Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGR044G0377 Punica granatum HOM05D005884 ORTHO05D007282 2.4e-97 359.0 199 100.0
QL02p021928 Quercus lobata HOM05D005884 ORTHO05D007282 3.2e-38 162.5 160 63.8
Thecc.01G227600 Theobroma cacao HOM05D005884 ORTHO05D007282 3.2e-38 162.5 171 60.2
Eucgr.H00802 Eucalyptus grandis HOM05D005884 ORTHO05D007282 1.8e-36 156.8 184 57.1
CiPaw.03G150900 Carya illinoinensis HOM05D005884 ORTHO05D007282 3.0e-36 156.0 184 54.3
Duzib133G0404 Durio zibethinus HOM05D005884 ORTHO05D007282 8.8e-36 154.5 141 64.5
Ciclev10022209m.g Citrus clementina HOM05D005884 ORTHO05D007282 2.6e-35 152.9 173 58.4
CSS0032503 Camellia sinensis var. sinensis HOM05D005884 ORTHO05D007282 9.8e-35 151.0 113 71.7
GSVIVG01028583001 Vitis vinifera HOM05D005884 ORTHO05D007282 9.8e-35 151.0 140 65.7
Potri.002G241000 Populus trichocarpa HOM05D005884 ORTHO05D007282 1.7e-34 150.2 182 53.8
CSS0024949 Camellia sinensis var. sinensis HOM05D005884 ORTHO05D007282 2.8e-34 149.4 113 70.8
Duzib138G0327 Durio zibethinus HOM05D005884 ORTHO05D007282 6.3e-34 148.3 173 55.5
ECA248G2691 Erigeron canadensis HOM05D005884 ORTHO05D007282 6.3e-34 148.3 101 75.2
Peaxi162Scf00107g01314 Petunia axillaris HOM05D005884 ORTHO05D007282 8.3e-34 147.9 102 76.5
COL.COLO4_10043 Corchorus olitorius HOM05D003123 ORTHO05D007282 1.1e-33 147.5 161 58.4
Dinv04661 Davidia involucrata HOM05D005884 ORTHO05D007282 1.4e-33 147.1 120 68.3
Manes.13G044700 Manihot esculenta HOM05D005884 ORTHO05D007282 9.1e-33 144.4 178 50.0
CiPaw.04G106200 Carya illinoinensis HOM05D005884 ORTHO05D007282 1.2e-32 144.1 174 56.3
Cc03_g12390 Coffea canephora HOM05D005884 ORTHO05D007282 1.6e-32 143.7 194 50.0
TWI36G0226 Tripterygium wilfordii HOM05D005884 ORTHO05D007282 1.6e-32 143.7 169 57.4
Manes.12G041200 Manihot esculenta HOM05D005884 ORTHO05D007282 2.0e-32 143.3 162 54.9
HanXRQChr01g0014641 Helianthus annuus HOM05D005884 ORTHO05D007282 2.7e-32 142.9 166 56.0
Nitab4.5_0000866g0050 Nicotiana tabacum HOM05D005884 ORTHO05D007282 2.7e-32 142.9 188 52.7
Actinidia23729 Actinidia chinensis HOM05D005884 ORTHO05D007282 3.5e-32 142.5 135 63.0
Lj3g0000124 Lotus japonicus HOM05D005884 ORTHO05D007282 4.5e-32 142.1 206 51.9
Sabra02G0183600 Salix brachista HOM05D005884 ORTHO05D007282 4.5e-32 142.1 181 50.3
Gohir.A07G156200 Gossypium hirsutum HOM05D005884 ORTHO05D007282 5.9e-32 141.7 131 61.8
Hma1.2p1_0351F.1_g132860 Hydrangea macrophylla HOM05D005884 ORTHO05D007282 7.7e-32 141.4 138 61.6
Phvul.010G014200 Phaseolus vulgaris HOM05D005884 ORTHO05D007282 2.9e-31 139.4 151 57.6
Gorai.001G186100 Gossypium raimondii HOM05D005884 ORTHO05D007282 3.8e-31 139.0 177 54.8
Nn1g07794 Nelumbo nucifera HOM05D005884 ORTHO05D007282 3.8e-31 139.0 137 61.3
Nitab4.5_0003790g0020 Nicotiana tabacum HOM05D005884 ORTHO05D007282 3.8e-31 139.0 183 51.9
TWI18G1166 Tripterygium wilfordii HOM05D005884 ORTHO05D007282 3.8e-31 139.0 136 63.2
Gohir.D07G162500 Gossypium hirsutum HOM05D005884 ORTHO05D007282 1.1e-30 137.5 194 52.1
Lalb_Chr07g0194041 Lupinus albus HOM05D005884 ORTHO05D007282 1.5e-30 137.1 144 61.1
Psat7g243200 Pisum sativum HOM05D005884 ORTHO05D007282 1.5e-30 137.1 172 56.4
Dinv19212 Davidia involucrata HOM05D005884 ORTHO05D007282 1.9e-30 136.7 147 57.1
Cpa.g.sc8.170 Carica papaya HOM05D005884 ORTHO05D007282 2.5e-30 136.3 147 60.5
Oeu015899.1 Olea europaea HOM05D005884 ORTHO05D007282 2.5e-30 136.3 137 57.7
Rhsim01G0257200 Rhododendron simsii HOM05D005884 ORTHO05D007282 3.2e-30 136.0 168 53.0
TAR362G0919 Trochodendron aralioides HOM05D005884 ORTHO05D007282 5.5e-30 135.2 145 59.3
Ca_20129_v3 Cicer arietinum L. HOM05D005884 ORTHO05D007282 7.2e-30 134.8 140 64.3
Aqoxy2G03761 Aquilegia oxysepala HOM05D005884 ORTHO05D007282 9.5e-30 134.4 137 56.9
arahy.Tifrunner.gnm1.ann1.Q3DN0U Arachis hypogaea HOM05D005884 ORTHO05D007282 9.5e-30 134.4 176 56.2
Lsat_1_v5_gn_5_179880 Lactuca sativa HOM05D005884 ORTHO05D007282 2.1e-29 133.3 128 62.5
Sc05g0002430 Simmondsia chinensis HOM05D005884 ORTHO05D007282 2.8e-29 132.9 148 58.1
DCAR_018555 Daucus carota HOM05D005884 ORTHO05D007282 6.1e-29 131.7 140 57.1
MD05G1177500 Malus domestica HOM05D005884 ORTHO05D007282 8.0e-29 131.3 156 53.8
Migut.D00525 Erythranthe guttata HOM05D005884 ORTHO05D007282 1.0e-28 131.0 158 57.0
vmacro14762 Vaccinium macrocarpon HOM05D005884 ORTHO05D007282 1.0e-28 131.0 170 50.0
Medtr4g017880 Medicago truncatula HOM05D005884 ORTHO05D007282 1.4e-28 130.6 117 66.7
PGSC0003DMG400028009 Solanum tuberosum HOM05D005884 ORTHO05D007282 1.8e-28 130.2 128 63.3
Glyma.03G080200 Glycine max HOM05D005884 ORTHO05D007282 4.0e-28 129.0 199 50.3
arahy.Tifrunner.gnm1.ann1.C60K2U Arachis hypogaea HOM05D005884 ORTHO05D007282 6.8e-28 128.3 200 51.0
RcHm_v2.0_Chr6g0285061 Rosa chinensis HOM05D005884 ORTHO05D007282 8.8e-28 127.9 158 52.5
CAN.G122.4 Capsicum annuum HOM05D005884 ORTHO05D007282 1.2e-27 127.5 101 71.3
Sopen09g024260 Solanum pennellii HOM05D005884 ORTHO05D007282 1.2e-27 127.5 128 59.4
Hund18350 Selenicereus undatus HOM05D005884 ORTHO05D007282 1.5e-27 127.1 163 53.4
MSTRG.18383 Avicennia marina HOM05D005884 ORTHO05D007282 3.4e-27 125.9 168 50.6
FAN24G3425 Fragaria x ananassa HOM05D005884 ORTHO05D007282 3.4e-27 125.9 157 52.2
FAN27G0062 Fragaria x ananassa HOM05D005884 ORTHO05D007282 3.4e-27 125.9 172 50.6
Glyma.18G149300 Glycine max HOM05D005884 ORTHO05D007282 3.4e-27 125.9 140 60.7
FvH4_2g19250 Fragaria vesca HOM05D005884 ORTHO05D007282 4.4e-27 125.6 156 52.6
Solyc09g061440.4 Solanum lycopersicum HOM05D005884 ORTHO05D007282 5.7e-27 125.2 128 57.8
Lj2A1133T33 Lonicera japonica HOM05D005884 ORTHO05D007282 7.5e-27 124.8 116 64.7
Cfa002560 Carpinus fangiana HOM05D005884 ORTHO05D007282 9.8e-27 124.4 97 69.1
Haze_24787 Corylus avellana HOM05D005884 ORTHO05D007282 9.8e-27 124.4 97 69.1
FAN15G1595 Fragaria x ananassa HOM05D005884 ORTHO05D007282 9.8e-27 124.4 159 51.6
ClCG09G009110 Citrullus lanatus HOM05D005884 ORTHO05D007282 6.3e-26 121.7 185 49.7
MELO3C012764.2 Cucumis melo HOM05D005884 ORTHO05D007282 4.1e-25 119.0 170 48.8
Gorai.009G365800 Gossypium raimondii HOM05D005884 ORTHO05D007282 5.4e-25 118.6 116 62.1
Prupe.8G204400 Prunus persica HOM05D005884 ORTHO05D007282 5.4e-25 118.6 156 51.9
CsaV3_7G025830 Cucumis sativus L. HOM05D005884 ORTHO05D007282 7.0e-25 118.2 191 45.5
PSO063G4085 Papaver somniferum HOM05D005884 ORTHO05D007282 1.2e-24 117.5 165 50.9
MBI07_g23671_MAGBIO Magnolia biondii HOM05D005884 ORTHO05D007282 1.6e-24 117.1 149 52.3
SalBow4G1286 Salvia bowleyana HOM05D005884 ORTHO05D007282 1.6e-24 117.1 151 54.3
TAR633G1722 Trochodendron aralioides HOM05D005884 ORTHO05D007282 2.7e-24 116.3 114 61.4
CANSAT01G0442 Cannabis sativa HOM05D005884 ORTHO05D007282 3.5e-24 115.9 194 43.8
AUR62031836 Chenopodium quinoa HOM05D005884 ORTHO05D007282 5.9e-24 115.2 160 53.1
PSO017G2163 Papaver somniferum HOM05D005884 ORTHO05D007282 5.9e-24 115.2 110 61.8
FAN15G1921 Fragaria x ananassa HOM05D005884 ORTHO05D007282 7.8e-24 114.8 203 41.9
Sp7g10660 Schrenkiella parvula HOM05D005884 ORTHO05D007282 1.0e-23 114.4 161 46.6
AUR62008873 Chenopodium quinoa HOM05D005884 ORTHO05D007282 1.3e-23 114.0 130 60.0
BcaB03g16138 Brassica carinata HOM05D005884 ORTHO05D007282 1.7e-23 113.6 151 51.0
HPP92_022492 Vanilla planifolia HOM05D005884 ORTHO05D007282 3.8e-23 112.5 157 48.4
Migut.N02263 Erythranthe guttata HOM05D005884 ORTHO05D007282 5.0e-23 112.1 170 46.5
Thhalv10026263m.g Eutrema salsugineum HOM05D005884 ORTHO05D007282 5.0e-23 112.1 149 49.0
Ah.08g213990 Amaranthus hybridus HOM05D005884 ORTHO05D007282 8.6e-23 111.3 141 52.5
EL10Ac7g17785 Beta vulgaris HOM05D005884 ORTHO05D007282 8.6e-23 111.3 171 49.7
A04p08870 Brassica napus HOM05D005884 ORTHO05D007282 3.3e-22 109.4 112 58.9
BraA04t16580Z Brassica rapa HOM05D005884 ORTHO05D007282 5.6e-22 108.6 114 58.8
TPR.G8219 Trifolium pratense HOM05D005884 ORTHO05D007282 5.6e-22 108.6 172 49.4
Carub.0007s2947 Capsella rubella HOM05D005884 ORTHO05D007282 9.5e-22 107.8 144 48.6
BcaC02g09439 Brassica carinata HOM05D005884 ORTHO05D007282 1.2e-21 107.5 119 56.3
BolC4t25837H Brassica oleracea HOM05D005884 ORTHO05D007282 1.2e-21 107.5 119 56.3
ATR0736G055 Amborella trichopoda HOM05D005884 ORTHO05D007282 1.6e-21 107.1 162 47.5
SGA_v2.0_scaffold8G04650 Striga asiatica HOM05D005884 ORTHO05D007282 2.1e-21 106.7 172 48.8
Sed0001531 Sechium edule HOM05D005884 ORTHO05D007282 3.6e-21 105.9 187 44.4
Gohir.A09G200610 Gossypium hirsutum HOM05D005884 ORTHO05D007282 2.3e-20 103.2 105 61.9
TAR194G0001 Trochodendron aralioides HOM05D005884 ORTHO05D004773 5.2e-20 102.1 113 55.8
VMungo0331G1358 Vigna mungo HOM05D005884 ORTHO05D007282 6.8e-20 101.7 122 54.9
MD10G1165900 Malus domestica HOM05D005884 ORTHO05D007282 2.0e-19 100.1 118 51.7
unitig_22.g6325 Utricularia gibba HOM05D005884 ORTHO05D007282 5.7e-19 98.6 122 52.5
SEGI_25444 Sequoiadendron giganteum HOM05D005884 ORTHO05D007282 1.3e-18 97.4 74 67.6
MSTRG.17548 Avicennia marina HOM05D005884 ORTHO05D007282 1.7e-18 97.1 164 45.7
C04p42740 Brassica napus HOM05D005884 ORTHO05D007282 1.7e-18 97.1 114 54.4
MBI10_g44186_MAGBIO Magnolia biondii HOM05D005884 ORTHO05D007282 1.7e-18 97.1 164 47.0
CDE02G3372 Ceratophyllum demersum HOM05D005884 ORTHO05D007282 2.9e-18 96.3 167 44.9
Os04g0513000 Oryza sativa ssp. japonica HOM05D005884 ORTHO05D007282 4.9e-18 95.5 76 65.8
Zm00001eb426500 Zea mays HOM05D005884 ORTHO05D007282 9.2e-17 91.3 142 45.8
CARHR218670 Cardamine hirsuta HOM05D005884 ORTHO05D007282 1.6e-16 90.5 113 46.0
THA.LOC104804605 Tarenaya hassleriana HOM05D005884 ORTHO05D007282 4.6e-16 89.0 100 56.0
Aa31LG9G4610 Aethionema arabicum HOM05D005884 ORTHO05D007282 2.3e-15 86.7 128 45.3
MBI06_g14323_MAGBIO Magnolia biondii HOM05D005884 ORTHO05D007282 6.6e-15 85.1 96 50.0
Mapoly0028s0026 Marchantia polymorpha HOM05D005884 ORTHO05D007282 6.6e-15 85.1 168 39.9
Atru.chr3.3178 Acer truncatum HOM05D005884 ORTHO05D007282 2.5e-14 83.2 64 65.6
AT4G13200 Arabidopsis thaliana HOM05D005884 ORTHO05D007282 2.5e-14 83.2 124 44.4
THA.LOC104808781 Tarenaya hassleriana HOM05D005884 ORTHO05D007282 2.1e-13 80.1 162 43.8
SalBow2G0198 Salvia bowleyana HOM05D005884 ORTHO05D007282 8.0e-13 78.2 146 43.8
AL9U10790 Arabidopsis lyrata HOM05D005884 ORTHO05D007282 1.8e-12 77.0 157 39.5
AagrBONN_evm.TU.Sc2ySwM_228.3174 Anthoceros agrestis HOM05D005884 ORTHO05D007282 5.8e-11 72.0 69 56.5
Gohir.A03G143925 Gossypium hirsutum HOM05D005884 ORTHO05D007282 5.8e-11 72.0 87 55.2
Gorai.001G128300 Gossypium raimondii HOM05D005884 ORTHO05D007282 5.8e-11 72.0 87 55.2
Gorai.001G116800 Gossypium raimondii HOM05D005884 ORTHO05D007282 9.8e-11 71.2 85 56.5
Gorai.002G226800 Gossypium raimondii HOM05D005884 ORTHO05D007282 9.8e-11 71.2 85 56.5
Sed0008993 Sechium edule HOM05D005884 ORTHO05D007282 6.4e-10 68.6 98 49.0
Pp3c5_25810 Physcomitrium patens HOM05D005884 ORTHO05D007282 8.3e-10 68.2 127 40.9
MCO02G464 Micromonas commoda HOM05D005884 ORTHO05D007282 5.4e-09 65.5 71 50.7


User provided reference genes

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