 53.8
Prupe.8G252200 Prunus persica HOM05D007479 ORTHO05D009416 2.2e-41 172.9 150 60.7
Cc01_g20220 Coffea canephora HOM05D007479 ORTHO05D009416 2.9e-41 172.6 121 70.2
Lj1g0024237 Lotus japonicus HOM05D007479 ORTHO05D009416 3.8e-41 172.2 116 69.8
EL10Ac7g17366 Beta vulgaris HOM05D007479 ORTHO05D009416 5.0e-41 171.8 113 73.5
Cpa.g.sc9.160 Carica papaya HOM05D007479 ORTHO05D009416 5.0e-41 171.8 117 73.5
Peaxi162Scf01039g00126 Petunia axillaris HOM05D007479 ORTHO05D009416 5.0e-41 171.8 116 70.7
arahy.Tifrunner.gnm1.ann1.5G1G6M Arachis hypogaea HOM05D007479 ORTHO05D009416 6.5e-41 171.4 160 57.5
Ca_09112_v3 Cicer arietinum L. HOM05D000335 ORTHO05D001251 6.5e-41 171.4 116 70.7
Actinidia00698 Actinidia chinensis HOM05D007479 ORTHO05D009416 8.5e-41 171.0 149 61.7
DCAR_002787 Daucus carota HOM05D007479 ORTHO05D009416 8.5e-41 171.0 111 73.9
MSTRG.12593 Avicennia marina HOM05D007479 ORTHO05D009416 1.1e-40 170.6 108 77.8
CARHR251580 Cardamine hirsuta HOM05D007479 ORTHO05D009416 1.1e-40 170.6 109 71.6
Sopen06g035860 Solanum pennellii HOM05D007479 ORTHO05D009416 1.1e-40 170.6 120 67.5
Aqoxy2G03133 Aquilegia oxysepala HOM05D007479 ORTHO05D009416 2.5e-40 169.5 166 56.0
Solyc06g084470.4 Solanum lycopersicum HOM05D007479 ORTHO05D009416 2.5e-40 169.5 120 66.7
Oeu047908.1 Olea europaea HOM05D007479 ORTHO05D009416 3.2e-40 169.1 114 71.1
CSS0048836 Camellia sinensis var. sinensis HOM05D007479 ORTHO05D009416 4.2e-40 168.7 147 61.2
AUR62036657 Chenopodium quinoa HOM05D007479 ORTHO05D009416 4.2e-40 168.7 123 66.7
Thhalv10029006m.g Eutrema salsugineum HOM05D007479 ORTHO05D009416 7.2e-40 167.9 115 67.0
MBI19_g32765_MAGBIO Magnolia biondii HOM05D007479 ORTHO05D009416 9.4e-40 167.5 144 61.1
Nitab4.5_0004150g0020 Nicotiana tabacum HOM05D007479 ORTHO05D009416 9.4e-40 167.5 113 72.6
Sabra14G0101000 Salix brachista HOM05D007479 ORTHO05D009416 9.4e-40 167.5 102 77.5
SGA_v2.0_scaffold172G39060 Striga asiatica HOM05D007479 ORTHO05D009416 9.4e-40 167.5 111 73.0
Lalb_Chr18g0047491 Lupinus albus HOM05D007479 ORTHO05D009416 1.2e-39 167.2 155 57.4
Nitab4.5_0002093g0220 Nicotiana tabacum HOM05D007479 ORTHO05D009416 1.2e-39 167.2 113 71.7
AT4G03150 Arabidopsis thaliana HOM05D007479 ORTHO05D009416 1.6e-39 166.8 109 69.7
PSO210G3923 Papaver somniferum HOM05D007479 ORTHO05D009416 2.7e-39 166.0 170 54.1
BcaB01g01976 Brassica carinata HOM05D007479 ORTHO05D009416 3.6e-39 165.6 161 54.0
ECA236G2582 Erigeron canadensis HOM05D007479 ORTHO05D009416 4.7e-39 165.2 161 57.1
Sc17g0003550 Simmondsia chinensis HOM05D007479 ORTHO05D009416 4.7e-39 165.2 122 67.2
Carub.0006s3390 Capsella rubella HOM05D007479 ORTHO05D009416 6.1e-39 164.9 125 63.2
Lsat_1_v5_gn_8_55221 Lactuca sativa HOM05D007479 ORTHO05D009416 6.1e-39 164.9 120 67.5
Rhsim13G0017200 Rhododendron simsii HOM05D007479 ORTHO05D009416 6.1e-39 164.9 102 75.5
AL6G49780 Arabidopsis lyrata HOM05D007479 ORTHO05D009416 1.0e-38 164.1 139 61.2
Sp6g03190 Schrenkiella parvula HOM05D007479 ORTHO05D009416 1.0e-38 164.1 109 69.7
PGSC0003DMG400024042 Solanum tuberosum HOM05D007479 ORTHO05D009416 1.0e-38 164.1 120 65.8
HanXRQChr11g0350171 Helianthus annuus HOM05D007479 ORTHO05D009416 1.4e-38 163.7 124 63.7
Nn3g21272 Nelumbo nucifera HOM05D007479 ORTHO05D009416 2.3e-38 162.9 104 74.0
C09p02570 Brassica napus HOM05D007479 ORTHO05D009416 3.0e-38 162.5 108 67.6
BolC9t53187H Brassica oleracea HOM05D007479 ORTHO05D009416 3.0e-38 162.5 152 55.9
HPP92_010636 Vanilla planifolia HOM05D007479 ORTHO05D009416 3.0e-38 162.5 163 56.4
Psat3g024840 Pisum sativum HOM05D007479 ORTHO05D009416 5.2e-38 161.8 104 71.2
A09p02470 Brassica napus HOM05D007479 ORTHO05D009416 6.7e-38 161.4 134 59.7
BraA09t35894Z Brassica rapa HOM05D007479 ORTHO05D009416 6.7e-38 161.4 134 59.7
Migut.N01396 Erythranthe guttata HOM05D007479 ORTHO05D009416 8.8e-38 161.0 104 72.1
TPR.G32316 Trifolium pratense HOM05D007479 ORTHO05D009416 8.8e-38 161.0 105 69.5
Medtr7g107680 Medicago truncatula HOM05D007479 ORTHO05D009416 2.0e-37 159.8 110 65.5
THA.LOC104826012 Tarenaya hassleriana HOM05D007479 ORTHO05D009416 3.3e-37 159.1 119 66.4
Hund18029 Selenicereus undatus HOM05D007479 ORTHO05D009416 4.4e-37 158.7 111 66.7
Potri.014G135400 Populus trichocarpa HOM05D007479 ORTHO05D009416 1.7e-36 156.8 173 53.8
SalBow6G0786 Salvia bowleyana HOM05D007479 ORTHO05D009416 1.7e-36 156.8 111 69.4
unitig_21.g20281 Utricularia gibba HOM05D007479 ORTHO05D009416 2.8e-36 156.0 111 68.5
PSO572G0003 Papaver somniferum HOM05D007479 ORTHO05D009416 4.8e-36 155.2 170 51.8
PSO832G0938 Papaver somniferum HOM05D007479 ORTHO05D009416 4.8e-36 155.2 170 51.8
PSO832G2794 Papaver somniferum HOM05D007479 ORTHO05D009416 4.8e-36 155.2 170 51.8
Hma1.2p1_0209F.1_g089110 Hydrangea macrophylla HOM05D007479 ORTHO05D009416 5.3e-35 151.8 87 82.8
CDE09G0484 Ceratophyllum demersum HOM05D007479 ORTHO05D009416 1.2e-34 150.6 109 65.1
Lj2P1185T15 Lonicera japonica HOM05D007479 ORTHO05D009416 1.2e-34 150.6 87 81.6
AUR62034613 Chenopodium quinoa HOM05D007479 ORTHO05D009416 2.7e-34 149.4 92 78.3
ATR0706G261 Amborella trichopoda HOM05D001702 ORTHO05D001791 1.7e-33 146.7 106 61.3
Os12g0534100 Oryza sativa ssp. japonica HOM05D007479 ORTHO05D009416 3.2e-32 142.5 105 61.9
vmacro02508 Vaccinium macrocarpon HOM05D007479 ORTHO05D009416 4.2e-32 142.1 89 74.2
SalBow8G4180 Salvia bowleyana HOM05D007479 ORTHO05D009416 6.1e-31 138.3 85 78.8
AagrBONN_evm.TU.Sc2ySwM_368.764 Anthoceros agrestis HOM05D007479 ORTHO05D009416 6.8e-30 134.8 109 54.1
Mapoly0029s0155 Marchantia polymorpha HOM05D007479 ORTHO05D009416 1.3e-28 130.6 182 39.6
Mapoly0275s0001 Marchantia polymorpha HOM05D007479 ORTHO05D009416 1.3e-28 130.6 182 39.6
Pp3c5_13320 Physcomitrium patens HOM05D007479 ORTHO05D009416 1.8e-27 126.7 106 52.8
CBR_g22325 Chara braunii HOM05D007479 ORTHO05D009416 1.9e-24 116.7 111 51.4
Dinv32992 Davidia involucrata HOM05D007479 ORTHO05D009416 4.1e-11 72.4 54 63.0


User provided reference genes

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