Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGR044G0473 Punica granatum HOM05D006563 ORTHO05D008154 2.6e-115 418.7 208 100.0
CiPaw.11G007100 Carya illinoinensis HOM05D006563 ORTHO05D008154 1.0e-90 337.0 208 80.8
Prupe.5G150900 Prunus persica HOM05D006563 ORTHO05D008154 9.4e-89 330.5 226 73.5
FAN04G0682 Fragaria x ananassa HOM05D006563 ORTHO05D008154 2.1e-88 329.3 226 72.6
Atru.chr6.1794 Acer truncatum HOM05D006563 ORTHO05D008154 8.0e-88 327.4 226 73.5
Dinv23146 Davidia involucrata HOM05D006563 ORTHO05D008154 8.0e-88 327.4 224 73.7
MD14G1156900 Malus domestica HOM05D006563 ORTHO05D008154 8.0e-88 327.4 226 73.0
FAN18G2834 Fragaria x ananassa HOM05D006563 ORTHO05D008154 1.0e-87 327.0 226 71.7
FvH4_5g08340 Fragaria vesca HOM05D006563 ORTHO05D008154 5.2e-87 324.7 226 71.2
FAN04G3009 Fragaria x ananassa HOM05D006563 ORTHO05D008154 5.2e-87 324.7 226 71.7
FAN13G1867 Fragaria x ananassa HOM05D006563 ORTHO05D008154 5.2e-87 324.7 226 71.7
TAR374G0821 Trochodendron aralioides HOM05D006563 ORTHO05D008154 1.1e-86 323.6 224 73.2
RcHm_v2.0_Chr7g0190121 Rosa chinensis HOM05D006563 ORTHO05D008154 1.5e-86 323.2 226 71.7
GSVIVG01008544001 Vitis vinifera HOM05D006563 ORTHO05D008154 9.7e-86 320.5 228 72.4
Cpa.g.sc13.115 Carica papaya HOM05D006563 ORTHO05D008154 4.8e-85 318.2 227 71.4
Potri.015G096400 Populus trichocarpa HOM05D006563 ORTHO05D008154 3.1e-84 315.5 230 71.7
Ciclev10032657m.g Citrus clementina HOM05D006563 ORTHO05D008154 5.3e-84 314.7 228 73.2
Thecc.03G129300 Theobroma cacao HOM05D006563 ORTHO05D008154 5.3e-84 314.7 226 71.2
ClCG03G003770 Citrullus lanatus HOM05D006563 ORTHO05D008154 7.0e-84 314.3 225 71.6
MELO3C002362.2 Cucumis melo HOM05D006563 ORTHO05D008154 7.0e-84 314.3 225 71.6
Carub.0005s1473 Capsella rubella HOM05D006563 ORTHO05D008154 1.2e-83 313.5 224 71.4
Duzib205G1898 Durio zibethinus HOM05D006563 ORTHO05D008154 1.6e-83 313.2 226 69.5
AT3G48540 Arabidopsis thaliana HOM05D006563 ORTHO05D008154 2.0e-83 312.8 225 72.0
CANSAT80G0303 Cannabis sativa HOM05D006563 ORTHO05D008154 4.5e-83 311.6 228 71.1
TWI39G0919 Tripterygium wilfordii HOM05D006563 ORTHO05D008154 5.9e-83 311.2 224 72.3
CsaV3_1G009660 Cucumis sativus L. HOM05D006563 ORTHO05D008154 1.3e-82 310.1 225 71.1
Sp5g13440 Schrenkiella parvula HOM05D006563 ORTHO05D008154 2.9e-82 308.9 223 70.4
Thhalv10010696m.g Eutrema salsugineum HOM05D006563 ORTHO05D008154 3.8e-82 308.5 225 69.3
Gorai.008G206400 Gossypium raimondii HOM05D006563 ORTHO05D008154 3.8e-82 308.5 222 70.7
Lj4g0002806 Lotus japonicus HOM05D006563 ORTHO05D008154 3.8e-82 308.5 224 69.6
Manes.06G119700 Manihot esculenta HOM05D006563 ORTHO05D008154 3.8e-82 308.5 226 69.5
Gohir.D12G192100 Gossypium hirsutum HOM05D006563 ORTHO05D008154 5.0e-82 308.1 222 70.7
QL10p002894 Quercus lobata HOM05D006563 ORTHO05D008154 5.0e-82 308.1 251 64.9
Aa31LG4G17160 Aethionema arabicum HOM05D006563 ORTHO05D008154 6.5e-82 307.8 228 69.3
AL5G27990 Arabidopsis lyrata HOM05D006563 ORTHO05D008154 6.5e-82 307.8 225 71.1
COL.COLO4_28130 Corchorus olitorius HOM05D006563 ORTHO05D008154 8.5e-82 307.4 226 70.4
Hma1.2p1_0426F.1_g150610 Hydrangea macrophylla HOM05D006563 ORTHO05D008154 8.5e-82 307.4 226 70.4
Peaxi162Scf00089g00627 Petunia axillaris HOM05D006563 ORTHO05D008154 8.5e-82 307.4 225 70.2
Gohir.A12G189700 Gossypium hirsutum HOM05D006563 ORTHO05D008154 1.9e-81 306.2 222 69.8
A01p25680 Brassica napus HOM05D006563 ORTHO05D008154 3.2e-81 305.4 223 69.1
BraA01t02447Z Brassica rapa HOM05D006563 ORTHO05D008154 3.2e-81 305.4 223 69.1
Solyc03g111350.3 Solanum lycopersicum HOM05D006563 ORTHO05D008154 3.2e-81 305.4 226 72.6
BcaC09g49875 Brassica carinata HOM05D006563 ORTHO05D008154 4.2e-81 305.1 223 69.1
C01p32250 Brassica napus HOM05D006563 ORTHO05D008154 4.2e-81 305.1 223 69.1
Nitab4.5_0004750g0020 Nicotiana tabacum HOM05D006563 ORTHO05D008154 5.5e-81 304.7 227 71.8
Nitab4.5_0003282g0060 Nicotiana tabacum HOM05D006563 ORTHO05D008154 7.2e-81 304.3 224 70.5
BcaB05g23009 Brassica carinata HOM05D006563 ORTHO05D008154 9.4e-81 303.9 223 68.6
BolC1t03129H Brassica oleracea HOM05D006563 ORTHO05D008154 1.2e-80 303.5 223 69.1
CSS0042372 Camellia sinensis var. sinensis HOM05D006563 ORTHO05D008154 1.2e-80 303.5 226 68.6
Rhsim12G0174600 Rhododendron simsii HOM05D006563 ORTHO05D008154 1.2e-80 303.5 233 67.4
CAN.G352.13 Capsicum annuum HOM05D006563 ORTHO05D008154 2.7e-80 302.4 230 70.4
CARHR157340 Cardamine hirsuta HOM05D006563 ORTHO05D008154 2.7e-80 302.4 224 68.3
Sc04g0000640 Simmondsia chinensis HOM05D006563 ORTHO05D008154 3.6e-80 302.0 226 69.0
Sopen03g030480 Solanum pennellii HOM05D006563 ORTHO05D008154 3.6e-80 302.0 226 71.7
Nn4g22315 Nelumbo nucifera HOM05D006563 ORTHO05D008154 6.1e-80 301.2 211 72.5
Potri.012G097800 Populus trichocarpa HOM05D006563 ORTHO05D008154 1.0e-79 300.4 208 73.1
Migut.D01965 Erythranthe guttata HOM05D006563 ORTHO05D008154 1.8e-79 299.7 225 68.4
Hund02442 Selenicereus undatus HOM05D006563 ORTHO05D008154 3.0e-79 298.9 224 68.8
PGSC0003DMG400015182 Solanum tuberosum HOM05D006563 ORTHO05D008154 3.0e-79 298.9 226 70.8
SGA_v2.0_scaffold7G04149 Striga asiatica HOM05D006563 ORTHO05D008154 6.7e-79 297.7 228 67.5
Actinidia08872 Actinidia chinensis HOM05D006563 ORTHO05D008154 1.5e-78 296.6 224 67.4
SalBow6G4201 Salvia bowleyana HOM05D006563 ORTHO05D008154 1.5e-78 296.6 224 68.3
SalBow6G4357 Salvia bowleyana HOM05D006563 ORTHO05D008154 1.5e-78 296.6 224 68.3
Ca_26101_v3 Cicer arietinum L. HOM05D006563 ORTHO05D008154 2.6e-78 295.8 224 68.8
Phvul.003G211300 Phaseolus vulgaris HOM05D006563 ORTHO05D008154 3.3e-78 295.4 224 67.9
Eucgr.B00111 Eucalyptus grandis HOM05D006563 ORTHO05D008154 4.4e-78 295.0 236 65.7
Aqoxy5G03376 Aquilegia oxysepala HOM05D006563 ORTHO05D008154 9.7e-78 293.9 235 64.7
Sed0017169 Sechium edule HOM05D006563 ORTHO05D008154 1.7e-77 293.1 226 69.0
FAN08G2924 Fragaria x ananassa HOM05D006563 ORTHO05D008154 2.8e-77 292.4 247 62.3
Medtr4g103300 Medicago truncatula HOM05D006563 ORTHO05D008154 3.7e-77 292.0 232 65.9
MSTRG.9682 Avicennia marina HOM05D006563 ORTHO05D008154 8.2e-77 290.8 226 66.4
Sabra15G0117200 Salix brachista HOM05D006563 ORTHO05D008154 5.3e-76 288.1 210 71.0
Oeu036009.4 Olea europaea HOM05D006563 ORTHO05D008154 7.0e-76 287.7 225 65.8
HanXRQChr13g0408701 Helianthus annuus HOM05D006563 ORTHO05D008154 9.1e-76 287.3 224 67.0
Psat4g066200 Pisum sativum HOM05D006563 ORTHO05D008154 2.7e-75 285.8 223 66.8
Glyma.05G048400 Glycine max HOM05D006563 ORTHO05D008154 5.9e-75 284.6 208 71.2
AUR62029612 Chenopodium quinoa HOM05D006563 ORTHO05D008154 7.7e-75 284.3 210 69.5
Cc09_g04000 Coffea canephora HOM05D006563 ORTHO05D008154 1.7e-74 283.1 246 61.8
HPP92_025255 Vanilla planifolia HOM05D006563 ORTHO05D008154 6.5e-74 281.2 228 65.8
Os01g0765000 Oryza sativa ssp. japonica HOM05D006563 ORTHO05D008154 4.2e-73 278.5 232 63.4
ATR0561G278 Amborella trichopoda HOM05D006563 ORTHO05D008154 9.4e-73 277.3 209 67.0
MBI07_g16949_MAGBIO Magnolia biondii HOM05D006563 ORTHO05D008154 1.2e-72 276.9 224 63.4
EL10Ac5g11412 Beta vulgaris HOM05D006563 ORTHO05D008154 1.6e-72 276.6 210 69.5
PSO017G5417 Papaver somniferum HOM05D006563 ORTHO05D008154 3.6e-72 275.4 228 64.0
Oeu040847.2 Olea europaea HOM05D006563 ORTHO05D008154 2.3e-71 272.7 260 57.7
Lsat_1_v5_gn_1_28920 Lactuca sativa HOM05D006563 ORTHO05D008154 3.0e-71 272.3 222 62.6
AUR62034825 Chenopodium quinoa HOM05D006563 ORTHO05D008154 1.5e-70 270.0 210 67.1
unitig_46.g18474 Utricularia gibba HOM05D006563 ORTHO05D008154 5.7e-70 268.1 229 64.2
CDE05G1358 Ceratophyllum demersum HOM05D006563 ORTHO05D008154 2.2e-69 266.2 208 65.4
Medtr4g057655 Medicago truncatula HOM05D006563 ORTHO05D008154 1.1e-68 263.8 208 66.3
arahy.Tifrunner.gnm1.ann1.G9M8TR Arachis hypogaea HOM05D006563 ORTHO05D008154 1.2e-67 260.4 210 64.8
Medtr4g071665 Medicago truncatula HOM05D006563 ORTHO05D008154 1.6e-67 260.0 208 65.9
PSO478G0702 Papaver somniferum HOM05D006563 ORTHO05D008154 4.5e-67 258.5 212 65.6
VMungo1215G3263 Vigna mungo HOM05D006563 ORTHO05D008154 4.0e-63 245.4 155 78.1
Ah.11g044830 Amaranthus hybridus HOM05D006563 ORTHO05D008154 1.5e-62 243.4 208 63.0
arahy.Tifrunner.gnm1.ann1.76974R Arachis hypogaea HOM05D006563 ORTHO05D008154 1.5e-62 243.4 235 57.9
Haze_07139 Corylus avellana HOM05D006563 ORTHO05D008154 8.3e-61 237.7 208 63.0
SEGI_38890 Sequoiadendron giganteum HOM05D006563 ORTHO05D008154 1.8e-60 236.5 247 53.4
Lalb_Chr13g0297241 Lupinus albus HOM05D006563 ORTHO05D008154 5.9e-59 231.5 155 72.9
TPR.G19207 Trifolium pratense HOM05D006563 ORTHO05D008154 5.6e-57 224.9 152 73.0
Pp3c2_32260 Physcomitrium patens HOM05D006563 ORTHO05D008154 7.3e-57 224.6 176 61.4
Zm00001eb370270 Zea mays HOM05D006563 ORTHO05D008154 7.3e-57 224.6 213 58.7
DCAR_016389 Daucus carota HOM05D006563 ORTHO05D008154 8.9e-55 217.6 236 52.5
AagrBONN_evm.TU.Sc2ySwM_228.2386 Anthoceros agrestis HOM05D006563 ORTHO05D008154 3.4e-54 215.7 177 60.5
Sc04g0000170 Simmondsia chinensis HOM05D006563 ORTHO05D008154 1.7e-53 213.4 214 57.9
vmacro16718 Vaccinium macrocarpon HOM05D006563 ORTHO05D008154 1.2e-51 207.2 330 40.9
SMO116G0330 Selaginella moellendorffii HOM05D006563 ORTHO05D008154 2.5e-49 199.5 148 66.9
Lj5A96G46 Lonicera japonica HOM05D006563 ORTHO05D008154 2.2e-45 186.4 145 69.7
PRCOL_00002657 Prasinoderma coloniale HOM05D006563 ORTHO05D008154 3.2e-44 182.6 161 55.3
Cc09_g03990 Coffea canephora HOM05D006563 ORTHO05D008154 3.9e-42 175.6 123 69.9
MCO04G397 Micromonas commoda HOM05D006563 ORTHO05D008154 1.4e-39 167.2 135 57.8
Cre19.g750897 Chlamydomonas reinhardtii HOM05D006563 ORTHO05D008154 5.6e-33 145.2 123 59.3
AL1G65740 Arabidopsis lyrata HOM05D006563 ORTHO05D008154 6.4e-29 131.7 63 93.7
Haze_26466 Corylus avellana HOM05D006563 ORTHO05D008154 1.6e-27 127.1 159 42.8
CBR_g19095 Chara braunii HOM05D006563 ORTHO05D008154 2.1e-24 116.7 134 46.3
Hma1.2p1_0426F.1_g150600 Hydrangea macrophylla HOM05D006563 ORTHO05D008154 5.3e-23 112.1 89 64.0
SEGI_22016 Sequoiadendron giganteum HOM05D006563 ORTHO05D008154 1.1e-17 94.4 126 44.4
SMO361G0344 Selaginella moellendorffii HOM05D006563 ORTHO05D008154 1.3e-13 80.9 45 75.6
MD06G1141700 Malus domestica HOM05D006563 ORTHO05D008154 2.9e-13 79.7 126 41.3
Hma1.2p1_0426F.1_g150620 Hydrangea macrophylla HOM05D006563 ORTHO05D008154 1.2e-11 74.3 50 76.0
SMO199G0092 Selaginella moellendorffii HOM05D006563 ORTHO05D008154 5.1e-10 68.9 86 44.2


User provided reference genes

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